BLASTX nr result

ID: Bupleurum21_contig00023575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023575
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323884.1| predicted protein [Populus trichocarpa] gi|1...   138   8e-31
ref|XP_004140883.1| PREDICTED: uncharacterized protein LOC101203...   136   3e-30
ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241...   135   5e-30
ref|XP_002284184.1| PREDICTED: uncharacterized protein LOC100262...   131   1e-28
ref|XP_002526069.1| ubiquitin-protein ligase, putative [Ricinus ...   131   1e-28

>ref|XP_002323884.1| predicted protein [Populus trichocarpa] gi|118481933|gb|ABK92900.1|
           unknown [Populus trichocarpa]
           gi|222866886|gb|EEF04017.1| predicted protein [Populus
           trichocarpa]
          Length = 267

 Score =  138 bits (347), Expect = 8e-31
 Identities = 78/168 (46%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
 Frame = -2

Query: 595 HLLTLRLVYKGNLKFPSKNYFLLWIIENLNHDRIKFSTVFEEHRELVCASRGTSFIGRDP 416
           +LL+ RLVY+GNLKFP KNYFLLW++E+ N DR K    F E ++   +S     +G   
Sbjct: 100 NLLSFRLVYRGNLKFPRKNYFLLWMVESKNGDREKSHGTFCEDQQPHWSSDSNLALGNQA 159

Query: 415 TTTNIRRSPSL--GQPGSNNNGRNSVTSFLRLERPRT-FHKSLDFFIHLMLKTXXXXXXX 245
           +  NIRR   +   +P   N+  N V S+L + R  +   KSL FF+HL  K        
Sbjct: 160 SRGNIRRGQYVHHAEPSEANHDHNHVNSYLNVRRIHSSLQKSLVFFVHLTAKFPLVIIFL 219

Query: 244 XXXXXXIPASFAILVLYLVITVVFAVPSFLVLYFAYPLLDWLAREFAT 101
                 IPAS AIL LY++ITV+FA+PSFL+LYFAYP LDWL RE  T
Sbjct: 220 LIILYAIPASAAILALYILITVLFALPSFLILYFAYPSLDWLVREIIT 267


>ref|XP_004140883.1| PREDICTED: uncharacterized protein LOC101203968 isoform 1 [Cucumis
           sativus] gi|449446249|ref|XP_004140884.1| PREDICTED:
           uncharacterized protein LOC101203968 isoform 2 [Cucumis
           sativus] gi|449499448|ref|XP_004160820.1| PREDICTED:
           uncharacterized LOC101203968 isoform 1 [Cucumis sativus]
           gi|449499451|ref|XP_004160821.1| PREDICTED:
           uncharacterized LOC101203968 isoform 2 [Cucumis sativus]
          Length = 265

 Score =  136 bits (342), Expect = 3e-30
 Identities = 79/167 (47%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
 Frame = -2

Query: 595 HLLTLRLVYKGNLKFPSKNYFLLWIIENLNHDRIKFSTVFEEHRELVCASRGTSFIGRDP 416
           +LL+ RLVYKGNLKFP KNYFLLW++EN+N +R+K  + F    +LV    GTS  G   
Sbjct: 100 NLLSFRLVYKGNLKFPCKNYFLLWMVENINVERVKSHSAFSGD-QLVFPVSGTSSRGNQV 158

Query: 415 TTTNIRRSPSLGQPGSNN-NGRNSVTSFLRLERPRT-FHKSLDFFIHLMLKTXXXXXXXX 242
           +  N+RR   + Q  S   N  NS      LER ++   K L FF+HL  K         
Sbjct: 159 SHNNLRRGHHVRQLDSQGPNNANSHFHSFNLERLQSSLRKLLVFFVHLTAKFPLVIIFLL 218

Query: 241 XXXXXIPASFAILVLYLVITVVFAVPSFLVLYFAYPLLDWLAREFAT 101
                +PAS AIL LY+++TV+FA+PSFL+LYFAYP LDWL RE  T
Sbjct: 219 IVLYAVPASAAILALYVLVTVLFALPSFLILYFAYPSLDWLMREIIT 265


>ref|XP_002284521.1| PREDICTED: uncharacterized protein LOC100241642 [Vitis vinifera]
          Length = 268

 Score =  135 bits (340), Expect = 5e-30
 Identities = 79/169 (46%), Positives = 104/169 (61%), Gaps = 4/169 (2%)
 Frame = -2

Query: 595 HLLTLRLVYKGNLKFPSKNYFLLWIIENLNHDRIKFSTVFEEHRELVCASRGTSFIGRDP 416
           +LL+ RLVYKGNL FP KN+FLLW++E++N DR K  + F +H+    ++R    IG   
Sbjct: 101 NLLSFRLVYKGNLTFPRKNFFLLWMVESMNGDRGKSHSSFCDHQPGWSSNRNL-IIGNQG 159

Query: 415 TTTNIRRSPSLGQPG---SNNNGRNSVTSFLRLERPR-TFHKSLDFFIHLMLKTXXXXXX 248
           +  N RR P    P    SN++G + +  FL +ER   +  KSL FF+HL  K       
Sbjct: 160 SHVNHRRPPYSHLPEQSESNHDGGHLINRFLNIERLHLSVRKSLVFFVHLTAKFPLVIIF 219

Query: 247 XXXXXXXIPASFAILVLYLVITVVFAVPSFLVLYFAYPLLDWLAREFAT 101
                  IPAS AIL LY++ITV+FA+PSFL+LYFAYP LDWL RE  T
Sbjct: 220 LLIVLYAIPASAAILALYILITVLFALPSFLILYFAYPSLDWLVREIIT 268


>ref|XP_002284184.1| PREDICTED: uncharacterized protein LOC100262874 [Vitis vinifera]
          Length = 269

 Score =  131 bits (329), Expect = 1e-28
 Identities = 77/169 (45%), Positives = 102/169 (60%), Gaps = 4/169 (2%)
 Frame = -2

Query: 595 HLLTLRLVYKGNLKFPSKNYFLLWIIENLNHDRIKFSTVFE-EHRELVCASRGTSFIGRD 419
           +LL+ RLVYKG+LKFP KNYFLLW++E++N DR K  + F  +H + V +S     +G  
Sbjct: 101 NLLSFRLVYKGSLKFPRKNYFLLWMLESMNGDREKSHSSFSGDHHQPVWSSDSNLALGSQ 160

Query: 418 PTTTNIRRSPSLGQ--PGSNNNGRNSVTSFLRLERPRT-FHKSLDFFIHLMLKTXXXXXX 248
                +RR   +    P  +N+    V ++L LER  +  HKSL FF+ L  K       
Sbjct: 161 VNHRILRREQFIHHSGPSGSNHEDGHVNNYLTLERLHSSLHKSLVFFVQLTAKFPLVVIL 220

Query: 247 XXXXXXXIPASFAILVLYLVITVVFAVPSFLVLYFAYPLLDWLAREFAT 101
                  IPAS AIL LY++ITV+FA+PS L+LYFAYP LDWLARE  T
Sbjct: 221 LLIVLYAIPASAAILALYILITVLFALPSVLMLYFAYPSLDWLAREIIT 269


>ref|XP_002526069.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534566|gb|EEF36263.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 264

 Score =  131 bits (329), Expect = 1e-28
 Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
 Frame = -2

Query: 595 HLLTLRLVYKGNLKFPSKNYFLLWIIENLNHDRIKF-STVFEEHRELVCASRGTSFIGRD 419
           +LL+ RLVY+GNLKFP KNYFLLW++E+ N D  K  +T++E+H+ L  +    S  G  
Sbjct: 100 NLLSFRLVYRGNLKFPRKNYFLLWMVESKNEDGHKCQNTLYEDHQPLWSSDNNLSS-GNQ 158

Query: 418 PTTTNIRRSPSLGQPGSNNNGRNSVTSFLRLERPRT-FHKSLDFFIHLMLKTXXXXXXXX 242
            + +NIRR     +P   N+  N+    L + R  +   KSL FF+HL  K         
Sbjct: 159 LSRSNIRREHH-SEPSGVNHDHNNGNILLNMGRIHSSLQKSLVFFVHLTAKFPLVIIFLL 217

Query: 241 XXXXXIPASFAILVLYLVITVVFAVPSFLVLYFAYPLLDWLAREFAT 101
                IPAS AIL LY++ITV+FA+PSFL+LYFAYP LDWL RE  T
Sbjct: 218 IILYAIPASAAILALYILITVLFALPSFLILYFAYPSLDWLFREIIT 264


Top