BLASTX nr result

ID: Bupleurum21_contig00023565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023565
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     124   6e-27
emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera]   123   1e-26
emb|CAN79539.1| hypothetical protein VITISV_011362 [Vitis vinifera]   122   3e-26
emb|CAN75043.1| hypothetical protein VITISV_042110 [Vitis vinifera]   122   3e-26
emb|CAN69792.1| hypothetical protein VITISV_044000 [Vitis vinifera]   121   5e-26

>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/115 (46%), Positives = 77/115 (66%)
 Frame = -2

Query: 346  DKNEAKKLRERAASYCVVDGKLYKRSYMGPLLKCVSPREALVALEEVHEGICGEHQGSKA 167
            D++ ++K++  AA Y V +G+LY+RS + PLLKCV P +A + L E+H+GICG H G++ 
Sbjct: 913  DRSLSQKIKRIAARYLVFEGELYRRSVIRPLLKCVGPADAGLILTEIHDGICGHHMGART 972

Query: 166  LCLKIMRQGFFWPTMRAQCEDYVKKCRACQMYARVSHRPAHDLTSITSPIPFYMW 2
            L  K +R G+FWPTM        KKC+ CQM+A V H P+ DL  + SP+PF  W
Sbjct: 973  LADKALRAGYFWPTMLEDSRAKTKKCKNCQMHAPVIHAPSRDLQPVLSPLPFAQW 1027


>emb|CAN75172.1| hypothetical protein VITISV_033306 [Vitis vinifera]
          Length = 973

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/115 (46%), Positives = 73/115 (63%)
 Frame = -2

Query: 346 DKNEAKKLRERAASYCVVDGKLYKRSYMGPLLKCVSPREALVALEEVHEGICGEHQGSKA 167
           D  +A K+R +AA + ++ G LYKRS+ GP L+C+S  EAL  L E+HEG+CG H G ++
Sbjct: 579 DPKQAHKIRVQAARFTLIGGHLYKRSFTGPYLRCLSHSEALYVLAELHEGVCGNHSGGRS 638

Query: 166 LCLKIMRQGFFWPTMRAQCEDYVKKCRACQMYARVSHRPAHDLTSITSPIPFYMW 2
           L  +   QG++WPTM+     YVKKC  CQ YA + H P+  L  I+ P PF  W
Sbjct: 639 LAHRAHSQGYYWPTMKKDAAAYVKKCDKCQRYAPIPHMPSETLKPISGPWPFAQW 693


>emb|CAN79539.1| hypothetical protein VITISV_011362 [Vitis vinifera]
          Length = 844

 Score =  122 bits (306), Expect = 3e-26
 Identities = 53/115 (46%), Positives = 73/115 (63%)
 Frame = -2

Query: 346 DKNEAKKLRERAASYCVVDGKLYKRSYMGPLLKCVSPREALVALEEVHEGICGEHQGSKA 167
           D  +A K+R +AA + ++ G LYKRS+ GP L+C+   EA   L E+HEGICG H G ++
Sbjct: 472 DPKQAHKIRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEAQYVLAELHEGICGNHSGGRS 531

Query: 166 LCLKIMRQGFFWPTMRAQCEDYVKKCRACQMYARVSHRPAHDLTSITSPIPFYMW 2
           L  +   QG++WPTM+     YVKKC  CQ YA + H P+  L S++SP PF  W
Sbjct: 532 LAHRAHSQGYYWPTMKKDAAAYVKKCDKCQRYALIPHMPSATLKSVSSPWPFAQW 586


>emb|CAN75043.1| hypothetical protein VITISV_042110 [Vitis vinifera]
          Length = 536

 Score =  122 bits (306), Expect = 3e-26
 Identities = 53/115 (46%), Positives = 73/115 (63%)
 Frame = -2

Query: 346 DKNEAKKLRERAASYCVVDGKLYKRSYMGPLLKCVSPREALVALEEVHEGICGEHQGSKA 167
           D  +A K+R +AA + +++G LYKRS+ GP L+C+   EA   L E+HEGICG H G ++
Sbjct: 188 DPKQAHKIRVQAARFTLIEGHLYKRSFTGPYLRCLGHSEAQYVLAELHEGICGNHSGGRS 247

Query: 166 LCLKIMRQGFFWPTMRAQCEDYVKKCRACQMYARVSHRPAHDLTSITSPIPFYMW 2
           L  +   QG++WPTM+     YVKKC  CQ YA + H P+  L SI+ P PF  W
Sbjct: 248 LAHRAHSQGYYWPTMKKDAAAYVKKCDKCQRYAPIPHMPSATLKSISGPWPFAQW 302


>emb|CAN69792.1| hypothetical protein VITISV_044000 [Vitis vinifera]
          Length = 978

 Score =  121 bits (304), Expect = 5e-26
 Identities = 52/115 (45%), Positives = 73/115 (63%)
 Frame = -2

Query: 346 DKNEAKKLRERAASYCVVDGKLYKRSYMGPLLKCVSPREALVALEEVHEGICGEHQGSKA 167
           D  +A K+R RAA + ++ G LYKRS+ GP L+C++  EAL  L E+HEG+CG H G ++
Sbjct: 598 DPKQAHKIRVRAARFTLIGGHLYKRSFXGPYLRCLNHSEALYVLAELHEGVCGNHSGGRS 657

Query: 166 LCLKIMRQGFFWPTMRAQCEDYVKKCRACQMYARVSHRPAHDLTSITSPIPFYMW 2
           L  +   QG++WPTM+     YVKKC  CQ +A + H P+  L  I+ P PF  W
Sbjct: 658 LAHRAHSQGYYWPTMKNDAAAYVKKCDKCQRHAPIPHMPSETLKPISGPWPFAQW 712


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