BLASTX nr result

ID: Bupleurum21_contig00023564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023564
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66509.1| hypothetical protein VITISV_003619 [Vitis vinifera]   191   1e-46
emb|CBI33674.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_002283463.1| PREDICTED: uncharacterized protein LOC100242...   187   2e-45
ref|XP_002516743.1| conserved hypothetical protein [Ricinus comm...   182   3e-44
ref|XP_002329277.1| predicted protein [Populus trichocarpa] gi|2...   178   6e-43

>emb|CAN66509.1| hypothetical protein VITISV_003619 [Vitis vinifera]
          Length = 585

 Score =  191 bits (484), Expect = 1e-46
 Identities = 97/157 (61%), Positives = 111/157 (70%)
 Frame = -3

Query: 555 MEVGRGGRSLMRXXXXXXXXXXXXXLGLATWSIDKYIDGEQDHPHLGGNPSTSFMLIFAL 376
           M  GRGGRSLM              LGLA WS+DKYIDGEQ+HPHLGGNPSTSFMLIFAL
Sbjct: 426 MATGRGGRSLMGPLLAVNFVVYLIILGLAGWSLDKYIDGEQNHPHLGGNPSTSFMLIFAL 485

Query: 375 IAGAIGECSVVIGFTHLQAWRSDSLXXXXXXXXXXXXXTVLAFGLVCKEVIMGGHRGKRL 196
           IAG  G C VV GF H +AW SDSL             T LA GLVCKE+I+GG+RGKRL
Sbjct: 486 IAGVTGACCVVAGFLHYKAWTSDSLAAAASSAIISWAITALAIGLVCKEIILGGYRGKRL 545

Query: 195 QTLEAFITISAVSQLMYVLLLHAGMFNSRFGPNYGSS 85
           QTLEA I +S VSQL+Y++LLHAG+++ R+GP Y SS
Sbjct: 546 QTLEALIIVSTVSQLLYLVLLHAGLWSRRYGPGYRSS 582


>emb|CBI33674.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  187 bits (474), Expect = 2e-45
 Identities = 96/157 (61%), Positives = 110/157 (70%)
 Frame = -3

Query: 555 MEVGRGGRSLMRXXXXXXXXXXXXXLGLATWSIDKYIDGEQDHPHLGGNPSTSFMLIFAL 376
           M  GRGGRSLM              LGLA WS+DKYIDGEQ+HPHLGGNPSTSFMLIFAL
Sbjct: 23  MATGRGGRSLMGPLLAVNFVVYLIILGLAGWSLDKYIDGEQNHPHLGGNPSTSFMLIFAL 82

Query: 375 IAGAIGECSVVIGFTHLQAWRSDSLXXXXXXXXXXXXXTVLAFGLVCKEVIMGGHRGKRL 196
           IAG  G C VV  F H +AW SDSL             T LA GLVCKE+I+GG+RGKRL
Sbjct: 83  IAGVTGACCVVAEFLHYKAWTSDSLAAAASSAIISWAITALAAGLVCKEIILGGYRGKRL 142

Query: 195 QTLEAFITISAVSQLMYVLLLHAGMFNSRFGPNYGSS 85
           QTLEA I +S VSQL+Y++LLHAG+++ R+GP Y SS
Sbjct: 143 QTLEALIIVSTVSQLLYLVLLHAGLWSRRYGPGYRSS 179


>ref|XP_002283463.1| PREDICTED: uncharacterized protein LOC100242900 [Vitis vinifera]
          Length = 160

 Score =  187 bits (474), Expect = 2e-45
 Identities = 96/157 (61%), Positives = 110/157 (70%)
 Frame = -3

Query: 555 MEVGRGGRSLMRXXXXXXXXXXXXXLGLATWSIDKYIDGEQDHPHLGGNPSTSFMLIFAL 376
           M  GRGGRSLM              LGLA WS+DKYIDGEQ+HPHLGGNPSTSFMLIFAL
Sbjct: 1   MATGRGGRSLMGPLLAVNFVVYLIILGLAGWSLDKYIDGEQNHPHLGGNPSTSFMLIFAL 60

Query: 375 IAGAIGECSVVIGFTHLQAWRSDSLXXXXXXXXXXXXXTVLAFGLVCKEVIMGGHRGKRL 196
           IAG  G C VV  F H +AW SDSL             T LA GLVCKE+I+GG+RGKRL
Sbjct: 61  IAGVTGACCVVAEFLHYKAWTSDSLAAAASSAIISWAITALAAGLVCKEIILGGYRGKRL 120

Query: 195 QTLEAFITISAVSQLMYVLLLHAGMFNSRFGPNYGSS 85
           QTLEA I +S VSQL+Y++LLHAG+++ R+GP Y SS
Sbjct: 121 QTLEALIIVSTVSQLLYLVLLHAGLWSRRYGPGYRSS 157


>ref|XP_002516743.1| conserved hypothetical protein [Ricinus communis]
           gi|223544116|gb|EEF45641.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 180

 Score =  182 bits (463), Expect = 3e-44
 Identities = 90/154 (58%), Positives = 109/154 (70%)
 Frame = -3

Query: 555 MEVGRGGRSLMRXXXXXXXXXXXXXLGLATWSIDKYIDGEQDHPHLGGNPSTSFMLIFAL 376
           M  GR  R L+              LGLA WS+DKYIDG+QDHPHLGGNPSTSFML++AL
Sbjct: 1   MAPGRVQRDLIGPLLAVNLIVHLIVLGLAGWSLDKYIDGQQDHPHLGGNPSTSFMLVYAL 60

Query: 375 IAGAIGECSVVIGFTHLQAWRSDSLXXXXXXXXXXXXXTVLAFGLVCKEVIMGGHRGKRL 196
           IAG IG  SV+IG  H ++WRSDSL               LAFGLVC+++I+GGHRGKRL
Sbjct: 61  IAGVIGASSVLIGILHFRSWRSDSLASATSLAINSWAIAALAFGLVCQQIILGGHRGKRL 120

Query: 195 QTLEAFITISAVSQLMYVLLLHAGMFNSRFGPNY 94
           +TLEA IT+S +SQL+Y+LLLHAGMFN R+GP +
Sbjct: 121 KTLEALITVSFLSQLLYLLLLHAGMFNPRYGPGF 154


>ref|XP_002329277.1| predicted protein [Populus trichocarpa] gi|222870731|gb|EEF07862.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  178 bits (452), Expect = 6e-43
 Identities = 89/161 (55%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
 Frame = -3

Query: 555 MEVGRGGRSLMRXXXXXXXXXXXXXLGLATWSIDKYIDGEQDHPHLGGNPSTSFMLIFAL 376
           M VGR  + L+              LGLA WS+DKYI+GEQ+HPHLGGNP+TSFMLI+AL
Sbjct: 1   MAVGRDSKDLIGPLLAVNLVFYLIVLGLAGWSVDKYINGEQNHPHLGGNPATSFMLIYAL 60

Query: 375 IAGAIGECSVVIGFTHLQAWRSDSLXXXXXXXXXXXXXTVLAFGLVCKEVIMGGHRGKRL 196
           ++G IG  S+++GF HL+AWR+DSL             T LAFG  CK++++GGHRGKRL
Sbjct: 61  LSGVIGASSMLVGFVHLRAWRNDSLASASAMAIISWAITALAFGFECKQILLGGHRGKRL 120

Query: 195 QTLEAFITISAVSQLMYVLLLHAGMFNSRFGP---NYGSSS 82
           +TLEA I IS +SQ +YV+LLHAG F SR+GP   NYGS S
Sbjct: 121 KTLEALIIISLLSQFLYVVLLHAGFFRSRYGPGYHNYGSDS 161


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