BLASTX nr result

ID: Bupleurum21_contig00023560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023560
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603108.1| Protein EARLY FLOWERING [Medicago truncatula...   116   3e-24
ref|XP_002516480.1| conserved hypothetical protein [Ricinus comm...   115   8e-24
emb|CBI20609.3| unnamed protein product [Vitis vinifera]              111   8e-23
ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [V...   111   8e-23
emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera]   111   8e-23

>ref|XP_003603108.1| Protein EARLY FLOWERING [Medicago truncatula]
            gi|355492156|gb|AES73359.1| Protein EARLY FLOWERING
            [Medicago truncatula]
          Length = 688

 Score =  116 bits (290), Expect = 3e-24
 Identities = 76/161 (47%), Positives = 93/161 (57%), Gaps = 25/161 (15%)
 Frame = -2

Query: 537  PTGHGYFPPFG-MPVMHPPFVGSM-EHMDHYNAQ----------------NQSSCSVSGQ 412
            P  H Y+PP+G MP M      S+ EH++ ++A+                NQSSC++  Q
Sbjct: 526  PGSHAYYPPYGSMPFMKAAASESVVEHVNQFSARVQSRHLSEGEADCNKHNQSSCNLPVQ 585

Query: 411  NNGHNPKAVNLNPSKHVDVQLSTASSPSVRIQ-RSIIHNEERSDALPLFPTSPVTNAGVD 235
             NG     ++   SK  ++Q+STASSPS   Q  S     E  DALPLFP  PV   GV 
Sbjct: 586  RNGATTHVMHHQRSKEFELQMSTASSPSEMTQGMSTGQVAEERDALPLFPMVPVEPEGVA 645

Query: 234  RS------TRVIKVVPHNARSATESVARIFQSIQEERKQHD 130
            +S      TRVIKVVPHN RSATES ARIFQSIQEERKQ+D
Sbjct: 646  QSIETGQQTRVIKVVPHNRRSATESAARIFQSIQEERKQYD 686


>ref|XP_002516480.1| conserved hypothetical protein [Ricinus communis]
            gi|223544300|gb|EEF45821.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 720

 Score =  115 bits (287), Expect = 8e-24
 Identities = 71/154 (46%), Positives = 90/154 (58%), Gaps = 18/154 (11%)
 Frame = -2

Query: 531  GHGYFPPFGMPVMHPPFVGS-MEHMDHYNAQNQSSC----------SVSGQNNGHNPKAV 385
            GHGYFPP+GMP+M     GS +E M++Y    Q S           S+  Q +G  P+  
Sbjct: 567  GHGYFPPYGMPIMSSTMPGSAVEQMNYYGQAGQLSGGGANIVVQHPSLQLQKSGSIPRVN 626

Query: 384  NLNPSKHVDVQLSTASSPSVRIQRS-IIHNEERSDALPLFPTSPVTNAGV------DRST 226
                SK  +++ STASSPS R+Q +      E  D LPLFPT+P+   G       ++  
Sbjct: 627  KPRASKDTELRGSTASSPSERVQGAGNAQAAETRDPLPLFPTAPIALEGATQPQLTNQPR 686

Query: 225  RVIKVVPHNARSATESVARIFQSIQEERKQHDDV 124
             VIKVVPHN RSATES ARIFQSIQEERKQ+D +
Sbjct: 687  GVIKVVPHNRRSATESAARIFQSIQEERKQNDTI 720


>emb|CBI20609.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  111 bits (278), Expect = 8e-23
 Identities = 76/165 (46%), Positives = 90/165 (54%), Gaps = 29/165 (17%)
 Frame = -2

Query: 537 PTGHGYFPPFGMPVM-HPPFVGS-MEHMDHY-------------------NAQNQSSCSV 421
           P GHGYFPP+GM VM HP   GS +E M+ +                   N Q+Q+SC+V
Sbjct: 506 PIGHGYFPPYGMSVMNHPTISGSAVEQMNRFAGHGSLSQSGQLSGGGASFNMQHQNSCNV 565

Query: 420 SGQNNGHNPKAVNLNPSKHVDVQLSTASSPSVRIQR-SIIHNEERSDALPLFPTSPVTNA 244
                   P+ V    SK  + Q STASSPS R Q+       E  D LPLFP +P    
Sbjct: 566 PTPKRAI-PQGVKFPMSKDSEFQGSTASSPSEREQQVGTGDTAEGRDPLPLFPMAPAAIP 624

Query: 243 -------GVDRSTRVIKVVPHNARSATESVARIFQSIQEERKQHD 130
                  G D+ TRVI+VVPHN RSATES ARIFQSIQ+ERKQ D
Sbjct: 625 AGDPQPNGTDQPTRVIRVVPHNPRSATESAARIFQSIQDERKQLD 669


>ref|XP_002278577.1| PREDICTED: protein EARLY FLOWERING 3-like [Vitis vinifera]
          Length = 725

 Score =  111 bits (278), Expect = 8e-23
 Identities = 76/165 (46%), Positives = 90/165 (54%), Gaps = 29/165 (17%)
 Frame = -2

Query: 537  PTGHGYFPPFGMPVM-HPPFVGS-MEHMDHY-------------------NAQNQSSCSV 421
            P GHGYFPP+GM VM HP   GS +E M+ +                   N Q+Q+SC+V
Sbjct: 560  PIGHGYFPPYGMSVMNHPTISGSAVEQMNRFAGHGSLSQSGQLSGGGASFNMQHQNSCNV 619

Query: 420  SGQNNGHNPKAVNLNPSKHVDVQLSTASSPSVRIQR-SIIHNEERSDALPLFPTSPVTNA 244
                    P+ V    SK  + Q STASSPS R Q+       E  D LPLFP +P    
Sbjct: 620  PTPKRAI-PQGVKFPMSKDSEFQGSTASSPSEREQQVGTGDTAEGRDPLPLFPMAPAAIP 678

Query: 243  -------GVDRSTRVIKVVPHNARSATESVARIFQSIQEERKQHD 130
                   G D+ TRVI+VVPHN RSATES ARIFQSIQ+ERKQ D
Sbjct: 679  AGDPQPNGTDQPTRVIRVVPHNPRSATESAARIFQSIQDERKQLD 723


>emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera]
          Length = 1138

 Score =  111 bits (278), Expect = 8e-23
 Identities = 76/165 (46%), Positives = 90/165 (54%), Gaps = 29/165 (17%)
 Frame = -2

Query: 537  PTGHGYFPPFGMPVM-HPPFVGS-MEHMDHY-------------------NAQNQSSCSV 421
            P GHGYFPP+GM VM HP   GS +E M+ +                   N Q+Q+SC+V
Sbjct: 973  PIGHGYFPPYGMSVMNHPTISGSAVEQMNRFAGHGSLSQSGQLSGGGASFNMQHQNSCNV 1032

Query: 420  SGQNNGHNPKAVNLNPSKHVDVQLSTASSPSVRIQR-SIIHNEERSDALPLFPTSPVTNA 244
                    P+ V    SK  + Q STASSPS R Q+       E  D LPLFP +P    
Sbjct: 1033 PTPKRAI-PQGVKFPMSKDSEFQGSTASSPSEREQQVGTGDTAEGRDPLPLFPMAPAAIP 1091

Query: 243  -------GVDRSTRVIKVVPHNARSATESVARIFQSIQEERKQHD 130
                   G D+ TRVI+VVPHN RSATES ARIFQSIQ+ERKQ D
Sbjct: 1092 AGDPQPNGTDQPTRVIRVVPHNPRSATESAARIFQSIQDERKQLD 1136


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