BLASTX nr result

ID: Bupleurum21_contig00023509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023509
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   162   4e-38
emb|CBI36805.3| unnamed protein product [Vitis vinifera]              162   4e-38
emb|CAN64388.1| hypothetical protein VITISV_029471 [Vitis vinifera]   162   4e-38
ref|XP_002328564.1| predicted protein [Populus trichocarpa] gi|2...   111   1e-22
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   108   6e-22

>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  162 bits (411), Expect = 4e-38
 Identities = 92/218 (42%), Positives = 136/218 (62%), Gaps = 6/218 (2%)
 Frame = +2

Query: 2    ESYEIDNQSRDPGQRTATIDFSEIEADSGSDDAKDPNDRWNDARRNTSPRNMKTPKPRHR 181
            ++YE++  S +P Q+T++IDFSE+E  SGS+D +  ++ +    +  S +  K+ +P HR
Sbjct: 1708 DNYELETSSSNPAQKTSSIDFSELEEYSGSEDIEGFDENFPGRHQTKSSKYNKSSRPIHR 1767

Query: 182  NASFSGSEADELDFDSDQDIPVHPNWKSSHVANSHRRPRGGAAN----KFDSDEDIGLSS 349
             A+ SG E DELD DSD+++ V+P WKSSHVA+S +R RG         F SDE++GL S
Sbjct: 1768 KAALSGIEDDELDLDSDEELSVNPKWKSSHVADSRQRGRGATGPSRGLSFGSDEELGLGS 1827

Query: 350  GSEDD--ENFRSRNKRGNKRDSSRRDFGRRAIPNSEDFSGFESDGEDTRSHRGRGTKTSF 523
            G++DD  E+F S++KR NK  S RRD  R    ++ED    ES+ +D RS+R R  K + 
Sbjct: 1828 GTDDDLGEDFGSQSKR-NKLGSGRRDRWRGG-SDTEDGHFSESNDDDPRSYRSRANKAAP 1885

Query: 524  DRRKNMSMGRGSFNGSERSGFKSRGMTGDRYSPSRDNF 637
             RR+N S GRG F+ +  S F+S    G R +   D+F
Sbjct: 1886 GRRQNNSRGRGDFDFTHDSKFRSNSARGGRRNSFNDDF 1923


>emb|CBI36805.3| unnamed protein product [Vitis vinifera]
          Length = 823

 Score =  162 bits (411), Expect = 4e-38
 Identities = 92/218 (42%), Positives = 136/218 (62%), Gaps = 6/218 (2%)
 Frame = +2

Query: 2    ESYEIDNQSRDPGQRTATIDFSEIEADSGSDDAKDPNDRWNDARRNTSPRNMKTPKPRHR 181
            ++YE++  S +P Q+T++IDFSE+E  SGS+D +  ++ +    +  S +  K+ +P HR
Sbjct: 533  DNYELETSSSNPAQKTSSIDFSELEEYSGSEDIEGFDENFPGRHQTKSSKYNKSSRPIHR 592

Query: 182  NASFSGSEADELDFDSDQDIPVHPNWKSSHVANSHRRPRGGAAN----KFDSDEDIGLSS 349
             A+ SG E DELD DSD+++ V+P WKSSHVA+S +R RG         F SDE++GL S
Sbjct: 593  KAALSGIEDDELDLDSDEELSVNPKWKSSHVADSRQRGRGATGPSRGLSFGSDEELGLGS 652

Query: 350  GSEDD--ENFRSRNKRGNKRDSSRRDFGRRAIPNSEDFSGFESDGEDTRSHRGRGTKTSF 523
            G++DD  E+F S++KR NK  S RRD  R    ++ED    ES+ +D RS+R R  K + 
Sbjct: 653  GTDDDLGEDFGSQSKR-NKLGSGRRDRWRGG-SDTEDGHFSESNDDDPRSYRSRANKAAP 710

Query: 524  DRRKNMSMGRGSFNGSERSGFKSRGMTGDRYSPSRDNF 637
             RR+N S GRG F+ +  S F+S    G R +   D+F
Sbjct: 711  GRRQNNSRGRGDFDFTHDSKFRSNSARGGRRNSFNDDF 748


>emb|CAN64388.1| hypothetical protein VITISV_029471 [Vitis vinifera]
          Length = 875

 Score =  162 bits (411), Expect = 4e-38
 Identities = 92/218 (42%), Positives = 136/218 (62%), Gaps = 6/218 (2%)
 Frame = +2

Query: 2    ESYEIDNQSRDPGQRTATIDFSEIEADSGSDDAKDPNDRWNDARRNTSPRNMKTPKPRHR 181
            ++YE++  S +P Q+T++IDFSE+E  SGS+D +  ++ +    +  S +  K+ +P HR
Sbjct: 581  DNYELETSSSNPAQKTSSIDFSELEEYSGSEDIEGFDENFPGRHQTKSSKYNKSSRPIHR 640

Query: 182  NASFSGSEADELDFDSDQDIPVHPNWKSSHVANSHRRPRGGAAN----KFDSDEDIGLSS 349
             A+ SG E DELD DSD+++ V+P WKSSHVA+S +R RG         F SDE++GL S
Sbjct: 641  KAALSGIEDDELDLDSDEELSVNPKWKSSHVADSRQRGRGATGPSRGLSFGSDEELGLGS 700

Query: 350  GSEDD--ENFRSRNKRGNKRDSSRRDFGRRAIPNSEDFSGFESDGEDTRSHRGRGTKTSF 523
            G++DD  E+F S++KR NK  S RRD  R    ++ED    ES+ +D RS+R R  K + 
Sbjct: 701  GTDDDLGEDFGSQSKR-NKLGSGRRDRWRGG-SDTEDGHFSESNDDDPRSYRSRANKAAP 758

Query: 524  DRRKNMSMGRGSFNGSERSGFKSRGMTGDRYSPSRDNF 637
             RR+N S GRG F+ +  S F+S    G R +   D+F
Sbjct: 759  GRRQNNSRGRGDFDFTHDSKFRSNSARGGRRNSLNDDF 796


>ref|XP_002328564.1| predicted protein [Populus trichocarpa] gi|222838279|gb|EEE76644.1|
            predicted protein [Populus trichocarpa]
          Length = 787

 Score =  111 bits (278), Expect = 1e-22
 Identities = 78/202 (38%), Positives = 105/202 (51%), Gaps = 9/202 (4%)
 Frame = +2

Query: 59   DFSEIEADSGSDDAKDPNDRWN-DARRNTSPRNMKTPKPRHRNASFSGSEADELDFDSDQ 235
            D  +I+ D GSD        +N   R  TSP ++K  KP+H   +FSGS+ DELD DSD+
Sbjct: 546  DEDDIDRDGGSD--------YNLGIRLRTSP-SVKPSKPKHHRRAFSGSD-DELDIDSDE 595

Query: 236  DIPVHPNWKSSHVANSHRRPRGGAAN------KFDSDEDIGLSSGSEDDENFRSRNKRGN 397
            +  VHP WKSSHVA+   + RGG          F SDE++ L S  +DD    S ++R  
Sbjct: 596  ERSVHPKWKSSHVADIRNKNRGGVPTGPSKGLSFGSDEELELDSDVDDDSG--SSHRRQG 653

Query: 398  KRDSSRRDFGRRAIPNSEDFSGFESDGEDTRSHRGR--GTKTSFDRRKNMSMGRGSFNGS 571
            ++ S RR+F R +  +   FSG ESD    RS R R  G K    RR N   GR   +  
Sbjct: 654  RKGSGRRNFERNSDLDDASFSGSESDNNHRRSWRNRSGGNKLESGRRGNHFRGR-DHDFV 712

Query: 572  ERSGFKSRGMTGDRYSPSRDNF 637
              +  +S+G  GDR     D+F
Sbjct: 713  RNNEMRSKGKMGDRRKSWGDDF 734


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score =  108 bits (271), Expect = 6e-22
 Identities = 69/220 (31%), Positives = 116/220 (52%), Gaps = 8/220 (3%)
 Frame = +2

Query: 2    ESYEIDNQSRDPGQRTATIDFSEIEADSGSDDAKDPNDRWNDARRNTSPRNMKTPKPRHR 181
            +SYE+D ++    + ++    S+ +  S  +D +D +D  +   R   P  +K  K   +
Sbjct: 1749 DSYELDTENNSSARNSSRNIISQ-QGTSAFEDDEDFDDNLHTHPRKNLPSYVKPSKSMRK 1807

Query: 182  NASFSGSEADELDFDSDQDIPVHPNWKSSHVANSHRRPRG----GAANK--FDSDEDIGL 343
             A+FSGS+ DEL+ DSD+++ V+P WKSSHVA++  + RG    G + +  F SDE+I L
Sbjct: 1808 RATFSGSQDDELEIDSDEELSVYPKWKSSHVADARHKNRGRSPAGPSRRLSFGSDEEIEL 1867

Query: 344  SSGSEDDENFRSRNKRGNKRDSSRRDFGRRAIPNSEDFSGFESDGED--TRSHRGRGTKT 517
               S+ DE+F S  ++GNK+   RR + R +   +  FSG ES+ +   +R  R    K 
Sbjct: 1868 D--SDGDEDFGSGQRKGNKQGLGRRSYQRSSGLRNASFSGSESEDDQLYSRGDRSGRNKM 1925

Query: 518  SFDRRKNMSMGRGSFNGSERSGFKSRGMTGDRYSPSRDNF 637
                R++   G G    +     + +G  GD+ +   D+F
Sbjct: 1926 EAGGRRDDFRGHGDHAFASDGKGRPKGKMGDKRNSWNDDF 1965


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