BLASTX nr result

ID: Bupleurum21_contig00023508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023508
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...   437   e-120
ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...   423   e-116
ref|XP_003525658.1| PREDICTED: uncharacterized protein LOC100810...   395   e-107
ref|XP_003549778.1| PREDICTED: uncharacterized protein LOC100778...   395   e-107

>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
            gi|147821405|emb|CAN63500.1| hypothetical protein
            VITISV_011675 [Vitis vinifera]
            gi|297738929|emb|CBI28174.3| unnamed protein product
            [Vitis vinifera]
          Length = 660

 Score =  437 bits (1123), Expect = e-120
 Identities = 237/396 (59%), Positives = 278/396 (70%), Gaps = 7/396 (1%)
 Frame = +1

Query: 52   MDGNMEISVDKLPIKRLDIIEENGAEKFPNDVSYEERRLNLIRRIDFGWAVDREXXXXXX 231
            MDG MEIS+DKLPIKRLD IEENGAE+FP DV Y+++R++LIRRIDF WAV+++      
Sbjct: 1    MDGKMEISLDKLPIKRLDAIEENGAERFPTDVGYDDKRVSLIRRIDFAWAVEKDTKKQKK 60

Query: 232  XXXXXXXXXXXXXXXXXXXPWPWKSLVENLQSAHQELSVIIDLINTVETNDXXXXXXXXX 411
                               PWPW+SLVENL+ AHQELSVIIDLI+TVE ND         
Sbjct: 61   ASKEEAT------------PWPWQSLVENLRLAHQELSVIIDLISTVEANDA-------- 100

Query: 412  XXXXXXXXXXXXXXXXXXXXXXXVTVAGMTRPKQLPNELLSDLAVSAATKLQCYRHLGKY 591
                                   VTVA MTRPK LPNE+LSDL VSAATKLQC+RHL KY
Sbjct: 101  -----------------------VTVASMTRPKPLPNEVLSDLGVSAATKLQCFRHLSKY 137

Query: 592  FKQSAKGLEQQIAREARFYGALIRLQQNWKVKRNRMVAS-PGNEGFYIDLFDNSLYDSTA 768
            FKQSAK LEQQIAREARFYGALIRLQQNWKVKR R+ AS PGNEGF IDLF NSL+D  A
Sbjct: 138  FKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAASAPGNEGFSIDLFSNSLHDPVA 197

Query: 769  TFRPSTISTVRVEHDAAGMLAINIPQNACRSLRFGFLSA------SQENRIKIERSDQEP 930
             FRPS++STVRV+HD+AGMLA+++P N+CR+L FGFL         + ++ K    D+ P
Sbjct: 198  VFRPSSLSTVRVDHDSAGMLAVHLPPNSCRALHFGFLGGHLGNIPKEPSKTKTYGPDELP 257

Query: 931  SGESQKESENDDDCVKNKHAVLREVHRAIFDEQVFDLVNHEAFNPSLGVNVTGIRENYLE 1110
            S E +K   +D++CVK  H+VLRE H+AIFDEQVFDLVN EAFN S GVNVTGIRENYL+
Sbjct: 258  SKEIKKPL-SDNECVKETHSVLREGHQAIFDEQVFDLVNREAFNSSSGVNVTGIRENYLQ 316

Query: 1111 LSINQGASVFISLLPHKQREDMVDNADTQNPESALL 1218
            L+I QGASVF+SL+P  Q E   D    QN ESA+L
Sbjct: 317  LNIGQGASVFMSLVPSGQDEKTADGMGMQNLESAIL 352


>ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|222838847|gb|EEE77198.1|
            predicted protein [Populus trichocarpa]
          Length = 667

 Score =  427 bits (1097), Expect = e-117
 Identities = 222/395 (56%), Positives = 276/395 (69%), Gaps = 6/395 (1%)
 Frame = +1

Query: 52   MDGNMEISVDKLPIKRLDIIEENGAEKFPNDVSYEERRLNLIRRIDFGWAVDREXXXXXX 231
            MDG +E+S+DKLP+KRL+ IEENG E+FP D+ Y+E+++ LIRRIDF WAV++E      
Sbjct: 1    MDGKLEMSLDKLPVKRLESIEENGFERFPTDIGYDEKQVALIRRIDFAWAVEKEDKEKKQ 60

Query: 232  XXXXXXXXXXXXXXXXXXXPWPWKSLVENLQSAHQELSVIIDLINTVETNDXXXXXXXXX 411
                               PWPW+++VENL  AHQELSVIIDLINTVE ND         
Sbjct: 61   KKKQKKSSRESSSTTT---PWPWQNMVENLHLAHQELSVIIDLINTVEANDA-------- 109

Query: 412  XXXXXXXXXXXXXXXXXXXXXXXVTVAGMTRPKQLPNELLSDLAVSAATKLQCYRHLGKY 591
                                   VTVAGMTRPK LPNE+L+DLAVS ATKLQCYR+LGKY
Sbjct: 110  -----------------------VTVAGMTRPKPLPNEILADLAVSTATKLQCYRNLGKY 146

Query: 592  FKQSAKGLEQQIAREARFYGALIRLQQNWKVKRNRMVA-SPGNEGFYIDLFDNSLYDSTA 768
            FKQSAK LEQQ+AREARFYGALIRLQQNWKVKR R+ A +PGNEGF IDLFDNSLYDS A
Sbjct: 147  FKQSAKALEQQVAREARFYGALIRLQQNWKVKRQRVAAIAPGNEGFMIDLFDNSLYDSVA 206

Query: 769  TFRPSTISTVRVEHDAAGMLAINIPQNACRSLRFGFLSA-----SQENRIKIERSDQEPS 933
             F+PS++ST+R++HD+ GMLAIN+P  +C SL FGFLS       + N+IK   S + PS
Sbjct: 207  VFQPSSLSTIRIDHDSDGMLAINLPSKSCHSLVFGFLSGHSNVPKKSNKIKTHGSLKNPS 266

Query: 934  GESQKESENDDDCVKNKHAVLREVHRAIFDEQVFDLVNHEAFNPSLGVNVTGIRENYLEL 1113
               +KES +D++CVK+ H +LR+VHR IFDEQVFD+VN  A N S G+NVTGI+ENYL+L
Sbjct: 267  KNPEKESLSDNECVKDTHLLLRKVHRTIFDEQVFDMVNRGAVNQSSGLNVTGIQENYLQL 326

Query: 1114 SINQGASVFISLLPHKQREDMVDNADTQNPESALL 1218
             I  G S+FIS++P  Q +  +D+   +N ESA++
Sbjct: 327  CIGPGISIFISIVPSDQGDQAIDSEGPENLESAVV 361


>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Cucumis sativus]
            gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like [Cucumis
            sativus]
          Length = 662

 Score =  423 bits (1088), Expect = e-116
 Identities = 226/396 (57%), Positives = 284/396 (71%), Gaps = 7/396 (1%)
 Frame = +1

Query: 52   MDGNMEISVDKLPIKRLDIIEENGAEKFPNDVSYEERRLNLIRRIDFGWAVDREXXXXXX 231
            MD +M++S+DKLP+KRL+ IEENG E+FP+DV YEE+RL+LIRRIDF WA++++      
Sbjct: 1    MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 232  XXXXXXXXXXXXXXXXXXXPWPWKSLVENLQSAHQELSVIIDLINTVETNDXXXXXXXXX 411
                               PW W+S++ENLQ AHQELSVIIDLINTVE ND         
Sbjct: 61   KKSSKESST----------PWQWQSMIENLQLAHQELSVIIDLINTVEANDA-------- 102

Query: 412  XXXXXXXXXXXXXXXXXXXXXXXVTVAGMTRPKQLPNELLSDLAVSAATKLQCYRHLGKY 591
                                   VTVAGMTRPK LPNE+L+DL VS ATKLQC+RHLGKY
Sbjct: 103  -----------------------VTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKY 139

Query: 592  FKQSAKGLEQQIAREARFYGALIRLQQNWKVKRNRMVA-SPGNEGFYIDLFDNSLYDSTA 768
            FKQSAKGLE+Q+AREARFYGALIRLQQNWKVKR R+ A +P NEGF IDLFDNS  D ++
Sbjct: 140  FKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSS 199

Query: 769  TFRPSTISTVRVEHDAAGMLAINIPQNACRSLRFGFLS-ASQENRIKIERSDQ-EPSGES 942
             FRPS+ ST+RV+HD++GMLAIN+P N+C SLRFGFLS  + EN ++ ++++   PS +S
Sbjct: 200  VFRPSS-STIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQS 258

Query: 943  ----QKESENDDDCVKNKHAVLREVHRAIFDEQVFDLVNHEAFNPSLGVNVTGIRENYLE 1110
                +KE  NDD+ +K  +++LR+VH AIF EQVFDLVN EAFNPS+G+NVTGIRENYL+
Sbjct: 259  SVNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNQEAFNPSVGINVTGIRENYLQ 318

Query: 1111 LSINQGASVFISLLPHKQREDMVDNADTQNPESALL 1218
            LSI+QG SVFISL+P  Q    V+ A+++  E+A L
Sbjct: 319  LSIDQGTSVFISLVPSGQSSQTVEGANSEILENASL 354


>ref|XP_003525658.1| PREDICTED: uncharacterized protein LOC100810597 [Glycine max]
          Length = 659

 Score =  395 bits (1015), Expect = e-107
 Identities = 220/392 (56%), Positives = 262/392 (66%), Gaps = 7/392 (1%)
 Frame = +1

Query: 64   MEISVDKLPIKRLDIIEENGAEKFPNDVSYEERRLNLIRRIDFGWAVDREXXXXXXXXXX 243
            ++IS+DKLPIKRLD IEENG E+FP DV Y+E+RL+LIRRIDF WAV+++          
Sbjct: 7    LQISLDKLPIKRLDSIEENGIERFPPDVDYDEKRLSLIRRIDFAWAVEKDEEKKKKQKSS 66

Query: 244  XXXXXXXXXXXXXXXPWPWKSLVENLQSAHQELSVIIDLINTVETNDXXXXXXXXXXXXX 423
                           PW W+ +VENLQ AHQELSVIIDLINTVE ND             
Sbjct: 67   KETST----------PWQWQGMVENLQLAHQELSVIIDLINTVEANDA------------ 104

Query: 424  XXXXXXXXXXXXXXXXXXXVTVAGMTRPKQLPNELLSDLAVSAATKLQCYRHLGKYFKQS 603
                               VTVA MTRPK LPNE LSDLAVSAATKLQCYRH+GKYFKQS
Sbjct: 105  -------------------VTVASMTRPKLLPNEALSDLAVSAATKLQCYRHVGKYFKQS 145

Query: 604  AKGLEQQIAREARFYGALIRLQQNWKVKRNRMVA-SPGNEGFYIDLFDNSLYDSTATFRP 780
            AK  EQQ+AREARFYGALIRLQQNWKVKR R  A  PGNEGF  DLFDNS YD  A  R 
Sbjct: 146  AKAFEQQVAREARFYGALIRLQQNWKVKRQRQAAIVPGNEGFTFDLFDNS-YDQAAIIRS 204

Query: 781  STISTVRVEHDAAGMLAINIPQNACRSLRFGFLSA-SQENRIKIERSDQEPSGE-----S 942
             ++STVRV HDAAG LAIN+  + C SL+FGF+ A S + R K  ++    SGE     +
Sbjct: 205  LSMSTVRVNHDAAGNLAINVSPDLCHSLQFGFVGAQSDDTRRKSNQNKSHFSGELNLGKT 264

Query: 943  QKESENDDDCVKNKHAVLREVHRAIFDEQVFDLVNHEAFNPSLGVNVTGIRENYLELSIN 1122
             +ES +D++CVK  H++LREVH AIF+EQVFDLVN EAFN   GV+VTGIRENYL+LS+ 
Sbjct: 265  GEESLSDEECVKKTHSLLREVHEAIFNEQVFDLVNREAFNTVAGVSVTGIRENYLQLSLG 324

Query: 1123 QGASVFISLLPHKQREDMVDNADTQNPESALL 1218
            Q  SV+++L+ + Q    V+   T N E+A+L
Sbjct: 325  QETSVYLTLVSNSQDHSTVEGELTDNAENAIL 356


>ref|XP_003549778.1| PREDICTED: uncharacterized protein LOC100778422 [Glycine max]
          Length = 660

 Score =  395 bits (1014), Expect = e-107
 Identities = 218/392 (55%), Positives = 260/392 (66%), Gaps = 7/392 (1%)
 Frame = +1

Query: 64   MEISVDKLPIKRLDIIEENGAEKFPNDVSYEERRLNLIRRIDFGWAVDREXXXXXXXXXX 243
            ++IS+DKLPIKRLD IEENG E+FP DV Y+E+RL+LIRRIDF WAV+++          
Sbjct: 7    LQISLDKLPIKRLDSIEENGIERFPLDVDYDEKRLSLIRRIDFAWAVEKDEEKKKKKQKS 66

Query: 244  XXXXXXXXXXXXXXXPWPWKSLVENLQSAHQELSVIIDLINTVETNDXXXXXXXXXXXXX 423
                           PW W+ +VENLQ AHQELSVIIDLINTVE ND             
Sbjct: 67   SKETSA---------PWQWQGMVENLQLAHQELSVIIDLINTVEANDA------------ 105

Query: 424  XXXXXXXXXXXXXXXXXXXVTVAGMTRPKQLPNELLSDLAVSAATKLQCYRHLGKYFKQS 603
                               VTVA MTRPK LPNE LSDLAVSAATKLQCYRH+GKYFKQS
Sbjct: 106  -------------------VTVASMTRPKLLPNEALSDLAVSAATKLQCYRHVGKYFKQS 146

Query: 604  AKGLEQQIAREARFYGALIRLQQNWKVKRNRMVA-SPGNEGFYIDLFDNSLYDSTATFRP 780
            AK  EQQ+AREARFYGALIRLQQNWKVKR R  A  PGNEGF  DL DNS YD  A  R 
Sbjct: 147  AKAFEQQVAREARFYGALIRLQQNWKVKRQRQAAIVPGNEGFTFDLLDNS-YDQAAIIRS 205

Query: 781  STISTVRVEHDAAGMLAINIPQNACRSLRFGFLSASQE------NRIKIERSDQEPSGES 942
             ++STVRV HDAAGMLAIN+  + C SL+FGF+ A  +      N  K   S +   GE 
Sbjct: 206  LSMSTVRVNHDAAGMLAINVSPDLCHSLQFGFVGAQSDDTWRKSNENKSHFSGEHNLGEM 265

Query: 943  QKESENDDDCVKNKHAVLREVHRAIFDEQVFDLVNHEAFNPSLGVNVTGIRENYLELSIN 1122
             +ES +D++CVK  +++LREVH AIF+EQVFDLVN EAFN   GV+VTGIRENYL+LS+ 
Sbjct: 266  GEESLSDEECVKKTNSLLREVHEAIFNEQVFDLVNREAFNTVAGVSVTGIRENYLQLSLG 325

Query: 1123 QGASVFISLLPHKQREDMVDNADTQNPESALL 1218
            QG SV+++L+ + Q    V++    N E+A+L
Sbjct: 326  QGTSVYLTLVSNSQDHSTVEDELNDNVENAIL 357


Top