BLASTX nr result

ID: Bupleurum21_contig00023491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023491
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264786.1| PREDICTED: uncharacterized protein LOC100255...   268   1e-69
ref|XP_002518518.1| conserved hypothetical protein [Ricinus comm...   257   2e-66
ref|XP_002316604.1| predicted protein [Populus trichocarpa] gi|2...   253   3e-65
emb|CBI23183.3| unnamed protein product [Vitis vinifera]              246   5e-63
ref|XP_002304927.1| predicted protein [Populus trichocarpa] gi|2...   239   5e-61

>ref|XP_002264786.1| PREDICTED: uncharacterized protein LOC100255600 [Vitis vinifera]
          Length = 1000

 Score =  268 bits (685), Expect = 1e-69
 Identities = 140/255 (54%), Positives = 168/255 (65%)
 Frame = -1

Query: 767  IRMNPPNQEQRAVLHQPFPMRHEVQQNFVLPAAMSTPTHLGPPHLNRGYVPRGYGSFVSN 588
            I +N  NQ Q   L QP  +  E   NFV        ++   P LN GY P+G+ +  S 
Sbjct: 670  IPLNGKNQTQVTRL-QPQFLPQETHGNFVPSTTAPVSSYSVAPPLNPGYTPQGHAAATST 728

Query: 587  ALLNPTSNMHHAPQVVHNPNMTMHXXXXXXXXXXXXXXXXPSQMIPLPQNSNFISPNPPA 408
             LLNP   +H +  + +  N ++H                 SQMI +PQN+  I  N   
Sbjct: 729  ILLNPVPGVHSSIPIHNISNSSVHFQGGALPPLPPGPPPATSQMINIPQNTGPIVSNQQP 788

Query: 407  GGAFSGLFNSLMAQGLISLTNPASVQDPVGLEFSSDHQKVRYESAITSLYGDLPRQCTTC 228
            G A SGL +SLMAQGLISL    +VQD VG+EF+ D  KVR+ESAI++LYGD+ RQCTTC
Sbjct: 789  GSALSGLISSLMAQGLISLAKQPTVQDSVGIEFNVDLLKVRHESAISALYGDMSRQCTTC 848

Query: 227  GIRFKCQEEHSSHMDWHVTKNRMSKNHKQKPSRKWFVSVDMWLSGAEALGAESVPGFLPT 48
            G+RFKCQEEHSSHMDWHVTKNR+SKN KQKPSRKWFVS  MWLS AEALG ++VPGFLPT
Sbjct: 849  GLRFKCQEEHSSHMDWHVTKNRISKNRKQKPSRKWFVSASMWLSSAEALGTDAVPGFLPT 908

Query: 47   ENLAEKKDDEELAVP 3
            E +AEKKDDEELAVP
Sbjct: 909  ETIAEKKDDEELAVP 923


>ref|XP_002518518.1| conserved hypothetical protein [Ricinus communis]
            gi|223542363|gb|EEF43905.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1023

 Score =  257 bits (656), Expect = 2e-66
 Identities = 144/253 (56%), Positives = 169/253 (66%)
 Frame = -1

Query: 761  MNPPNQEQRAVLHQPFPMRHEVQQNFVLPAAMSTPTHLGPPHLNRGYVPRGYGSFVSNAL 582
            MN  NQ Q      PF  + E   NF  P+  S P H   P  +  YV + +GS +S   
Sbjct: 694  MNQQNQGQV----NPFQPQRE---NFP-PSVASLPPHPLAPTFDHRYVTQAHGSAMSRIH 745

Query: 581  LNPTSNMHHAPQVVHNPNMTMHXXXXXXXXXXXXXXXXPSQMIPLPQNSNFISPNPPAGG 402
             N  S+M   P  V+N   TMH                 S MIP+PQN+  ++ N PAGG
Sbjct: 746  SNLVSSMP-LPLPVNNIPNTMHLQVGVRPPLPPGPPPA-SHMIPIPQNAGPVASNQPAGG 803

Query: 401  AFSGLFNSLMAQGLISLTNPASVQDPVGLEFSSDHQKVRYESAITSLYGDLPRQCTTCGI 222
            AFSGL NSL+AQGLISL     VQD VGLEF++D  KVR+ESAI++LY DLPRQCTTCG+
Sbjct: 804  AFSGLINSLVAQGLISLKQ-TPVQDSVGLEFNADLLKVRHESAISALYADLPRQCTTCGL 862

Query: 221  RFKCQEEHSSHMDWHVTKNRMSKNHKQKPSRKWFVSVDMWLSGAEALGAESVPGFLPTEN 42
            RFKCQE+HSSHMDWHVT+NRMSKN KQKPSRKWFVS  MWL GAEALG ++VPGFLPTE 
Sbjct: 863  RFKCQEDHSSHMDWHVTRNRMSKNRKQKPSRKWFVSATMWLRGAEALGTDAVPGFLPTEA 922

Query: 41   LAEKKDDEELAVP 3
            + EKKDDEE+AVP
Sbjct: 923  VVEKKDDEEMAVP 935


>ref|XP_002316604.1| predicted protein [Populus trichocarpa] gi|222859669|gb|EEE97216.1|
            predicted protein [Populus trichocarpa]
          Length = 1031

 Score =  253 bits (646), Expect = 3e-65
 Identities = 139/254 (54%), Positives = 166/254 (65%), Gaps = 1/254 (0%)
 Frame = -1

Query: 761  MNPPNQEQRAVLHQPFPMRHEVQQNFVLPA-AMSTPTHLGPPHLNRGYVPRGYGSFVSNA 585
            +N  NQ         F   HE ++NF     A+  P  L  P +N GY   G+GS  SNA
Sbjct: 688  LNQQNQAHFNPFQPKFLPSHEARENFHPSGIALLPPRPLARP-MNHGYTTHGHGS--SNA 744

Query: 584  LLNPTSNMHHAPQVVHNPNMTMHXXXXXXXXXXXXXXXXPSQMIPLPQNSNFISPNPPAG 405
            L  P+  +   P  V N   T+H                  Q +P PQN++  +P  P+G
Sbjct: 745  L--PSVQL---PLAVSNVPNTLHSQVGVRPPLPQGPP----QTMPFPQNASSGAPAQPSG 795

Query: 404  GAFSGLFNSLMAQGLISLTNPASVQDPVGLEFSSDHQKVRYESAITSLYGDLPRQCTTCG 225
             AFSGL NSLMAQGLI++T    VQD VGLEF++D  K+RYESAI++LY DLPRQCTTCG
Sbjct: 796  IAFSGLINSLMAQGLITMTKQTPVQDSVGLEFNADLLKLRYESAISALYSDLPRQCTTCG 855

Query: 224  IRFKCQEEHSSHMDWHVTKNRMSKNHKQKPSRKWFVSVDMWLSGAEALGAESVPGFLPTE 45
            +R KCQEEHSSHMDWHVTKNRMSKN KQ PSRKWFVS  MWLSGAEALG ++VPGFLPTE
Sbjct: 856  LRLKCQEEHSSHMDWHVTKNRMSKNRKQNPSRKWFVSASMWLSGAEALGTDAVPGFLPTE 915

Query: 44   NLAEKKDDEELAVP 3
             + EKKDD+E+AVP
Sbjct: 916  TIVEKKDDDEMAVP 929


>emb|CBI23183.3| unnamed protein product [Vitis vinifera]
          Length = 1003

 Score =  246 bits (627), Expect = 5e-63
 Identities = 135/255 (52%), Positives = 159/255 (62%)
 Frame = -1

Query: 767  IRMNPPNQEQRAVLHQPFPMRHEVQQNFVLPAAMSTPTHLGPPHLNRGYVPRGYGSFVSN 588
            I +N  NQ Q   L QP  +  E   NFV        ++   P LN GY P+G+ +  S 
Sbjct: 689  IPLNGKNQTQVTRL-QPQFLPQETHGNFVPSTTAPVSSYSVAPPLNPGYTPQGHAAATST 747

Query: 587  ALLNPTSNMHHAPQVVHNPNMTMHXXXXXXXXXXXXXXXXPSQMIPLPQNSNFISPNPPA 408
             LLNP   +H +  + HN                          I    N+  I  N   
Sbjct: 748  ILLNPVPGVHSSIPI-HN--------------------------ISNSSNTGPIVSNQQP 780

Query: 407  GGAFSGLFNSLMAQGLISLTNPASVQDPVGLEFSSDHQKVRYESAITSLYGDLPRQCTTC 228
            G A SGL +SLMAQGLISL    +VQD VG+EF+ D  KVR+ESAI++LYGD+ RQCTTC
Sbjct: 781  GSALSGLISSLMAQGLISLAKQPTVQDSVGIEFNVDLLKVRHESAISALYGDMSRQCTTC 840

Query: 227  GIRFKCQEEHSSHMDWHVTKNRMSKNHKQKPSRKWFVSVDMWLSGAEALGAESVPGFLPT 48
            G+RFKCQEEHSSHMDWHVTKNR+SKN KQKPSRKWFVS  MWLS AEALG ++VPGFLPT
Sbjct: 841  GLRFKCQEEHSSHMDWHVTKNRISKNRKQKPSRKWFVSASMWLSSAEALGTDAVPGFLPT 900

Query: 47   ENLAEKKDDEELAVP 3
            E +AEKKDDEELAVP
Sbjct: 901  ETIAEKKDDEELAVP 915


>ref|XP_002304927.1| predicted protein [Populus trichocarpa] gi|222847891|gb|EEE85438.1|
            predicted protein [Populus trichocarpa]
          Length = 841

 Score =  239 bits (610), Expect = 5e-61
 Identities = 134/255 (52%), Positives = 158/255 (61%), Gaps = 6/255 (2%)
 Frame = -1

Query: 749  NQEQRAVLHQPFPMR---HEVQQNFVLPAAMSTPTHLGPPHLNRGYVPRGYGSFVSNALL 579
            NQ+ +A ++   P +   HE ++NF      S P     P LN GY   G+ + +S    
Sbjct: 544  NQQNQAHVNPFQPQQLPSHEARENFHPSGVTSMPPRPLAPPLNHGYNTHGHSTAISMV-- 601

Query: 578  NPTSNMHHAPQVVHNPNMTMHXXXXXXXXXXXXXXXXPSQMIPLPQNS--NFIS-PNPPA 408
               SN   A Q                              +PLP N+  N    P  P+
Sbjct: 602  --PSNALPAVQ------------------------------LPLPVNNIPNISGVPGQPS 629

Query: 407  GGAFSGLFNSLMAQGLISLTNPASVQDPVGLEFSSDHQKVRYESAITSLYGDLPRQCTTC 228
            G AFSGLFNSLMAQGLISLT    VQD VGLEF++D  K+RYESAI++LYGDLPRQCTTC
Sbjct: 630  GSAFSGLFNSLMAQGLISLTKQTPVQDSVGLEFNADLLKLRYESAISALYGDLPRQCTTC 689

Query: 227  GIRFKCQEEHSSHMDWHVTKNRMSKNHKQKPSRKWFVSVDMWLSGAEALGAESVPGFLPT 48
            G+RFKCQEEHS+HMDWHVTKNRMSKN KQK SR WFVS  MWLSGAEALG ++ PGFLPT
Sbjct: 690  GLRFKCQEEHSTHMDWHVTKNRMSKNRKQKSSRNWFVSASMWLSGAEALGTDAAPGFLPT 749

Query: 47   ENLAEKKDDEELAVP 3
            E   EKKDD+E+AVP
Sbjct: 750  ETAVEKKDDDEMAVP 764


Top