BLASTX nr result

ID: Bupleurum21_contig00023478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023478
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/124 (37%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   PFKVVEEIVNRIWKNGGLVKVSQKDPRVFIFKFDSMRSMNSALSKGTWFFAKRPVVVCAW 182
           P+ VV  I  RIW + GL +V   D   FIF FDS+    + L    W  A RP+V+  W
Sbjct: 20  PYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLESAPWHMANRPLVLKRW 79

Query: 183 GGSVM---ATVTKIPIWVKLSAVPECY*TREGISFLASYIGKPVCMDSLTADFDILPFVK 353
             ++      + ++P+WV+L  VP  Y T +G+S +AS IG P+  D  T     L +V+
Sbjct: 80  QPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYVR 139

Query: 354 VCVE 365
           VCVE
Sbjct: 140 VCVE 143


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   PFKVVEEIVNRIWKNGGLVKVSQKDPRVFIFKFDSMRSMNSALSKGTWFFAKRPVVVCAW 182
           P+ VV  I  RIW + GL +V   D   FIF FDS+    + L +  W  A RP+V+  W
Sbjct: 167 PYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226

Query: 183 GGSVM---ATVTKIPIWVKLSAVPECY*TREGISFLASYIGKPVCMDSLTADFDILPFVK 353
             ++      + ++P+WV+L  VP  Y T +G+S +AS +G P+  D  T     L + +
Sbjct: 227 QPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYAR 286

Query: 354 VCVE 365
           VCVE
Sbjct: 287 VCVE 290


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   PFKVVEEIVNRIWKNGGLVKVSQKDPRVFIFKFDSMRSMNSALSKGTWFFAKRPVVVCAW 182
           P+ VV  I  RIW + GL +V   D   FIF FDS+    + L +  W  A RP+V+  W
Sbjct: 167 PYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226

Query: 183 GGSVM---ATVTKIPIWVKLSAVPECY*TREGISFLASYIGKPVCMDSLTADFDILPFVK 353
             ++        ++P+WV+L  VP  Y T +G+S +AS IG P+  D  T     L + +
Sbjct: 227 QPNMQFLKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYAR 286

Query: 354 VCVE 365
           VCVE
Sbjct: 287 VCVE 290


>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   PFKVVEEIVNRIWKNGGLVKVSQKDPRVFIFKFDSMRSMNSALSKGTWFFAKRPVVVCAW 182
           P+ VV  I  RIW + GL +V   D   FIF FD +    + L +  W  A RP+V+  W
Sbjct: 141 PYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDFVDHATNVLERAPWHMANRPLVLKRW 200

Query: 183 GGSVM---ATVTKIPIWVKLSAVPECY*TREGISFLASYIGKPVCMDSLTADFDILPFVK 353
             ++      + ++P+WV+L  VP  Y T +G+S +AS IG P+  D  T     L + +
Sbjct: 201 QPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYAR 260

Query: 354 VCVE 365
           VCVE
Sbjct: 261 VCVE 264


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   PFKVVEEIVNRIWKNGGLVKVSQKDPRVFIFKFDSMRSMNSALSKGTWFFAKRPVVVCAW 182
           P+ VV  I  RIW + GL +V   D   FIF FD +    + L +  W  A RP+V+  W
Sbjct: 167 PYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRW 226

Query: 183 GGSVM---ATVTKIPIWVKLSAVPECY*TREGISFLASYIGKPVCMDSLTADFDILPFVK 353
             ++      + ++P+WV+L  VP  Y T +G+S +AS +G P+  D  T     L + +
Sbjct: 227 QPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYAR 286

Query: 354 VCVE 365
           VCVE
Sbjct: 287 VCVE 290



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3    PFKVVEEIVNRIWKNGGLVKVSQKDPRVFIFKFDSMRSMNSALSKGTWFFAKRPVVVCAW 182
            P+ VV  I  RIW + GL +V   D   FIF FD +    + L +  W  A RP+V+  W
Sbjct: 960  PYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRW 1019

Query: 183  GGSVM---ATVTKIPIWVKLSAVPECY*TREGISFLASYIGKPVCMDSLTADFDILPFVK 353
              ++      + ++P+WV+L  VP  Y T +G+S +AS +G P+  D  T     L + +
Sbjct: 1020 QPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYAR 1079

Query: 354  VCVE 365
            VCVE
Sbjct: 1080 VCVE 1083


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