BLASTX nr result

ID: Bupleurum21_contig00023474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023474
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329415.1| hypothetical protein POPTRDRAFT_836962 [Popu...   281   6e-74
ref|XP_002517939.1| Beta-expansin 3 precursor, putative [Ricinus...   281   1e-73
ref|XP_002319359.1| hypothetical protein POPTRDRAFT_243090 [Popu...   276   2e-72
ref|XP_004139938.1| PREDICTED: expansin-B3-like [Cucumis sativus]     271   1e-70
ref|XP_004136819.1| PREDICTED: expansin-B3-like [Cucumis sativus]     269   3e-70

>ref|XP_002329415.1| hypothetical protein POPTRDRAFT_836962 [Populus trichocarpa]
           gi|222870465|gb|EEF07596.1| hypothetical protein
           POPTRDRAFT_836962 [Populus trichocarpa]
          Length = 267

 Score =  281 bits (720), Expect = 6e-74
 Identities = 134/195 (68%), Positives = 154/195 (78%)
 Frame = -2

Query: 586 LLILLCVFAPLLSAKPLHRGVSGPHWLPATATWYXXXXXXXXXXXXXXXXSMVDVKPYKA 407
           L+ LL +    L   P H  V+  HW PATATWY                S+VDVKP++A
Sbjct: 15  LVRLLFLLGWSLQVHPQHN-VADLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPFRA 73

Query: 406 RVGAVSPVLFKSGEGCGACYKVRCLDRSICSRRAVTVIITDECPGGYCSAGRTHFDLSGA 227
           RVGAVSPVLFK+GEGCGACYKVRCLD+SICSRRAVT+I+TDECPGGYCS G THFDLSGA
Sbjct: 74  RVGAVSPVLFKNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGNTHFDLSGA 133

Query: 226 AFGRLAVSGEHNQIRNRGVIPVSYRRTACKYPGKNIAFKVNEGSTPHWLSLLVEFEDGDG 47
           AFGR+A+SGE+ Q+RNRG IPV YRRT CKYPGKNIAF VNEGST +WLS+LVEFEDGDG
Sbjct: 134 AFGRMAISGENGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSILVEFEDGDG 193

Query: 46  DLGSMHIKQAGSNQW 2
           D+GSMHI++AG  +W
Sbjct: 194 DVGSMHIREAGGTEW 208


>ref|XP_002517939.1| Beta-expansin 3 precursor, putative [Ricinus communis]
           gi|223542921|gb|EEF44457.1| Beta-expansin 3 precursor,
           putative [Ricinus communis]
          Length = 259

 Score =  281 bits (718), Expect = 1e-73
 Identities = 128/179 (71%), Positives = 149/179 (83%)
 Frame = -2

Query: 538 LHRGVSGPHWLPATATWYXXXXXXXXXXXXXXXXSMVDVKPYKARVGAVSPVLFKSGEGC 359
           +H  V+  HW PATATWY                S+VDVKP KARVGAVSP+LFK+GEGC
Sbjct: 21  VHHRVTDLHWKPATATWYGSPDGDGSDGGACGYGSLVDVKPLKARVGAVSPILFKNGEGC 80

Query: 358 GACYKVRCLDRSICSRRAVTVIITDECPGGYCSAGRTHFDLSGAAFGRLAVSGEHNQIRN 179
           GACYKV+CLD+SICSRRAVT+I+TDECPGGYCS GRTHFDLSGAAFGR+A++GE  Q+RN
Sbjct: 81  GACYKVKCLDKSICSRRAVTIIVTDECPGGYCSNGRTHFDLSGAAFGRMAITGESGQLRN 140

Query: 178 RGVIPVSYRRTACKYPGKNIAFKVNEGSTPHWLSLLVEFEDGDGDLGSMHIKQAGSNQW 2
           RG +PV+YRRT CKYPGKNIAF VNEGST +WLSLLVEFEDGDGD+GSMHI++AG ++W
Sbjct: 141 RGELPVTYRRTPCKYPGKNIAFHVNEGSTNYWLSLLVEFEDGDGDVGSMHIREAGGSEW 199


>ref|XP_002319359.1| hypothetical protein POPTRDRAFT_243090 [Populus trichocarpa]
           gi|222857735|gb|EEE95282.1| hypothetical protein
           POPTRDRAFT_243090 [Populus trichocarpa]
          Length = 237

 Score =  276 bits (707), Expect = 2e-72
 Identities = 127/178 (71%), Positives = 144/178 (80%)
 Frame = -2

Query: 535 HRGVSGPHWLPATATWYXXXXXXXXXXXXXXXXSMVDVKPYKARVGAVSPVLFKSGEGCG 356
           H  V+  HW PATATWY                S+VDVKP +ARVGAVSP+LFK+GEGCG
Sbjct: 3   HHDVADLHWKPATATWYGSPDGDGSNGGACGYGSLVDVKPLRARVGAVSPILFKNGEGCG 62

Query: 355 ACYKVRCLDRSICSRRAVTVIITDECPGGYCSAGRTHFDLSGAAFGRLAVSGEHNQIRNR 176
           ACYKVRCLD+SICS RAVT+I+TDECPGGYCS G THFDLSGAAFG +A+SGE+ Q+RNR
Sbjct: 63  ACYKVRCLDKSICSERAVTIIVTDECPGGYCSNGNTHFDLSGAAFGHMAISGENGQLRNR 122

Query: 175 GVIPVSYRRTACKYPGKNIAFKVNEGSTPHWLSLLVEFEDGDGDLGSMHIKQAGSNQW 2
           G IPV YRRT CKYPGKNIAF VNEGST +WLSLLVEFEDGDGD+GSMHI++AG  +W
Sbjct: 123 GEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDVGSMHIREAGGTEW 180


>ref|XP_004139938.1| PREDICTED: expansin-B3-like [Cucumis sativus]
          Length = 269

 Score =  271 bits (692), Expect = 1e-70
 Identities = 126/183 (68%), Positives = 144/183 (78%)
 Frame = -2

Query: 550 SAKPLHRGVSGPHWLPATATWYXXXXXXXXXXXXXXXXSMVDVKPYKARVGAVSPVLFKS 371
           +A  L   V   HWLPATATWY                ++VDVKP KARVGAVSPVLF++
Sbjct: 28  AAAHLQHPVPDLHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFRN 87

Query: 370 GEGCGACYKVRCLDRSICSRRAVTVIITDECPGGYCSAGRTHFDLSGAAFGRLAVSGEHN 191
           GEGCGACYKV+CLD +ICSRRAVT+I+TDECPGGYCS G THFDLSGAAFGR+A++GE  
Sbjct: 88  GEGCGACYKVKCLDHNICSRRAVTIIVTDECPGGYCSNGNTHFDLSGAAFGRMAIAGEGG 147

Query: 190 QIRNRGVIPVSYRRTACKYPGKNIAFKVNEGSTPHWLSLLVEFEDGDGDLGSMHIKQAGS 11
           Q+RNRG IPV YRRT CKYPGKNIAF VNEGST +WLSLLVEFEDGDGD+G+M IK+  S
Sbjct: 148 QLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLVEFEDGDGDIGAMQIKETNS 207

Query: 10  NQW 2
            +W
Sbjct: 208 GEW 210


>ref|XP_004136819.1| PREDICTED: expansin-B3-like [Cucumis sativus]
          Length = 269

 Score =  269 bits (688), Expect = 3e-70
 Identities = 124/178 (69%), Positives = 145/178 (81%)
 Frame = -2

Query: 535 HRGVSGPHWLPATATWYXXXXXXXXXXXXXXXXSMVDVKPYKARVGAVSPVLFKSGEGCG 356
           +R  +  HWLPATATWY                S+VDVKP+KARVGAVSP+LFK GEGCG
Sbjct: 34  NRTTAASHWLPATATWYGSPEGDGSDGGACGYGSLVDVKPFKARVGAVSPILFKDGEGCG 93

Query: 355 ACYKVRCLDRSICSRRAVTVIITDECPGGYCSAGRTHFDLSGAAFGRLAVSGEHNQIRNR 176
           ACYKVRCLDR+IC+RRAVT+I+TDECPGGYC+ GRTHFDLSGAAFGR+AV+G  +++R+R
Sbjct: 94  ACYKVRCLDRAICARRAVTIIVTDECPGGYCANGRTHFDLSGAAFGRMAVAGAGSRLRDR 153

Query: 175 GVIPVSYRRTACKYPGKNIAFKVNEGSTPHWLSLLVEFEDGDGDLGSMHIKQAGSNQW 2
           G + V+YRRT C+Y GKNIAF VNEGST HWLSLLVEFEDGDGDLGSM I+QA S +W
Sbjct: 154 GELTVAYRRTPCRYRGKNIAFHVNEGSTDHWLSLLVEFEDGDGDLGSMQIRQANSKEW 211


Top