BLASTX nr result

ID: Bupleurum21_contig00023443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023443
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301416.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-25
gb|ABK96564.1| unknown [Populus trichocarpa x Populus deltoides]      117   2e-24
ref|XP_003548339.1| PREDICTED: uncharacterized protein At4g00950...   116   6e-24
ref|XP_002523324.1| conserved hypothetical protein [Ricinus comm...   108   1e-21
ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950...   107   3e-21

>ref|XP_002301416.1| predicted protein [Populus trichocarpa] gi|222843142|gb|EEE80689.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  120 bits (301), Expect = 3e-25
 Identities = 85/218 (38%), Positives = 117/218 (53%), Gaps = 10/218 (4%)
 Frame = -1

Query: 766 PPLQTSTACSVPFLWEEQPGKPLPCTAITTH-----KKSLELPPRLQQPTEYSRLITKTP 602
           PPLQTS   SVPF WEE+PGKP   TA+        +KSLELPPRL   T     +TK P
Sbjct: 37  PPLQTSA--SVPFRWEEEPGKPWESTALVPRAINFPQKSLELPPRLLIDTN----MTKLP 90

Query: 601 SPTTVLDGPYLPKNVIXXXXXXXXXXXXXXXXRHVDFFDSGRFTSPVSGALLLAGENKGK 422
           SPTTVL+GPY+ K+                  R  + + S R  SP  G L     +K +
Sbjct: 91  SPTTVLEGPYMGKS-------SRFQSSSFRIIRSRECYGSFRSCSPEKGQLGTVVPSKRR 143

Query: 421 KGIFGSFRGQMQKSSK-LKGTKQEFNGEGSFVFSPSLEF----HVGQDEEIDNNKSTSTK 257
               G F G      + LKG ++  +G GS+VF  S++     H   +EE   + S + K
Sbjct: 144 VKEKGRFLGSWSWVRRGLKGKRE--SGGGSYVFPSSVDREPADHCVNEEEEMISSSDNVK 201

Query: 256 IKRNGSFSSVSHAKSHFWTAMCEGIKHAIPWKSRKSKK 143
           + R+GS S+VS+A+S FW  + EG+K  +PW+S++ KK
Sbjct: 202 MTRSGSLSAVSNARSQFWANVYEGLKQVVPWRSKELKK 239


>gb|ABK96564.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 245

 Score =  117 bits (294), Expect = 2e-24
 Identities = 84/218 (38%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
 Frame = -1

Query: 766 PPLQTSTACSVPFLWEEQPGKPLPCTAITTH-----KKSLELPPRLQQPTEYSRLITKTP 602
           PPLQTS   SVPF WEE+PGKP   TA+        +KSLELPPRL   T     +TK P
Sbjct: 37  PPLQTSA--SVPFRWEEEPGKPWESTALVPRAINFPQKSLELPPRLLIDTN----MTKLP 90

Query: 601 SPTTVLDGPYLPKNVIXXXXXXXXXXXXXXXXRHVDFFDSGRFTSPVSGALLLAGENKGK 422
           SPT VL+GPY+ K+                  R  + + S R  SP  G L     +K +
Sbjct: 91  SPTRVLEGPYMGKS-------SRFQSSSFRTIRSRECYGSFRSYSPEKGQLGTVVPSKRR 143

Query: 421 KGIFGSFRGQMQKSSK-LKGTKQEFNGEGSFVFSPSLEF----HVGQDEEIDNNKSTSTK 257
               G F G      + LKG ++  +G GS+VF  S++     H   +EE   + S + K
Sbjct: 144 VKEKGRFLGSWSWVRRGLKGKRE--SGGGSYVFPSSVDREPADHCVNEEEEMISSSDNVK 201

Query: 256 IKRNGSFSSVSHAKSHFWTAMCEGIKHAIPWKSRKSKK 143
           + R+GS S+VS+A+S FW  + EG+K  +PW+S++ KK
Sbjct: 202 MTRSGSLSAVSNARSQFWANVYEGLKQVVPWRSKELKK 239


>ref|XP_003548339.1| PREDICTED: uncharacterized protein At4g00950-like [Glycine max]
          Length = 241

 Score =  116 bits (290), Expect = 6e-24
 Identities = 82/220 (37%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
 Frame = -1

Query: 766 PPLQTSTACSVPFLWEEQPGKPLPCTAITTHK----KSLELPPRLQQPTEYSRLITKTPS 599
           PPL TS   SVPF WEE+PGKP PCT I +      K LELPPRL   ++ +    K  S
Sbjct: 37  PPLFTSA--SVPFGWEEEPGKPRPCTDIVSFSNPTPKCLELPPRLLLDSQNNNKSNKLSS 94

Query: 598 PTTVLDGPYLPKNVIXXXXXXXXXXXXXXXXRHVDFFDS-----GRFTSPVSGALLLAGE 434
           PTTVL+GPY                       + D + S     G+  + V    +   E
Sbjct: 95  PTTVLEGPY-------PYVATTNTCNSPSFRMNEDLYGSFGSERGKLGTMVLNQGVGIKE 147

Query: 433 NKGKKGIFGSFRGQMQKSSKLKGTKQEFNGEGSFVFSPSLEFHVGQDEE-IDNNKSTSTK 257
            + +KG FGS+R +  K       ++   G GS+VF  S+E    +D E +  +K   + 
Sbjct: 148 EEKEKGWFGSWREKALK-------REASGGGGSYVFPSSVE----KDPECVGTHKKVRSM 196

Query: 256 IKRN--GSFSSVSHAKSHFWTAMCEGIKHAIPWKSRKSKK 143
            KRN  GSF++  HAKS  WT MCEG+K  +PW+ +K KK
Sbjct: 197 RKRNRPGSFTNPFHAKSSVWTTMCEGLKRVVPWRGKKLKK 236


>ref|XP_002523324.1| conserved hypothetical protein [Ricinus communis]
           gi|223537412|gb|EEF39040.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score =  108 bits (270), Expect = 1e-21
 Identities = 85/218 (38%), Positives = 115/218 (52%), Gaps = 10/218 (4%)
 Frame = -1

Query: 766 PPLQTSTACSVPFLWEEQPGKPLPCT-AITT----HKKSLELPPRLQQPTEYSRLITKTP 602
           PPL +S A  VPF WEE+PGKP  C+ AITT      K LELPPRL      S+L    P
Sbjct: 35  PPLYSSAA--VPFRWEEEPGKPRECSGAITTPTDLSPKCLELPPRLLLEANVSKL----P 88

Query: 601 SPTTVLDGPYLPKNVIXXXXXXXXXXXXXXXXRHVDFFDSGRFTSPVSGALLLAGENKGK 422
           SPTTVLDGPY  ++                        +  +FT     AL+L+      
Sbjct: 89  SPTTVLDGPYTGRSSRFQSSSFRMIRRECYGSFRTCSPERDQFT-----ALVLSKRGIKD 143

Query: 421 KGIFGSFRGQMQKSSKLKGTKQEFNGEGSFVF-SPSLEFHVG----QDEEIDNNKSTSTK 257
           +G  GS+R   +     KG K+E  G  S+VF S S++  V     +++EI +   T T+
Sbjct: 144 RGFLGSWRWGRRG---FKG-KREVAG-ASYVFPSSSMDREVEDGNEEEKEISSKNVTITR 198

Query: 256 IKRNGSFSSVSHAKSHFWTAMCEGIKHAIPWKSRKSKK 143
           I+R+GSFS+ S  +SHFW  + EG+K  +PW+S K KK
Sbjct: 199 IRRSGSFSTSS--RSHFWATIYEGLKQVVPWRSGKLKK 234


>ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950 [Vitis vinifera]
           gi|147794098|emb|CAN71155.1| hypothetical protein
           VITISV_030317 [Vitis vinifera]
           gi|297745486|emb|CBI40566.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  107 bits (267), Expect = 3e-21
 Identities = 76/214 (35%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
 Frame = -1

Query: 766 PPLQTSTACSVPFLWEEQPGKPLPCTAITTHKKS-----LELPPRLQQPTEYSRLITKTP 602
           PPLQT+   SVPF WEE+PGKP PCTA+    KS     L+ PPRL         ++K P
Sbjct: 33  PPLQTTA--SVPFRWEEEPGKPRPCTALVALSKSSSARCLDPPPRLFSSDVK---LSKMP 87

Query: 601 SPTTVLDGPYLPKNVIXXXXXXXXXXXXXXXXRHVDFFDSGRFTSPVSGALLLAGENKGK 422
           SPTTVL+GPY+ ++                          GR  SP  G L       G+
Sbjct: 88  SPTTVLEGPYVARSAFQCSSFRVARDRRHSF---------GRGGSPERGQL--GAMVLGR 136

Query: 421 KGIFGSFRGQMQKSSKLKGTKQEFNGEGSFVFSPSLEFHVGQDEEIDNNKSTSTKIKRNG 242
           +G FG + G+     K + ++     EGS   SP+     G  +    +    T++ R+G
Sbjct: 137 RGFFGGW-GRKNHKGKREASRSLDLEEGS---SPAT---TGDYDSGGGSSEKMTRMSRSG 189

Query: 241 SFSSVSHAKSHFWTAMCEGIKHAIPWK-SRKSKK 143
            + S+S A+SHFW ++ EG+K  +PWK S+K KK
Sbjct: 190 RYLSLSQARSHFWASVYEGLKQVVPWKRSKKLKK 223


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