BLASTX nr result

ID: Bupleurum21_contig00023442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023442
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323898.1| predicted protein [Populus trichocarpa] gi|2...   153   5e-35
ref|XP_003633772.1| PREDICTED: protein RIK-like [Vitis vinifera]      152   6e-35
emb|CBI21205.3| unnamed protein product [Vitis vinifera]              152   6e-35
ref|NP_566850.3| protein RIK [Arabidopsis thaliana] gi|156633616...   132   6e-29
dbj|BAB02585.1| unnamed protein product [Arabidopsis thaliana]        132   6e-29

>ref|XP_002323898.1| predicted protein [Populus trichocarpa] gi|222866900|gb|EEF04031.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score =  153 bits (386), Expect = 5e-35
 Identities = 91/188 (48%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
 Frame = -3

Query: 678 DQYVNHIMNETGATVLLRGRXXXXXXXXXXXXXXXPLHLLLSGSNPKALEHAKLLAENLL 499
           DQY++HIMNETG TV+LRGR               PLHL LS SNPK LE AK L+ENLL
Sbjct: 251 DQYISHIMNETGVTVVLRGRGSGNCESQSTGESQQPLHLFLSASNPKGLEDAKRLSENLL 310

Query: 498 DTICSECGASRVSSCKVYGAV-------XXXXXXXXXXXATISTASFMXXXXXXXXXXXX 340
           DTI  ECGASR SSCKVY AV                   T +    M            
Sbjct: 311 DTISLECGASRASSCKVYNAVPPPQTLTGAHAAGIEHKLNTSAVTGLMLPTMSSTPPIPA 370

Query: 339 XXTFLS--------GTTPQPASFMSCGQLQPNMGSYSQPSVSSGTSYNGYGGIYPQATPL 184
               +S        GT  Q  + +SCGQ QP++  YSQP V  GTSY+GYGGIYPQATPL
Sbjct: 371 SLVSVSGVATVCSQGTVSQSGAMLSCGQPQPSVAGYSQPFVMGGTSYSGYGGIYPQATPL 430

Query: 183 QQVALALR 160
           QQVA  LR
Sbjct: 431 QQVAQVLR 438


>ref|XP_003633772.1| PREDICTED: protein RIK-like [Vitis vinifera]
          Length = 566

 Score =  152 bits (385), Expect = 6e-35
 Identities = 95/189 (50%), Positives = 104/189 (55%), Gaps = 16/189 (8%)
 Frame = -3

Query: 678 DQYVNHIMNETGATVLLRGRXXXXXXXXXXXXXXXPLHLLLSGSNPKALEHAKLLAENLL 499
           DQY+NHIMNETGATV LRGR                LHL LS +N K LE AKLLAENLL
Sbjct: 317 DQYINHIMNETGATVSLRGRGSGNSESPNGEGQQP-LHLFLSSNNLKGLEDAKLLAENLL 375

Query: 498 DTICSECGASRVSSCKVYGA--------VXXXXXXXXXXXATISTA--------SFMXXX 367
           DTIC+ECGASR SSCKVYGA        V            T STA        S     
Sbjct: 376 DTICAECGASRASSCKVYGAVPPPQQLLVGVQSSGNELNVKTSSTACLASSAVSSTPTPL 435

Query: 366 XXXXXXXXXXXTFLSGTTPQPASFMSCGQLQPNMGSYSQPSVSSGTSYNGYGGIYPQATP 187
                       F  G   Q   F + GQ Q N+  Y  PS+++GTSY+GYGGIYPQATP
Sbjct: 436 VSPLTVPGVSTGFSQGAVSQCGGFFNSGQPQSNLVCYPPPSLTAGTSYSGYGGIYPQATP 495

Query: 186 LQQVALALR 160
           LQQVALALR
Sbjct: 496 LQQVALALR 504


>emb|CBI21205.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score =  152 bits (385), Expect = 6e-35
 Identities = 95/189 (50%), Positives = 104/189 (55%), Gaps = 16/189 (8%)
 Frame = -3

Query: 678 DQYVNHIMNETGATVLLRGRXXXXXXXXXXXXXXXPLHLLLSGSNPKALEHAKLLAENLL 499
           DQY+NHIMNETGATV LRGR                LHL LS +N K LE AKLLAENLL
Sbjct: 283 DQYINHIMNETGATVSLRGRGSGNSESPNGEGQQP-LHLFLSSNNLKGLEDAKLLAENLL 341

Query: 498 DTICSECGASRVSSCKVYGA--------VXXXXXXXXXXXATISTA--------SFMXXX 367
           DTIC+ECGASR SSCKVYGA        V            T STA        S     
Sbjct: 342 DTICAECGASRASSCKVYGAVPPPQQLLVGVQSSGNELNVKTSSTACLASSAVSSTPTPL 401

Query: 366 XXXXXXXXXXXTFLSGTTPQPASFMSCGQLQPNMGSYSQPSVSSGTSYNGYGGIYPQATP 187
                       F  G   Q   F + GQ Q N+  Y  PS+++GTSY+GYGGIYPQATP
Sbjct: 402 VSPLTVPGVSTGFSQGAVSQCGGFFNSGQPQSNLVCYPPPSLTAGTSYSGYGGIYPQATP 461

Query: 186 LQQVALALR 160
           LQQVALALR
Sbjct: 462 LQQVALALR 470


>ref|NP_566850.3| protein RIK [Arabidopsis thaliana]
           gi|156633616|sp|Q9LIA4.2|RIK_ARATH RecName: Full=Protein
           RIK; AltName: Full=Rough sheath 2-interacting KH domain
           protein; Short=RS2-interacting KH domain protein
           gi|62997489|gb|AAY24687.1| KH-domain protein
           [Arabidopsis thaliana] gi|332644059|gb|AEE77580.1|
           protein RIK [Arabidopsis thaliana]
          Length = 578

 Score =  132 bits (333), Expect = 6e-29
 Identities = 86/180 (47%), Positives = 99/180 (55%), Gaps = 7/180 (3%)
 Frame = -3

Query: 678 DQYVNHIMNETGATVLLRGRXXXXXXXXXXXXXXXPLHLLLSGSNPKALEHAKLLAENLL 499
           DQY+NHIMNETGATV+LRGR               PLHLLLSGSNPK+++ AK LAENL+
Sbjct: 218 DQYINHIMNETGATVVLRGRGSGSLENQHGDEAQLPLHLLLSGSNPKSIDDAKRLAENLM 277

Query: 498 DTICSECGASRVSSCKVYGAVXXXXXXXXXXXAT-------ISTASFMXXXXXXXXXXXX 340
           DTI  E GASRVSS KVYGAV            +       IST   M            
Sbjct: 278 DTISVEFGASRVSSSKVYGAVPPPQQLISGAPGSDQENQNLISTYGLMTSIPITAPPYAV 337

Query: 339 XXTFLSGTTPQPASFMSCGQLQPNMGSYSQPSVSSGTSYNGYGGIYPQATPLQQVALALR 160
               ++  T     F     L  + G  SQP V+ GTSY+GY GIYPQATPLQQVA  L+
Sbjct: 338 SSFPVTPATSLYPQFPVMQSLGISNGGPSQP-VAGGTSYSGYAGIYPQATPLQQVAQVLK 396


>dbj|BAB02585.1| unnamed protein product [Arabidopsis thaliana]
          Length = 405

 Score =  132 bits (333), Expect = 6e-29
 Identities = 86/180 (47%), Positives = 99/180 (55%), Gaps = 7/180 (3%)
 Frame = -3

Query: 678 DQYVNHIMNETGATVLLRGRXXXXXXXXXXXXXXXPLHLLLSGSNPKALEHAKLLAENLL 499
           DQY+NHIMNETGATV+LRGR               PLHLLLSGSNPK+++ AK LAENL+
Sbjct: 163 DQYINHIMNETGATVVLRGRGSGSLENQHGDEAQLPLHLLLSGSNPKSIDDAKRLAENLM 222

Query: 498 DTICSECGASRVSSCKVYGAVXXXXXXXXXXXAT-------ISTASFMXXXXXXXXXXXX 340
           DTI  E GASRVSS KVYGAV            +       IST   M            
Sbjct: 223 DTISVEFGASRVSSSKVYGAVPPPQQLISGAPGSDQENQNLISTYGLMTSIPITAPPYAV 282

Query: 339 XXTFLSGTTPQPASFMSCGQLQPNMGSYSQPSVSSGTSYNGYGGIYPQATPLQQVALALR 160
               ++  T     F     L  + G  SQP V+ GTSY+GY GIYPQATPLQQVA  L+
Sbjct: 283 SSFPVTPATSLYPQFPVMQSLGISNGGPSQP-VAGGTSYSGYAGIYPQATPLQQVAQVLK 341


Top