BLASTX nr result

ID: Bupleurum21_contig00023438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023438
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170263.1| PREDICTED: T-complex protein 1 subunit gamma...   231   3e-59
ref|XP_004146724.1| PREDICTED: LOW QUALITY PROTEIN: T-complex pr...   231   3e-59
ref|XP_003534061.1| PREDICTED: T-complex protein 1 subunit gamma...   231   5e-59
ref|XP_002325286.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-59
ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma...   231   6e-59

>ref|XP_004170263.1| PREDICTED: T-complex protein 1 subunit gamma-like [Cucumis sativus]
          Length = 391

 Score =  231 bits (590), Expect = 3e-59
 Identities = 115/121 (95%), Positives = 120/121 (99%)
 Frame = +1

Query: 1   VNRADELQESDVGTGAGLFEVKKIGDEFFAYIVDCKDPKACTVLLRGASKDLLNEVERNL 180
           VNR DELQESDVGTGAGLFEVKKIGDEFFA+IVDCK+PKACTVLLRGASKDLLNEVERNL
Sbjct: 168 VNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKEPKACTVLLRGASKDLLNEVERNL 227

Query: 181 QDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTL 360
           QDAMSVARNI+KNPKLVPGGGATELTVSATLKQKSSS+EGIEKWPYEAAA+AFEAIPRTL
Sbjct: 228 QDAMSVARNILKNPKLVPGGGATELTVSATLKQKSSSVEGIEKWPYEAAALAFEAIPRTL 287

Query: 361 A 363
           A
Sbjct: 288 A 288


>ref|XP_004146724.1| PREDICTED: LOW QUALITY PROTEIN: T-complex protein 1 subunit
           gamma-like [Cucumis sativus]
          Length = 514

 Score =  231 bits (590), Expect = 3e-59
 Identities = 115/121 (95%), Positives = 120/121 (99%)
 Frame = +1

Query: 1   VNRADELQESDVGTGAGLFEVKKIGDEFFAYIVDCKDPKACTVLLRGASKDLLNEVERNL 180
           VNR DELQESDVGTGAGLFEVKKIGDEFFA+IVDCK+PKACTVLLRGASKDLLNEVERNL
Sbjct: 291 VNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKEPKACTVLLRGASKDLLNEVERNL 350

Query: 181 QDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTL 360
           QDAMSVARNI+KNPKLVPGGGATELTVSATLKQKSSS+EGIEKWPYEAAA+AFEAIPRTL
Sbjct: 351 QDAMSVARNILKNPKLVPGGGATELTVSATLKQKSSSVEGIEKWPYEAAALAFEAIPRTL 410

Query: 361 A 363
           A
Sbjct: 411 A 411


>ref|XP_003534061.1| PREDICTED: T-complex protein 1 subunit gamma-like [Glycine max]
          Length = 554

 Score =  231 bits (589), Expect = 5e-59
 Identities = 116/121 (95%), Positives = 119/121 (98%)
 Frame = +1

Query: 1   VNRADELQESDVGTGAGLFEVKKIGDEFFAYIVDCKDPKACTVLLRGASKDLLNEVERNL 180
           VNR DELQESDVGTGAGLFEVKKIGDE+FAYIVDCK+PKACTVLLRGASKDLLNEVERNL
Sbjct: 331 VNRPDELQESDVGTGAGLFEVKKIGDEYFAYIVDCKEPKACTVLLRGASKDLLNEVERNL 390

Query: 181 QDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTL 360
           QDAMSVARNIIKNPKLVPGGGATELTVSA LKQKSSSIEGIEKWPYEAAA+AFEAIPRTL
Sbjct: 391 QDAMSVARNIIKNPKLVPGGGATELTVSAALKQKSSSIEGIEKWPYEAAALAFEAIPRTL 450

Query: 361 A 363
           A
Sbjct: 451 A 451


>ref|XP_002325286.1| predicted protein [Populus trichocarpa] gi|222862161|gb|EEE99667.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  231 bits (589), Expect = 5e-59
 Identities = 116/121 (95%), Positives = 119/121 (98%)
 Frame = +1

Query: 1   VNRADELQESDVGTGAGLFEVKKIGDEFFAYIVDCKDPKACTVLLRGASKDLLNEVERNL 180
           VNR DELQESDVGTGAGLFEVKKIGDEFFA+IVDCKDPKACTVLLRGASKDLLNEVERNL
Sbjct: 332 VNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNL 391

Query: 181 QDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTL 360
           QDAMSVARNI+KNPKL+PGGGATELTVSA LKQKSSSIEGIEKWPYEAAAIAFEAIPRTL
Sbjct: 392 QDAMSVARNILKNPKLLPGGGATELTVSAALKQKSSSIEGIEKWPYEAAAIAFEAIPRTL 451

Query: 361 A 363
           A
Sbjct: 452 A 452


>ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
           gi|296084839|emb|CBI27721.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score =  231 bits (588), Expect = 6e-59
 Identities = 116/121 (95%), Positives = 118/121 (97%)
 Frame = +1

Query: 1   VNRADELQESDVGTGAGLFEVKKIGDEFFAYIVDCKDPKACTVLLRGASKDLLNEVERNL 180
           VNR DELQESDVGTGAGLFEVKKIGDEFFA+IVDCKDPKACTVLLRG SKDLLNEVERNL
Sbjct: 332 VNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGPSKDLLNEVERNL 391

Query: 181 QDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTL 360
           QDAM VARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAA+AFEAIPRTL
Sbjct: 392 QDAMCVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAVAFEAIPRTL 451

Query: 361 A 363
           A
Sbjct: 452 A 452


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