BLASTX nr result

ID: Bupleurum21_contig00023437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023437
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    64   2e-08

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/93 (39%), Positives = 55/93 (59%)
 Frame = +1

Query: 1   DRVMVNSHWLLAFPMAHAFFQPRGLSDHCPALITTGMQWKSGKKPFQMFLHLMNNDEFFP 180
           DRV+VN  W L FP++ A F P G+SDH P ++      ++ KKPF+ F   M++DEF P
Sbjct: 577 DRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMP 636

Query: 181 LIREAWSVSIEGDPWYVFTNKLERVKTSMILLN 279
           L+++ W  +  G P Y    KL ++K  + L N
Sbjct: 637 LVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFN 669


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/93 (39%), Positives = 54/93 (58%)
 Frame = +1

Query: 1   DRVMVNSHWLLAFPMAHAFFQPRGLSDHCPALITTGMQWKSGKKPFQMFLHLMNNDEFFP 180
           DRV+VN  W L FP++ A F P G+SDH P ++      ++ KKPF+ F   M++DEF P
Sbjct: 200 DRVLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMP 259

Query: 181 LIREAWSVSIEGDPWYVFTNKLERVKTSMILLN 279
           L+++ W  +  G P Y    KL + K  + L N
Sbjct: 260 LVKKVWDQNSGGCPMYQLCCKLRKQKQELKLFN 292


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/86 (40%), Positives = 52/86 (60%)
 Frame = +1

Query: 1   DRVMVNSHWLLAFPMAHAFFQPRGLSDHCPALITTGMQWKSGKKPFQMFLHLMNNDEFFP 180
           DRV+VN  W L FP++ A F P G+SDH P ++      ++ KKPF+ F   M++DEF P
Sbjct: 724 DRVLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMP 783

Query: 181 LIREAWSVSIEGDPWYVFTNKLERVK 258
           L+++ W  +  G P Y    KL ++K
Sbjct: 784 LVKKVWDQNSGGCPMYQLCCKLRKLK 809


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = +1

Query: 1   DRVMVNSHWLLAFPMAHAFFQPRGLSDHCPALITTGMQWKSGKKPFQMFLHLMNNDEFFP 180
           DRV+VN  W L FP++ A F P G+SDH P ++      ++ KKPF+ F   M++DEF P
Sbjct: 654 DRVLVNEKWNLNFPLSKARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMP 713

Query: 181 LIREAWSVSIEGDP 222
           L+++ W  +  G P
Sbjct: 714 LVKKVWDQNSGGCP 727


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
 Frame = +1

Query: 1   DRVMVNSHWLLAFPMAHAFFQPRGLSDHCPALITTGMQWKSGKKPFQMFLHLMNNDEFFP 180
           DR++VN HW   FP A+A F     SDH    +         K+PF+ F + ++N +F  
Sbjct: 201 DRILVNDHWNTLFPSAYANFGEPDFSDHSSCEVVLDPAVLKAKRPFRFFNYFLHNPDFLQ 260

Query: 181 LIREAW-SVSIEGDPWYVFTNKLERVKTSMILLNKK 285
           LIRE W S ++ G   Y  + KL+ +K  +   +++
Sbjct: 261 LIRENWYSCNVSGSAMYRVSKKLKHLKLPICCFSRE 296


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