BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023424
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   315   1e-83
emb|CBI28530.3| unnamed protein product [Vitis vinifera]              311   2e-82
ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containi...   299   7e-79
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t...   299   9e-79
ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi...   293   5e-77

>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  315 bits (807), Expect = 1e-83
 Identities = 155/250 (62%), Positives = 191/250 (76%), Gaps = 3/250 (1%)
 Frame = +2

Query: 308  QLCLSFYSTM---PPPVLASAKFRQVVCNPIGGLDDLEVSLSKVTVPLTSALVTQVLQSC 478
            +L L+ +STM   P PVL   +   VV N +G LDDLE SL ++    TS+L++Q+L +C
Sbjct: 23   RLPLALFSTMSLGPSPVLQ--ELCNVVSNGVGSLDDLEASLDRLDASFTSSLISQILDTC 80

Query: 479  KYEAAPRRLLRFFIWSRTTLDSKLEDGDFNFAIRYFAEMKDFTAIHILLSDFGKDGRTME 658
            K EA  RRLLRFF+WS    + KLED DFN+AI+ FAE KD  AI IL+SD   +GR M+
Sbjct: 81   KNEAPTRRLLRFFLWSSKKFNCKLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREMK 140

Query: 659  TSTFSLVAEALVKLGREDQALGIFKNLDKFKCTHNGATVTAIVSALCARGHVKRAEGVLL 838
              TF +VAE LV LGRED ALG+FKNLDKFKC+++  TVTAIV+ALC++GH +RAEGV+ 
Sbjct: 141  AQTFGIVAETLVSLGREDDALGLFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEGVVR 200

Query: 839  HHKNEILSVKPCIYRNLLYGWSVQGNVKEARRVVKEMKSAGISPDLYCFNTFLRCLCMTN 1018
            HHK++IL VKPCIYR+L YGWS Q NVKEARR++KEMKS GI PDL+C+NTFLRCLC  N
Sbjct: 201  HHKDKILGVKPCIYRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLCERN 260

Query: 1019 LKSNPSALVP 1048
            LKSNPS LVP
Sbjct: 261  LKSNPSGLVP 270


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  311 bits (797), Expect = 2e-82
 Identities = 150/237 (63%), Positives = 183/237 (77%)
 Frame = +2

Query: 338  PPPVLASAKFRQVVCNPIGGLDDLEVSLSKVTVPLTSALVTQVLQSCKYEAAPRRLLRFF 517
            P PVL   +   VV N +G LDDLE SL ++    TS+L++Q+L +CK EA  RRLLRFF
Sbjct: 5    PSPVLQ--ELCNVVSNGVGSLDDLEASLDRLDASFTSSLISQILDTCKNEAPTRRLLRFF 62

Query: 518  IWSRTTLDSKLEDGDFNFAIRYFAEMKDFTAIHILLSDFGKDGRTMETSTFSLVAEALVK 697
            +WS    + KLED DFN+AI+ FAE KD  AI IL+SD   +GR M+  TF +VAE LV 
Sbjct: 63   LWSSKKFNCKLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREMKAQTFGIVAETLVS 122

Query: 698  LGREDQALGIFKNLDKFKCTHNGATVTAIVSALCARGHVKRAEGVLLHHKNEILSVKPCI 877
            LGRED ALG+FKNLDKFKC+++  TVTAIV+ALC++GH +RAEGV+ HHK++IL VKPCI
Sbjct: 123  LGREDDALGLFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEGVVRHHKDKILGVKPCI 182

Query: 878  YRNLLYGWSVQGNVKEARRVVKEMKSAGISPDLYCFNTFLRCLCMTNLKSNPSALVP 1048
            YR+L YGWS Q NVKEARR++KEMKS GI PDL+C+NTFLRCLC  NLKSNPS LVP
Sbjct: 183  YRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLCERNLKSNPSGLVP 239


>ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
            mitochondrial-like [Glycine max]
          Length = 451

 Score =  299 bits (766), Expect = 7e-79
 Identities = 144/225 (64%), Positives = 179/225 (79%)
 Frame = +2

Query: 374  VVCNPIGGLDDLEVSLSKVTVPLTSALVTQVLQSCKYEAAPRRLLRFFIWSRTTLDSKLE 553
            +V + +GGLD+LE+SL+K    LTS+LV Q + S K+EA  RRLLRFF+WS   L  +LE
Sbjct: 13   IVMSTVGGLDELELSLNKFKDSLTSSLVAQAIDSSKHEAQTRRLLRFFLWSCKNLSHRLE 72

Query: 554  DGDFNFAIRYFAEMKDFTAIHILLSDFGKDGRTMETSTFSLVAEALVKLGREDQALGIFK 733
            D D+N A+R FAE KD+TA+ IL+ D  K+GR M+  TFSLVAE LVKLG+ED+ALGIFK
Sbjct: 73   DKDYNHALRVFAEKKDYTAMDILMGDLKKEGRAMDAETFSLVAENLVKLGKEDEALGIFK 132

Query: 734  NLDKFKCTHNGATVTAIVSALCARGHVKRAEGVLLHHKNEILSVKPCIYRNLLYGWSVQG 913
            NLDK+KC+ +  TVTAIV+ALC++GH KRAEGV+ HH ++I   KPCIYR+LLYGWSVQ 
Sbjct: 133  NLDKYKCSIDEFTVTAIVNALCSKGHGKRAEGVVWHHNDKITGTKPCIYRSLLYGWSVQR 192

Query: 914  NVKEARRVVKEMKSAGISPDLYCFNTFLRCLCMTNLKSNPSALVP 1048
            NVKEARR++KEMKS G+ PDL C+NTFLRCLC  NL+ NPS LVP
Sbjct: 193  NVKEARRIIKEMKSNGVIPDLLCYNTFLRCLCERNLRHNPSGLVP 237


>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 563

 Score =  299 bits (765), Expect = 9e-79
 Identities = 151/279 (54%), Positives = 197/279 (70%), Gaps = 11/279 (3%)
 Frame = +2

Query: 242  LLNPRCNHFYMCPP-------PISLHKQIQLCLSFYSTM----PPPVLASAKFRQVVCNP 388
            L++P+C HF +            S HK   L +S +ST+     PP+L       +V + 
Sbjct: 67   LVSPQCMHFLLNSAFKRYWLQNTSTHKFQLLSVSLFSTLHPISTPPLLQD--LCDIVTST 124

Query: 389  IGGLDDLEVSLSKVTVPLTSALVTQVLQSCKYEAAPRRLLRFFIWSRTTLDSKLEDGDFN 568
            +GGLDDLE  L+K    LTS LV QV+ S K+EA  RRLLRFF+WS   L + LED D+N
Sbjct: 125  VGGLDDLESCLNKFKGSLTSPLVAQVIDSVKHEAHTRRLLRFFLWSNKNLSNDLEDKDYN 184

Query: 569  FAIRYFAEMKDFTAIHILLSDFGKDGRTMETSTFSLVAEALVKLGREDQALGIFKNLDKF 748
            +A+R F E KD+TA+ ILL DF K GR ME  TF +VAE  VKLG+ED+ALGIFKNLDK+
Sbjct: 185  YALRVFIEKKDYTAMDILLGDFKKQGRVMEAQTFGVVAETYVKLGKEDEALGIFKNLDKY 244

Query: 749  KCTHNGATVTAIVSALCARGHVKRAEGVLLHHKNEILSVKPCIYRNLLYGWSVQGNVKEA 928
            KC  +  TVTAI++ALC++GH KRAEGV  HHK++I    PC+YR+LLYGWS++ NVKE+
Sbjct: 245  KCLIDEFTVTAIINALCSKGHAKRAEGVAWHHKDKIKGALPCVYRSLLYGWSLERNVKES 304

Query: 929  RRVVKEMKSAGISPDLYCFNTFLRCLCMTNLKSNPSALV 1045
            RR+++EMK+ G++PDL C+NTFLRCLC  NL++NPS LV
Sbjct: 305  RRIIQEMKTNGVTPDLVCYNTFLRCLCERNLRNNPSGLV 343


>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
            mitochondrial-like [Cucumis sativus]
            gi|449477571|ref|XP_004155060.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g61370,
            mitochondrial-like [Cucumis sativus]
          Length = 487

 Score =  293 bits (750), Expect = 5e-77
 Identities = 141/232 (60%), Positives = 181/232 (78%)
 Frame = +2

Query: 353  ASAKFRQVVCNPIGGLDDLEVSLSKVTVPLTSALVTQVLQSCKYEAAPRRLLRFFIWSRT 532
            A +K  +V+   IGGLD+LE SL+K T+ LTS+LVTQV+ S K EA  RRLLRFF+WS  
Sbjct: 49   AVSKLCEVISCTIGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLK 108

Query: 533  TLDSKLEDGDFNFAIRYFAEMKDFTAIHILLSDFGKDGRTMETSTFSLVAEALVKLGRED 712
             L+  LED DFN AIR+FA+ KD+TA++ILLS+  K  R M+  TF  VAEA VK+ RED
Sbjct: 109  KLNHTLEDEDFNNAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDRED 168

Query: 713  QALGIFKNLDKFKCTHNGATVTAIVSALCARGHVKRAEGVLLHHKNEILSVKPCIYRNLL 892
            +ALG+FKNL+K+KC H+  TV AI++ALC++GH KRAEGV+LHHK++I S   CIYR+LL
Sbjct: 169  EALGLFKNLEKYKCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLL 228

Query: 893  YGWSVQGNVKEARRVVKEMKSAGISPDLYCFNTFLRCLCMTNLKSNPSALVP 1048
            YGWS++ N KEARR++KEMKS G  PDL+C+NTFL+CLC  N++ NPS LVP
Sbjct: 229  YGWSIKKNTKEARRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVP 280