BLASTX nr result

ID: Bupleurum21_contig00023419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023419
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 ...   295   5e-78
ref|XP_002890179.1| hypothetical protein ARALYDRAFT_889058 [Arab...   280   2e-73
ref|NP_173110.2| uncharacterized protein [Arabidopsis thaliana] ...   279   3e-73
ref|XP_002310689.1| predicted protein [Populus trichocarpa] gi|2...   278   7e-73
gb|AAG10818.1|AC011808_6 Hypothetical protein [Arabidopsis thali...   272   5e-71

>ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 homolog [Vitis
           vinifera] gi|296082802|emb|CBI21807.3| unnamed protein
           product [Vitis vinifera]
          Length = 546

 Score =  295 bits (756), Expect = 5e-78
 Identities = 138/200 (69%), Positives = 167/200 (83%)
 Frame = -2

Query: 605 HTCRTAAETLEWIQAIINFIKPYSFLYEAHVVNFFKDRLWEAVDKEWMDCLRDEPVDNLL 426
           ++C +A+ETLEWI AI  F+ PYSFL  AHVVNFF DRLWEA+D++W+DCL++EPVD+LL
Sbjct: 9   YSCGSASETLEWIHAIHQFLTPYSFLINAHVVNFFNDRLWEAIDEDWIDCLKNEPVDHLL 68

Query: 425 LIPSGVSQDHWPASLKEFITTLKSLTLPREQADLNKILPDMDMKLLDKVITQGMNKKKQH 246
            IPSG+ QDHWP SL++F+  L SL LPR QA L  ILP+M M  LD V+TQGMN KK+H
Sbjct: 69  QIPSGIFQDHWPPSLQQFVIALSSLVLPRHQAGLESILPNMGMTSLDSVLTQGMNMKKKH 128

Query: 245 EVEVLGCVVSSIAKGVGVDSVIDVGAGQGYLAQVLSFQYQLSVIAIDACSHHGNITNARA 66
           EVEVL  VV SIA  VG D+++DVGAGQGYLAQVLSFQYQLSV+AID+CSHHGN+TNARA
Sbjct: 129 EVEVLSAVVDSIANSVGADTIVDVGAGQGYLAQVLSFQYQLSVVAIDSCSHHGNVTNARA 188

Query: 65  ERIKKHYAAKLLKSRSESKA 6
           ERIKKHYAA++ KS S S++
Sbjct: 189 ERIKKHYAAQMRKSGSGSRS 208


>ref|XP_002890179.1| hypothetical protein ARALYDRAFT_889058 [Arabidopsis lyrata subsp.
           lyrata] gi|297336021|gb|EFH66438.1| hypothetical protein
           ARALYDRAFT_889058 [Arabidopsis lyrata subsp. lyrata]
          Length = 520

 Score =  280 bits (716), Expect = 2e-73
 Identities = 134/199 (67%), Positives = 166/199 (83%)
 Frame = -2

Query: 605 HTCRTAAETLEWIQAIINFIKPYSFLYEAHVVNFFKDRLWEAVDKEWMDCLRDEPVDNLL 426
           ++C T AETLEWI AII+F+KP+SFL  AHVVNFFKD+ WEAVD+ WM CL+DE  +N+L
Sbjct: 6   YSCNTRAETLEWIIAIIDFLKPFSFLINAHVVNFFKDKQWEAVDEVWMSCLKDEKPENIL 65

Query: 425 LIPSGVSQDHWPASLKEFITTLKSLTLPREQADLNKILPDMDMKLLDKVITQGMNKKKQH 246
           LIPSGV QDHWPASLKEF+ TL+SL+ PREQADL+ IL D+D+  L  V++QGMN KK+H
Sbjct: 66  LIPSGVVQDHWPASLKEFVHTLRSLSFPREQADLHAILADVDLVPLSTVLSQGMNLKKKH 125

Query: 245 EVEVLGCVVSSIAKGVGVDSVIDVGAGQGYLAQVLSFQYQLSVIAIDACSHHGNITNARA 66
           EVEVL  VVSS+ K VG  +V+DVGAGQGYLAQVLSFQY+ SV+AID+ SHHG +T+ARA
Sbjct: 126 EVEVLSSVVSSVVKSVGAPTVVDVGAGQGYLAQVLSFQYKHSVVAIDSSSHHGTVTDARA 185

Query: 65  ERIKKHYAAKLLKSRSESK 9
            RI+KH+AA++ KS S +K
Sbjct: 186 ARIRKHFAAQMRKSGSGNK 204


>ref|NP_173110.2| uncharacterized protein [Arabidopsis thaliana]
           gi|190016010|gb|ACE62893.1| At1g16650 [Arabidopsis
           thaliana] gi|332191359|gb|AEE29480.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 521

 Score =  279 bits (714), Expect = 3e-73
 Identities = 134/198 (67%), Positives = 165/198 (83%)
 Frame = -2

Query: 602 TCRTAAETLEWIQAIINFIKPYSFLYEAHVVNFFKDRLWEAVDKEWMDCLRDEPVDNLLL 423
           +C+T AETLEWI AII+F+KP+SFL  AHVVNFFKD+ WEAV++EWM CL+DE  +N+LL
Sbjct: 7   SCKTRAETLEWITAIIDFLKPFSFLINAHVVNFFKDKQWEAVNEEWMSCLKDEKPENILL 66

Query: 422 IPSGVSQDHWPASLKEFITTLKSLTLPREQADLNKILPDMDMKLLDKVITQGMNKKKQHE 243
           IPSG  QDHWPASLK+F+ TL+SL+ PREQADL  IL D+DM  L  V++QGMN KK+HE
Sbjct: 67  IPSGGVQDHWPASLKKFVHTLRSLSFPREQADLQAILADVDMVPLSTVLSQGMNLKKKHE 126

Query: 242 VEVLGCVVSSIAKGVGVDSVIDVGAGQGYLAQVLSFQYQLSVIAIDACSHHGNITNARAE 63
           VEVL  VVSS+ K VG  +V+DVGAGQGYLAQVLSFQY+ SV+AID+ SHHG +T+ARA 
Sbjct: 127 VEVLSSVVSSVVKSVGAPTVVDVGAGQGYLAQVLSFQYKHSVVAIDSSSHHGKVTDARAA 186

Query: 62  RIKKHYAAKLLKSRSESK 9
           RIKKH+AA++ KS S +K
Sbjct: 187 RIKKHFAAQMRKSGSGNK 204


>ref|XP_002310689.1| predicted protein [Populus trichocarpa] gi|222853592|gb|EEE91139.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  278 bits (711), Expect = 7e-73
 Identities = 129/193 (66%), Positives = 157/193 (81%)
 Frame = -2

Query: 605 HTCRTAAETLEWIQAIINFIKPYSFLYEAHVVNFFKDRLWEAVDKEWMDCLRDEPVDNLL 426
           ++CRTA ETLEWI AI+NFIKPY+FL  AHV NFF  +LW+++D  W+ CLR+EPV NLL
Sbjct: 8   YSCRTAKETLEWINAILNFIKPYAFLTNAHVTNFFTHKLWQSIDPVWLHCLRNEPVQNLL 67

Query: 425 LIPSGVSQDHWPASLKEFITTLKSLTLPREQADLNKILPDMDMKLLDKVITQGMNKKKQH 246
           LIP G+ Q+HWPASLKEF+  LKSL  PREQA LNK+ P +++  L+ V+ QGMN KK+H
Sbjct: 68  LIPCGIIQEHWPASLKEFVLDLKSLAFPREQAHLNKLFPGVNVVSLNTVLAQGMNFKKKH 127

Query: 245 EVEVLGCVVSSIAKGVGVDSVIDVGAGQGYLAQVLSFQYQLSVIAIDACSHHGNITNARA 66
           EVEVL  VVSS+A  VG  +++DVGAGQGYLAQVLSFQYQ SV+AIDACSHHG +T  RA
Sbjct: 128 EVEVLSAVVSSVANSVGAQTIVDVGAGQGYLAQVLSFQYQHSVVAIDACSHHGTVTEKRA 187

Query: 65  ERIKKHYAAKLLK 27
           ERIKKHYAA++ K
Sbjct: 188 ERIKKHYAAQMRK 200


>gb|AAG10818.1|AC011808_6 Hypothetical protein [Arabidopsis thaliana]
          Length = 489

 Score =  272 bits (695), Expect = 5e-71
 Identities = 134/206 (65%), Positives = 165/206 (80%), Gaps = 8/206 (3%)
 Frame = -2

Query: 602 TCRTAAETLEWIQAIINFIKPYSFLYEAHVVNFFKDRLWEAVDKEWMDCLRDEPVDNLLL 423
           +C+T AETLEWI AII+F+KP+SFL  AHVVNFFKD+ WEAV++EWM CL+DE  +N+LL
Sbjct: 7   SCKTRAETLEWITAIIDFLKPFSFLINAHVVNFFKDKQWEAVNEEWMSCLKDEKPENILL 66

Query: 422 IPSGVSQDHWPASLKEFITTLKSLTLPREQADLNKILPDMDMKLLDKVITQGMNKKKQHE 243
           IPSG  QDHWPASLK+F+ TL+SL+ PREQADL  IL D+DM  L  V++QGMN KK+HE
Sbjct: 67  IPSGGVQDHWPASLKKFVHTLRSLSFPREQADLQAILADVDMVPLSTVLSQGMNLKKKHE 126

Query: 242 --------VEVLGCVVSSIAKGVGVDSVIDVGAGQGYLAQVLSFQYQLSVIAIDACSHHG 87
                   VEVL  VVSS+ K VG  +V+DVGAGQGYLAQVLSFQY+ SV+AID+ SHHG
Sbjct: 127 VTYYGIMQVEVLSSVVSSVVKSVGAPTVVDVGAGQGYLAQVLSFQYKHSVVAIDSSSHHG 186

Query: 86  NITNARAERIKKHYAAKLLKSRSESK 9
            +T+ARA RIKKH+AA++ KS S +K
Sbjct: 187 KVTDARAARIKKHFAAQMRKSGSGNK 212


Top