BLASTX nr result

ID: Bupleurum21_contig00023404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023404
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002513434.1| ATP binding protein, putative [Ricinus commu...   100   9e-20
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              100   1e-19
ref|XP_002299258.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/85 (55%), Positives = 58/85 (68%)
 Frame = +1

Query: 16  KDQFLLSIWYNNLADKTIVWYGNDRNTVQKGSKVELTADRGLVLTDSEGKESWSSGPAQS 195
           KD FLLSIWY  + +KTIVWY N  N   + SKVEL  D GLVLTD +G   WSSG    
Sbjct: 36  KDHFLLSIWYAKIPEKTIVWYANGDNPAPRESKVELRGDSGLVLTDPQGNLIWSSGSLLG 95

Query: 196 EVSSGILDDTGNFMIFNRGSTKLWD 270
            VSSG+++DTGNF++ N  S +LW+
Sbjct: 96  TVSSGVMNDTGNFVLQNSNSFRLWE 120


>ref|XP_002513434.1| ATP binding protein, putative [Ricinus communis]
           gi|223547342|gb|EEF48837.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 800

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/85 (55%), Positives = 60/85 (70%)
 Frame = +1

Query: 13  DKDQFLLSIWYNNLADKTIVWYGNDRNTVQKGSKVELTADRGLVLTDSEGKESWSSGPAQ 192
           +K+ +LL+I YN ++DKTIVWY N  +    GSKVELTADRGLVLT  +GKE W SG   
Sbjct: 60  NKNLYLLAICYNKISDKTIVWYANGDDPAPTGSKVELTADRGLVLTSPQGKEIWKSGINI 119

Query: 193 SEVSSGILDDTGNFMIFNRGSTKLW 267
            + + G+++DTGNF I N G  KLW
Sbjct: 120 GDAARGMMNDTGNFRIVNTGGEKLW 144


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/92 (52%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
 Frame = +1

Query: 13  DKDQFLLSIWYNNLADKTIVWYG-----NDRNTVQKGSKVELTADRGLVLTDSEGKESWS 177
           +KD FLLSIWY  + +KT+VWY       D   V +GSK+ELT DRGL+L D +G + WS
Sbjct: 91  NKDYFLLSIWYEKIPEKTVVWYAIGEDPTDDPAVPRGSKLELTDDRGLLLADPQGNQIWS 150

Query: 178 SG-PAQSEVSSGILDDTGNFMIFNRGSTKLWD 270
           SG P  + VSSG+++DTGNF++ NR S +LW+
Sbjct: 151 SGIPPGAAVSSGVMNDTGNFVLQNRNSFRLWE 182


>ref|XP_002299258.1| predicted protein [Populus trichocarpa] gi|222846516|gb|EEE84063.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1   QMQGDKDQFLLSIWYNNLADKTIVWYGNDRNTVQKGSKVELTADRGLVLTDSEGKESWSS 180
           Q+  + D FLL+IWY  + DKT+VWY N  N   +GSKVELTADRGLVL D    E W S
Sbjct: 32  QISKNDDFFLLAIWYYKIPDKTVVWYANGGNPAPRGSKVELTADRGLVLKDPRDSEIWRS 91

Query: 181 GPAQSEVSSGILDDTGNFMIFN--RGSTKLW 267
           G +   V+ G+++DTGNF++FN   GS  +W
Sbjct: 92  GFSGGTVTHGVMNDTGNFVLFNVSSGSQAVW 122


>ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|222839594|gb|EEE77931.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/90 (50%), Positives = 61/90 (67%)
 Frame = +1

Query: 1   QMQGDKDQFLLSIWYNNLADKTIVWYGNDRNTVQKGSKVELTADRGLVLTDSEGKESWSS 180
           Q+ G+KD FLL+IWY+ + DKTIVWY N       GSK  LTA+RG+ LTD +G+E W S
Sbjct: 55  QLYGNKDLFLLAIWYDKIPDKTIVWYANGDKPAPTGSKAVLTANRGISLTDPQGRELWRS 114

Query: 181 GPAQSEVSSGILDDTGNFMIFNRGSTKLWD 270
                +V+ G + DTGNF++ +R S KLW+
Sbjct: 115 ETIIGDVAYGAMTDTGNFVLRDRVSDKLWE 144


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