BLASTX nr result

ID: Bupleurum21_contig00023389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023389
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638049.1| ATP-binding cassette sub-family F member [Me...   309   2e-82
ref|XP_002314297.1| ABC transporter family protein [Populus tric...   307   5e-82
ref|XP_002331473.1| ABC transporter family protein [Populus tric...   307   7e-82
dbj|BAA94511.1| ABC transporter homolog [Populus nigra]               307   7e-82
gb|AFO64340.1| ABC transporter GCN1 [Hevea brasiliensis]              306   9e-82

>ref|XP_003638049.1| ATP-binding cassette sub-family F member [Medicago truncatula]
           gi|355503984|gb|AES85187.1| ATP-binding cassette
           sub-family F member [Medicago truncatula]
          Length = 622

 Score =  309 bits (791), Expect = 2e-82
 Identities = 151/158 (95%), Positives = 155/158 (98%)
 Frame = +3

Query: 3   ELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD 182
           ELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV RD
Sbjct: 330 ELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRD 389

Query: 183 KVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKKLDFGVDLDSRVALVGPNGAGKSTL 362
           K+LVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYK +DFGVDLDSR+ALVGPNGAGKST 
Sbjct: 390 KILVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAGKSTF 449

Query: 363 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLEM 476
           LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLE+
Sbjct: 450 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLEL 487


>ref|XP_002314297.1| ABC transporter family protein [Populus trichocarpa]
           gi|222850705|gb|EEE88252.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 599

 Score =  307 bits (787), Expect = 5e-82
 Identities = 151/158 (95%), Positives = 157/158 (99%)
 Frame = +3

Query: 3   ELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD 182
           ELEENQMKQY+WEQ+QI+SMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTE+VARD
Sbjct: 307 ELEENQMKQYKWEQDQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTERVARD 366

Query: 183 KVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKKLDFGVDLDSRVALVGPNGAGKSTL 362
           +VLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYK LDFGVDLDSRVALVGPNGAGKSTL
Sbjct: 367 QVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTL 426

Query: 363 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLEM 476
           LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLE+
Sbjct: 427 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLEL 464


>ref|XP_002331473.1| ABC transporter family protein [Populus trichocarpa]
           gi|222873551|gb|EEF10682.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 602

 Score =  307 bits (786), Expect = 7e-82
 Identities = 150/158 (94%), Positives = 156/158 (98%)
 Frame = +3

Query: 3   ELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD 182
           ELEENQMKQY+WEQ+QIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD
Sbjct: 310 ELEENQMKQYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD 369

Query: 183 KVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKKLDFGVDLDSRVALVGPNGAGKSTL 362
           K+LVFRFV+VGKLPPPVLQFVEVTFGYTPDNLIYK +DFGVDLDSR+ALVGPNGAGKSTL
Sbjct: 370 KILVFRFVNVGKLPPPVLQFVEVTFGYTPDNLIYKSIDFGVDLDSRIALVGPNGAGKSTL 429

Query: 363 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLEM 476
           LKLMTGDLVPLDGMVRRHNHLRIAQFHQHL EKLDLEM
Sbjct: 430 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDLEM 467


>dbj|BAA94511.1| ABC transporter homolog [Populus nigra]
          Length = 565

 Score =  307 bits (786), Expect = 7e-82
 Identities = 150/158 (94%), Positives = 156/158 (98%)
 Frame = +3

Query: 3   ELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD 182
           ELEENQMKQY+WEQ+QIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD
Sbjct: 311 ELEENQMKQYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD 370

Query: 183 KVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKKLDFGVDLDSRVALVGPNGAGKSTL 362
           K+LVFRFV+VGKLPPPVLQFVEVTFGYTPDNLIYK +DFGVDLDSR+ALVGPNGAGKSTL
Sbjct: 371 KILVFRFVNVGKLPPPVLQFVEVTFGYTPDNLIYKSIDFGVDLDSRIALVGPNGAGKSTL 430

Query: 363 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLEM 476
           LKLMTGDLVPLDGMVRRHNHLRIAQFHQHL EKLDLEM
Sbjct: 431 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDLEM 468


>gb|AFO64340.1| ABC transporter GCN1 [Hevea brasiliensis]
          Length = 605

 Score =  306 bits (785), Expect = 9e-82
 Identities = 151/158 (95%), Positives = 154/158 (97%)
 Frame = +3

Query: 3   ELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVARD 182
           ELEENQMKQY+WEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV RD
Sbjct: 313 ELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRD 372

Query: 183 KVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKKLDFGVDLDSRVALVGPNGAGKSTL 362
           KVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYK LDFGVDLDSR+ALVGPNGAGKSTL
Sbjct: 373 KVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKSTL 432

Query: 363 LKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLEM 476
           LKLMTGDLVP DGMVRRHNHLRIAQFHQHL EKLDL+M
Sbjct: 433 LKLMTGDLVPTDGMVRRHNHLRIAQFHQHLAEKLDLDM 470


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