BLASTX nr result

ID: Bupleurum21_contig00023377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023377
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM15884.1|AF492566_1 GIA/RGA-like gibberellin response modul...   106   2e-21
gb|AAM15899.1|AF492582_1 GIA/RGA-like gibberellin response modul...   105   3e-21
gb|AAM15881.1|AF492563_1 GIA/RGA-like gibberellin response modul...   105   4e-21
ref|NP_001234365.1| DELLA protein GAI [Solanum lycopersicum] gi|...   104   7e-21
gb|AAM15882.1|AF492564_1 GIA/RGA-like gibberellin response modul...   104   8e-21

>gb|AAM15884.1|AF492566_1 GIA/RGA-like gibberellin response modulator [Dubautia menziesii]
          Length = 536

 Score =  106 bits (264), Expect = 2e-21
 Identities = 70/168 (41%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
 Frame = -1

Query: 488 MDELLAVLGYKVRASDMTVIAKKLEQLEMAMGIDTVNQLSETSHYNPADISTWVESMLGX 309
           MDELL VLGYKV+++DM  +A+KLEQLEM MG D V QLS+T HYNP+D+S WV+SML  
Sbjct: 23  MDELLEVLGYKVKSTDMADVAQKLEQLEMVMGEDGVLQLSDTVHYNPSDLSGWVQSMLSV 82

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXFGTTFSHSQSNSTV--DYNSDLRAIPGGVIYG-- 141
                                           H +  S +  D   DLRAI GG IYG  
Sbjct: 83  LNDNTPPSDHIVLSGDSSTTMIDFSNSSEIVVHGKQGSKMHEDDPYDLRAIAGGAIYGGE 142

Query: 140 TGDSSHHNNKRLKKQQSSSGG--XXXXXXXXXXXXVDSQEAGVRLVHT 3
           +  S   N   +K+ +S++ G              VDSQEAG+RLVHT
Sbjct: 143 SESSVRGNGNGIKRMKSTAVGSVDVQPESPRPVVLVDSQEAGIRLVHT 190


>gb|AAM15899.1|AF492582_1 GIA/RGA-like gibberellin response modulator [Argyroxiphium
           sandwicense subsp. macrocephalum]
          Length = 541

 Score =  105 bits (263), Expect = 3e-21
 Identities = 69/173 (39%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
 Frame = -1

Query: 488 MDELLAVLGYKVRASDMTVIAKKLEQLEMAMGIDTVNQLSETSHYNPADISTWVESMLGX 309
           MDELL VLGYKV+++DM  +A+KLEQLEM MG D + QLS+T HYNP+D+S WV+SML  
Sbjct: 23  MDELLEVLGYKVKSTDMADVAQKLEQLEMVMGEDGILQLSDTVHYNPSDLSGWVQSMLLV 82

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXFGTTF-SHSQSNSTVDYNSDLRAIPGGVIY---- 144
                                     F +    H +  S +  + DLRAI GG IY    
Sbjct: 83  LNDNNNTAHDSGHILLPGDSSTTMIDFSSEIVVHGKPGSKIHLDDDLRAIAGGAIYRSES 142

Query: 143 -----GTGDSSHHNNKRLKKQQSSSG-GXXXXXXXXXXXXVDSQEAGVRLVHT 3
                G G+ + +  KR+K   + S               VDSQEAG+RLVHT
Sbjct: 143 ESSMPGNGNPNENGVKRMKTTAAGSEVVDVQPESPRPVVLVDSQEAGIRLVHT 195


>gb|AAM15881.1|AF492563_1 GIA/RGA-like gibberellin response modulator [Dubautia arborea]
          Length = 538

 Score =  105 bits (262), Expect = 4e-21
 Identities = 70/170 (41%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
 Frame = -1

Query: 488 MDELLAVLGYKVRASDMTVIAKKLEQLEMAMGIDTVNQLSETSHYNPADISTWVESMLGX 309
           MDELL VLGYKV+++DM  +A+KLEQLEM MG D V QLS+T HYNP+D+S WV+SML  
Sbjct: 23  MDELLEVLGYKVKSTDMADVAQKLEQLEMVMGEDGVLQLSDTVHYNPSDLSGWVQSMLSV 82

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXFGTTFSHSQSNSTV--DYNSDLRAIPGGVIYGTG 135
                                           H +  S +  D   DLRAI GG IYG  
Sbjct: 83  LNENTPPSDHIVLSGDSSTTMIDFSNSSEIVVHGKQGSKMHEDDPYDLRAIAGGAIYGGE 142

Query: 134 DSS----HHNNKRLKKQQSSSGG--XXXXXXXXXXXXVDSQEAGVRLVHT 3
             S    + N   +K+ +S++ G              VDSQEAG+RLVHT
Sbjct: 143 SESSVRGNGNGNGIKRMKSTAVGSVDVQPESPRRVVLVDSQEAGIRLVHT 192


>ref|NP_001234365.1| DELLA protein GAI [Solanum lycopersicum]
           gi|75146039|sp|Q7Y1B6.1|GAI_SOLLC RecName: Full=DELLA
           protein GAI; AltName: Full=Gibberellic acid-insensitive
           mutant protein gi|31322802|gb|AAP22369.1| GAI-like
           protein [Solanum lycopersicum]
          Length = 588

 Score =  104 bits (260), Expect = 7e-21
 Identities = 70/179 (39%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
 Frame = -1

Query: 515 LWREDETDT----MDELLAVLGYKVRASDMTVIAKKLEQLEMAMGI---DTVNQLS-ETS 360
           +W EDE +     MDELLAVLGYKV++SDM  +A+KLEQLEMAMG    D +  LS +T 
Sbjct: 28  IWEEDEEEKPDAGMDELLAVLGYKVKSSDMADVAQKLEQLEMAMGTTMEDGITHLSTDTV 87

Query: 359 HYNPADISTWVESMLGXXXXXXXXXXXXXXXXXXXXXXXXXXXFGTTFSHSQSNSTVDYN 180
           H NP+D++ WV+SML                                FS +   ST+  +
Sbjct: 88  HKNPSDMAGWVQSMLSSISTNFDMCNQENDVLVSGCGSSSSI---IDFSQNHRTSTIS-D 143

Query: 179 SDLRAIPGGVIYGTGDSSHHNNKRLKKQQSSSGGXXXXXXXXXXXXVDSQEAGVRLVHT 3
            DLRAIPGG ++ +  +  H +       +SS              VDSQE GVRLVHT
Sbjct: 144 DDLRAIPGGAVFNSDSNKRHRSTTSSFSTTSSSMVTDSSATRPVVLVDSQETGVRLVHT 202


>gb|AAM15882.1|AF492564_1 GIA/RGA-like gibberellin response modulator [Dubautia ciliolata
           subsp. glutinosa]
          Length = 536

 Score =  104 bits (259), Expect = 8e-21
 Identities = 70/168 (41%), Positives = 87/168 (51%), Gaps = 6/168 (3%)
 Frame = -1

Query: 488 MDELLAVLGYKVRASDMTVIAKKLEQLEMAMGIDTVNQLSETSHYNPADISTWVESMLGX 309
           MDELL VLGYKV+++DM  +A+KLEQLEM MG D V QLS+T HYNP+D+S WV+SML  
Sbjct: 23  MDELLEVLGYKVKSTDMADVAQKLEQLEMVMGEDGVLQLSDTVHYNPSDLSGWVQSMLSV 82

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXFGTTFSHSQSNSTV--DYNSDLRAIPGGVIYG-- 141
                                           H +  S +  D   DLRAI GG IYG  
Sbjct: 83  LNDNTPPSDHMVLSGDSSTTMIDFSNSSKIVVHGKQGSKMHEDDPYDLRAIAGGAIYGGE 142

Query: 140 TGDSSHHNNKRLKKQQSSSGG--XXXXXXXXXXXXVDSQEAGVRLVHT 3
           +  S   N    K+ +S++ G              VDSQEAG+RLVHT
Sbjct: 143 SESSVRGNGNGHKRMKSTAVGSVDVQPESPRPVVLVDSQEAGIRLVHT 190


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