BLASTX nr result

ID: Bupleurum21_contig00023359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023359
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525488.1| ATP binding protein, putative [Ricinus commu...   105   7e-21
emb|CAN79646.1| hypothetical protein VITISV_033790 [Vitis vinifera]    94   3e-17
ref|XP_002273755.1| PREDICTED: SCY1-like protein 2 [Vitis vinife...    92   1e-16
ref|XP_002327308.1| predicted protein [Populus trichocarpa] gi|2...    87   3e-15
ref|XP_003605414.1| SCY1-like protein [Medicago truncatula] gi|3...    84   3e-14

>ref|XP_002525488.1| ATP binding protein, putative [Ricinus communis]
            gi|223535167|gb|EEF36846.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 916

 Score =  105 bits (263), Expect = 7e-21
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 5/124 (4%)
 Frame = +2

Query: 5    PTTSGVAGSS-KNVPMGQYANNPATNSSTSTLNGLNFQSN-NSSWTFSTQNPVEPLKQNQ 178
            P TSG + +S  N  +G  ANN  TN STST + LNFQSN N+SW F+ Q+  EPLK NQ
Sbjct: 761  PRTSGTSSASGNNGSVGLLANNYVTNLSTSTPSSLNFQSNGNNSWAFNNQSSFEPLKSNQ 820

Query: 179  MRSTGSLSN--NSQGSLDFMKNSQPNSAWGT-TPQKSTDIGSIFSTNKGDQTALRLAPPP 349
              + GSL++  +SQ S+  MK +Q  S  G+   +KSTD+GSIF ++K +Q A +LAPPP
Sbjct: 821  GLNAGSLNSGVSSQNSIGLMKQNQNMSILGSYNDKKSTDLGSIFGSSKNEQLAPKLAPPP 880

Query: 350  LTAV 361
             TAV
Sbjct: 881  STAV 884


>emb|CAN79646.1| hypothetical protein VITISV_033790 [Vitis vinifera]
          Length = 763

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
 Frame = +2

Query: 20   VAGSSKNVPMGQYANNPATNSSTSTLNGLNFQSNNS-SWTFSTQNPVEPLKQNQMRSTGS 196
            V+GSS N  +    N   T SS+  +N + FQ+N+  SW F+TQ  VEP +QNQ  ST +
Sbjct: 609  VSGSSNNGIVASSNNKYGTTSSSGAMNDVIFQTNSDMSWAFNTQKLVEPSRQNQGNSTFN 668

Query: 197  LSN-----NSQGSLDFMKNSQPNSAWGT-TPQKSTDIGSIFSTNKGDQTALRLAPPPLTA 358
             ++     NSQ S+ FMK +Q  S  G+   +K+TD+GSIF+++K D  A RLAPPP TA
Sbjct: 669  STSLNSGLNSQSSIGFMKQNQGISTLGSYNDKKTTDLGSIFASSKNDHAAPRLAPPPPTA 728

Query: 359  VXXXXXXXXXNQAQS 403
            V         NQ  S
Sbjct: 729  VGRGRGRGRGNQGHS 743


>ref|XP_002273755.1| PREDICTED: SCY1-like protein 2 [Vitis vinifera]
            gi|297734819|emb|CBI17053.3| unnamed protein product
            [Vitis vinifera]
          Length = 931

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 57/135 (42%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
 Frame = +2

Query: 20   VAGSSKNVPMGQYANNPATNSSTSTLNGLNFQSNNS-SWTFSTQNPVEPLKQNQMRSTGS 196
            V+GSS N  +    N   T S +  +N + FQ+N+  SW F+TQ  VEP +QNQ  ST +
Sbjct: 777  VSGSSNNGIVASSNNKYGTTSRSGAMNDVIFQTNSDMSWAFNTQKLVEPSRQNQGNSTFN 836

Query: 197  LSN-----NSQGSLDFMKNSQPNSAWGT-TPQKSTDIGSIFSTNKGDQTALRLAPPPLTA 358
             ++     NSQ S+ FMK +Q  S  G+   +K+TD+GSIF+++K D  A RLAPPP TA
Sbjct: 837  STSLNSGLNSQSSIGFMKQNQGISTLGSYNDKKTTDLGSIFASSKNDHAAPRLAPPPPTA 896

Query: 359  VXXXXXXXXXNQAQS 403
            V         NQ  S
Sbjct: 897  VGRGRGRGRGNQGHS 911


>ref|XP_002327308.1| predicted protein [Populus trichocarpa] gi|222835678|gb|EEE74113.1|
            predicted protein [Populus trichocarpa]
          Length = 931

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 55/129 (42%), Positives = 81/129 (62%), Gaps = 9/129 (6%)
 Frame = +2

Query: 2    RPT-TSGVAGSSKNVPMGQYANNPATNSSTSTLNGLNFQSN-NSSWTFSTQNPVEPLKQN 175
            RP+ TS  +G+S N   G   N+ ++N  T+T + +NFQ+  N SW F+ Q+ ++PLK N
Sbjct: 769  RPSGTSSGSGASNNGTTGLQPNSYSSNLITNTPDIMNFQNKGNISWAFNNQSSLDPLKPN 828

Query: 176  QMRS---TGSLSN---NSQGSLDFMKNSQPNSAWGT-TPQKSTDIGSIFSTNKGDQTALR 334
            Q  S   +GS  N   N Q S+ F+K +Q  S  G+    K TD+GSIF ++K +QTA++
Sbjct: 829  QGTSAVNSGSSLNSGPNPQSSIGFLKQNQNTSTLGSYNHTKPTDLGSIFGSSKNEQTAIK 888

Query: 335  LAPPPLTAV 361
            LAPPP +AV
Sbjct: 889  LAPPPSSAV 897


>ref|XP_003605414.1| SCY1-like protein [Medicago truncatula] gi|355506469|gb|AES87611.1|
           SCY1-like protein [Medicago truncatula]
          Length = 632

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 12/149 (8%)
 Frame = +2

Query: 14  SGVAGSSKNVPMGQYANNPATNSSTSTLNGLNFQSNNSSWTFSTQNPVEPLKQNQMRSTG 193
           SGV+G+S N   G   N    NS TS  + L  Q++N+ W+  +QN VE +  N   ++ 
Sbjct: 475 SGVSGNSNNGISGMALNKIGHNSMTSNSSNLGLQASNN-WSVKSQNSVESIGLNPRNASS 533

Query: 194 SLSNNSQG-----SLDFMKNSQP-------NSAWGTTPQKSTDIGSIFSTNKGDQTALRL 337
           S+SN + G     SL F+K SQ        +S++     KSTD+GSIFS+NK +Q A RL
Sbjct: 534 SISNPNNGFEPQSSLGFLKQSQAFPVSNAVSSSYNNV--KSTDLGSIFSSNKNEQFAPRL 591

Query: 338 APPPLTAVXXXXXXXXXNQAQSRGNTSSQ 424
           APPP T V          + + RG TSS+
Sbjct: 592 APPPSTTV-------GRGRGRGRGATSSR 613


Top