BLASTX nr result

ID: Bupleurum21_contig00023338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023338
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40527.3| unnamed protein product [Vitis vinifera]              249   2e-64
ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 isoform ...   249   2e-64
ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatul...   239   2e-61
ref|XP_003549172.1| PREDICTED: DNA-binding protein RHL1-like [Gl...   236   2e-60
ref|XP_004137530.1| PREDICTED: DNA-binding protein RHL1-like [Cu...   234   7e-60

>emb|CBI40527.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  249 bits (637), Expect = 2e-64
 Identities = 125/186 (67%), Positives = 141/186 (75%)
 Frame = -1

Query: 562 ETIERNRLKKLAISNNVLSNDGXXXXXXXXXXXXXXXXXXXXXSKIVTKHHGRDILKKSQ 383
           E  ER R KKLA S N+LS+                       SK V KHHG+DILKKSQ
Sbjct: 19  EAEERKRRKKLAFSKNLLSDT------------PSKAFSALSPSKTVIKHHGKDILKKSQ 66

Query: 382 RKNKFLLSFPGLLAPVSGGKIGELKDLGTKNPILYLEFPQGKMKLFGTIVFPKNRYLTMQ 203
           RKN+FL SFPGLLAP++GGKIGELKDLGTKNPILYL+FPQG+MKLFGTIV+PKNRYLT+ 
Sbjct: 67  RKNRFLFSFPGLLAPIAGGKIGELKDLGTKNPILYLDFPQGQMKLFGTIVYPKNRYLTLH 126

Query: 202 FSRGGKNVMCEDNIDTMIVFSEAWWIGNKDENPEEVRLEFPKEMNMVQHTDYDFKGGAGA 23
           FSRGGKNVMCED  D MIVFS+AWWIG K+ENPEE RLEFPKE++  Q  +YDFKGGAG 
Sbjct: 127 FSRGGKNVMCEDYFDNMIVFSDAWWIGRKEENPEEARLEFPKELSEGQSVEYDFKGGAGM 186

Query: 22  ACERKQ 5
           A + KQ
Sbjct: 187 ASDSKQ 192


>ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 isoform 1 [Vitis vinifera]
           gi|359489730|ref|XP_003633969.1| PREDICTED: DNA-binding
           protein RHL1 isoform 2 [Vitis vinifera]
          Length = 449

 Score =  249 bits (637), Expect = 2e-64
 Identities = 125/186 (67%), Positives = 141/186 (75%)
 Frame = -1

Query: 562 ETIERNRLKKLAISNNVLSNDGXXXXXXXXXXXXXXXXXXXXXSKIVTKHHGRDILKKSQ 383
           E  ER R KKLA S N+LS+                       SK V KHHG+DILKKSQ
Sbjct: 19  EAEERKRRKKLAFSKNLLSDT------------PSKAFSALSPSKTVIKHHGKDILKKSQ 66

Query: 382 RKNKFLLSFPGLLAPVSGGKIGELKDLGTKNPILYLEFPQGKMKLFGTIVFPKNRYLTMQ 203
           RKN+FL SFPGLLAP++GGKIGELKDLGTKNPILYL+FPQG+MKLFGTIV+PKNRYLT+ 
Sbjct: 67  RKNRFLFSFPGLLAPIAGGKIGELKDLGTKNPILYLDFPQGQMKLFGTIVYPKNRYLTLH 126

Query: 202 FSRGGKNVMCEDNIDTMIVFSEAWWIGNKDENPEEVRLEFPKEMNMVQHTDYDFKGGAGA 23
           FSRGGKNVMCED  D MIVFS+AWWIG K+ENPEE RLEFPKE++  Q  +YDFKGGAG 
Sbjct: 127 FSRGGKNVMCEDYFDNMIVFSDAWWIGRKEENPEEARLEFPKELSEGQSVEYDFKGGAGM 186

Query: 22  ACERKQ 5
           A + KQ
Sbjct: 187 ASDSKQ 192


>ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatula]
           gi|355495168|gb|AES76371.1| DNA-binding protein RHL1
           [Medicago truncatula]
          Length = 435

 Score =  239 bits (610), Expect = 2e-61
 Identities = 119/181 (65%), Positives = 139/181 (76%), Gaps = 1/181 (0%)
 Frame = -1

Query: 562 ETIERNRLKKLAISNNVLSNDGXXXXXXXXXXXXXXXXXXXXXSKIVTKHHGRDILKKSQ 383
           ETIER RLK LA SNNVLS                        S IV KHHG+DI+KKSQ
Sbjct: 22  ETIERKRLKSLAFSNNVLSET------------KARSSIHLNPSSIVAKHHGKDIIKKSQ 69

Query: 382 RKN-KFLLSFPGLLAPVSGGKIGELKDLGTKNPILYLEFPQGKMKLFGTIVFPKNRYLTM 206
           RK+ ++L SFPGL AP+ GGKIG+LKDLGTKNPILYL+FPQG+MKLFGTI++PKNRYLT+
Sbjct: 70  RKSSRYLFSFPGLFAPIGGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTILYPKNRYLTL 129

Query: 205 QFSRGGKNVMCEDNIDTMIVFSEAWWIGNKDENPEEVRLEFPKEMNMVQHTDYDFKGGAG 26
           QFS+GGK+VMCED  D MIVFS+AWWIG KDENPEE +LEFPKE+   + T++DFKGGAG
Sbjct: 130 QFSKGGKSVMCEDYFDNMIVFSDAWWIGTKDENPEEAKLEFPKELYEGKQTEHDFKGGAG 189

Query: 25  A 23
           A
Sbjct: 190 A 190


>ref|XP_003549172.1| PREDICTED: DNA-binding protein RHL1-like [Glycine max]
          Length = 415

 Score =  236 bits (602), Expect = 2e-60
 Identities = 115/181 (63%), Positives = 140/181 (77%), Gaps = 1/181 (0%)
 Frame = -1

Query: 562 ETIERNRLKKLAISNNVLSNDGXXXXXXXXXXXXXXXXXXXXXSKIVTKHHGRDILKKSQ 383
           ETIER RLK LAIS+N+LS                        S +V KHHG+DI+KKSQ
Sbjct: 23  ETIERKRLKSLAISHNILSET------------PARSSVQLNPSSVVAKHHGKDIIKKSQ 70

Query: 382 RKN-KFLLSFPGLLAPVSGGKIGELKDLGTKNPILYLEFPQGKMKLFGTIVFPKNRYLTM 206
           RK+ ++L SFPGL+AP++GGKIG+LKDLGTKNP+LYL+FPQG+MKLFGTIV+PKNRYLT+
Sbjct: 71  RKSSRYLFSFPGLIAPIAGGKIGDLKDLGTKNPVLYLDFPQGQMKLFGTIVYPKNRYLTL 130

Query: 205 QFSRGGKNVMCEDNIDTMIVFSEAWWIGNKDENPEEVRLEFPKEMNMVQHTDYDFKGGAG 26
           QF +GGK+VMCED  D MIVFS+AWWIG K+ENPEE +LEFPKE+     ++YDFKGGAG
Sbjct: 131 QFPKGGKSVMCEDYFDNMIVFSDAWWIGRKEENPEEAKLEFPKELYEGHQSEYDFKGGAG 190

Query: 25  A 23
           A
Sbjct: 191 A 191


>ref|XP_004137530.1| PREDICTED: DNA-binding protein RHL1-like [Cucumis sativus]
          Length = 430

 Score =  234 bits (597), Expect = 7e-60
 Identities = 118/179 (65%), Positives = 133/179 (74%)
 Frame = -1

Query: 562 ETIERNRLKKLAISNNVLSNDGXXXXXXXXXXXXXXXXXXXXXSKIVTKHHGRDILKKSQ 383
           E  ER RLKKLA SN++LS                        S  V KHHG+DI+KKSQ
Sbjct: 19  EIAERKRLKKLAFSNHILSET------------QARPQAYLSPSATVLKHHGKDIVKKSQ 66

Query: 382 RKNKFLLSFPGLLAPVSGGKIGELKDLGTKNPILYLEFPQGKMKLFGTIVFPKNRYLTMQ 203
           RKN+FL SF GLLAPVSGGKIGELKDL TKNPILYL+FPQG+MKLFGTI++PKNRYLT+Q
Sbjct: 67  RKNRFLFSFSGLLAPVSGGKIGELKDLSTKNPILYLDFPQGRMKLFGTIMYPKNRYLTLQ 126

Query: 202 FSRGGKNVMCEDNIDTMIVFSEAWWIGNKDENPEEVRLEFPKEMNMVQHTDYDFKGGAG 26
           FSRGGKNV CED  D MIVFS+AWWIG KDENPEE  L+FPK++ M Q  +YDF GGAG
Sbjct: 127 FSRGGKNVTCEDCFDNMIVFSDAWWIGTKDENPEEACLDFPKDLTMGQCGEYDFNGGAG 185


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