BLASTX nr result

ID: Bupleurum21_contig00023331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023331
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF88020.1| contains similarity to other Arabidopsis thaliana...    83   3e-14
gb|AAD28051.1| En/Spm-like transposon protein [Arabidopsis thali...    72   4e-11
emb|CAN60143.1| hypothetical protein VITISV_036345 [Vitis vinifera]    65   4e-09
emb|CAN83740.1| hypothetical protein VITISV_019109 [Vitis vinifera]    63   3e-08
ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    61   1e-07

>gb|AAF88020.1| contains similarity to other Arabidopsis thaliana putative
           transposon proteins [Arabidopsis thaliana]
          Length = 782

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
 Frame = -1

Query: 468 ARNKGIKQMVRWNDMGQPIGKESLALAHFIGSYVRRHVPITCDNWRKKDLLTIKDALWDE 289
           A++   +  V +  MG+PIGK S  LA + G+ VR HVPIT D W K     I+  LW  
Sbjct: 201 AKDPNARVRVEYTMMGEPIGKGSFKLASYAGALVREHVPITIDRWTKIG-EEIRTLLWKS 259

Query: 288 IKIENKMKAGEKNPV-VTRLDAWEYARRNADGVIDDPVALQVLEDVIEISKQVAEHELTN 112
           ++     K G  +P  VTRL  W  +R   DG   +  A + ++  +EI     +   TN
Sbjct: 260 VQ-----KTGSADPTEVTRLKVWVKSRTKKDGTPVNTNAAEKIKKAVEIVSSGPQSNGTN 314

Query: 111 IGTDDLLSRLIPLEYPGRVRAFGWGVTKTSL 19
              D  LS+L+  + PGR+RA G  + KT L
Sbjct: 315 EAKDS-LSQLLGPDNPGRLRAMGRNMNKTKL 344


>gb|AAD28051.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 476

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
 Frame = -1

Query: 468 ARNKGIKQMVRWNDMGQPIGKESLALAHFIGSYVRRHVPITCDNWRK--KDLLTIKDALW 295
           A++   +  V + +MG+PI K S+ LA ++G+ VR HVP+T + W K  ++L T+   LW
Sbjct: 318 AKDPNTRVKVEFTNMGEPIRKGSVKLASYVGALVREHVPVTIERWTKIGEELRTV---LW 374

Query: 294 DEIKIENKMKAGEKNP-VVTRLDAWEYARRNADGV-IDDPVALQVLEDVIEISKQVAEHE 121
             ++     K    +P  VTRL  W  +R   DG  ++   A +++++++      +++ 
Sbjct: 375 KSVQ-----KTASADPSEVTRLKVWVKSRTKKDGTPVNTNAAEKIVKEIVN-----SDNP 424

Query: 120 LTNIGTDDLLSRLIPLEYPGRVRAFGWGVTKTSL 19
            TN   D  LS+L+  + PGR+RA G  + K  L
Sbjct: 425 STNEAPDS-LSQLLGPDNPGRLRAMGRNMNKIKL 457


>emb|CAN60143.1| hypothetical protein VITISV_036345 [Vitis vinifera]
          Length = 853

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
 Frame = -1

Query: 471 KARNKGIKQMVRWNDMGQPIGKESLALAHFIGSYVRRHVPITCDNWRKKDLLTIKDALWD 292
           K R++G+K  +++ND G+ +G+  + L   +G   R  VPI   +WR   L+ +K+ LWD
Sbjct: 478 KKRSEGVKIDIQYNDDGEGVGEGYVQLVSXLGVLARTMVPIYHTDWRVV-LVELKEKLWD 536

Query: 291 EIKIENKMKAGEKNPVVTRLDAWEYARRNADGVIDDPVALQVLEDVIEISKQVAEHELTN 112
            IK++   K G + P + R   W+  R        D V   + E + E++K V E  +T 
Sbjct: 537 CIKMQ---KTGSRKP-IDRWVLWKLXRLKKCEY--DDVTRPIAEKIDELAKAVEEGNITC 590

Query: 111 IGTDDLLS-RLIPLEYPGRVR 52
           +G  D+L+  L   E+P RVR
Sbjct: 591 VGQKDILTLALGTSEHPRRVR 611


>emb|CAN83740.1| hypothetical protein VITISV_019109 [Vitis vinifera]
          Length = 667

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/112 (32%), Positives = 65/112 (58%)
 Frame = -1

Query: 471 KARNKGIKQMVRWNDMGQPIGKESLALAHFIGSYVRRHVPITCDNWRKKDLLTIKDALWD 292
           K R+KGIK  + +N +G  IG+ S+ L+ ++G+  R HVPI  ++WRK    T K+ LWD
Sbjct: 209 KNRSKGIKXKIEYNSLGSHIGENSVELSSYLGTITRTHVPIIVESWRKVPKET-KEKLWD 267

Query: 291 EIKIENKMKAGEKNPVVTRLDAWEYARRNADGVIDDPVALQVLEDVIEISKQ 136
            I ++ +   G  +  V    A E  ++     I +PV + ++++++E +K+
Sbjct: 268 LITLQAEGSIGRVDRSVLXKKARE--KKGKFNKITEPV-INMIDELLENAKE 316


>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 26/161 (16%)
 Frame = -1

Query: 435  WNDMGQPIGKESLALAHFIGSYVRRHVPITCDNWRKKDLLTIKDALWDEIKIEN-KMKAG 259
            +N+ GQPIG+ S+ L+ F+G+ VR  VP+T ++WRK    + K+ LW  ++ ++ K K+ 
Sbjct: 791  FNEFGQPIGEASIGLSSFLGALVREVVPVTLNDWRKLSTRS-KEVLWKSVQAKSEKFKSM 849

Query: 258  EKNPV-------------------------VTRLDAWEYARRNADGVIDDPVALQVLEDV 154
            +K  +                         V+R+  W  A R  DG   +    + LE +
Sbjct: 850  KKKQLPHTCSRKGYARLAEEMKKGCPDSSSVSRVAVWAKAHRKKDGNPVNSQVAEALERI 909

Query: 153  IEISKQVAEHELTNIGTDDLLSRLIPLEYPGRVRAFGWGVT 31
             +I  +  +    N+G ++ +S+++  +  G   A G+GVT
Sbjct: 910  EQIDNEGIKTTSNNVG-NEAISKVLGSD-RGDTGALGFGVT 948



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/102 (32%), Positives = 58/102 (56%)
 Frame = -1

Query: 441 VRWNDMGQPIGKESLALAHFIGSYVRRHVPITCDNWRKKDLLTIKDALWDEIKIENKMKA 262
           + ++  GQPIG+ S+ L+ F+G+ VR  VP+T  NWRK    T K+ LW  I++    +A
Sbjct: 468 ITFDQFGQPIGEASIGLSSFLGALVREVVPVTLSNWRKLS-TTSKEILWTSIQMGRLWRA 526

Query: 261 GEKNPVVTRLDAWEYARRNADGVIDDPVALQVLEDVIEISKQ 136
           G K+ +V+++ +      N + V   P  +Q + D ++  K+
Sbjct: 527 G-KSRIVSQIQS---TSTNEELVKMKPSNVQSMHDWMDFVKE 564


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