BLASTX nr result

ID: Bupleurum21_contig00023325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023325
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   106   2e-21
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   100   2e-19
ref|YP_001680917.1| hypothetical protein HM1_3148 [Heliobacteriu...    76   2e-13
ref|ZP_02038208.1| hypothetical protein BACCAP_03832 [Bacteroide...    80   2e-13
ref|ZP_16915483.1| hypothetical protein HMPREF9520_02283 [Entero...    76   2e-13

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/68 (77%), Positives = 54/68 (79%)
 Frame = -1

Query: 383  PVNSFEFRSCDRTPQAECFTR*LGP*SA*TKGEHSSFTAWTTRVSNPVRSPCFRTPASVG 204
            PVNSFEFRSCDRTP+              TKGEHSSFTAWTTRVSNPVRSPCFRTPASVG
Sbjct: 874  PVNSFEFRSCDRTPE--------------TKGEHSSFTAWTTRVSNPVRSPCFRTPASVG 919

Query: 203  TQRAAFAF 180
            TQRAAFAF
Sbjct: 920  TQRAAFAF 927


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/70 (72%), Positives = 53/70 (75%)
 Frame = +1

Query: 172 GRPKAKAALWVPTDAGVRKHGERTGLETLVVHAVNDECSPLVYADQGPS*RVKHSAWGVR 351
           G PKAKAALWVPTDAGVRKH ERTGL+TLVVHAVNDECSPLVY DQGP            
Sbjct: 240 GTPKAKAALWVPTDAGVRKHRERTGLDTLVVHAVNDECSPLVYVDQGP------------ 287

Query: 352 SQDRNSKELT 381
             +RNSKELT
Sbjct: 288 --NRNSKELT 295


>ref|YP_001680917.1| hypothetical protein HM1_3148 [Heliobacterium modesticaldum Ice1]
           gi|167593158|gb|ABZ84906.1| hypothetical protein
           HM1_3148 [Heliobacterium modesticaldum Ice1]
          Length = 113

 Score = 75.9 bits (185), Expect(2) = 2e-13
 Identities = 43/72 (59%), Positives = 47/72 (65%)
 Frame = -2

Query: 295 PRANTHRLRHGLPGSLIPFAPHAFAPQRR*GPRELPSLLAFLRRSPDFTPTHEIPLSSVS 116
           P  +THRLR GLPG LI FAPHAFAPQR+   R+ PS L FL  S  FT T  IPLSS S
Sbjct: 23  PTPSTHRLRRGLPGYLILFAPHAFAPQRQVMSRQSPSPLGFLPISTHFTATPGIPLSSPS 82

Query: 115 LK*IGFESIPPV 80
           LK   F+  P V
Sbjct: 83  LKTSSFQGRPGV 94



 Score = 24.6 bits (52), Expect(2) = 2e-13
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 357 LRPYSPGGVFHALAGPL 307
           +RPYSPGGV   L   L
Sbjct: 1   MRPYSPGGVLIVLTAAL 17


>ref|ZP_02038208.1| hypothetical protein BACCAP_03832 [Bacteroides capillosus ATCC
           29799] gi|154500791|ref|ZP_02038829.1| hypothetical
           protein BACCAP_04474 [Bacteroides capillosus ATCC 29799]
           gi|150270408|gb|EDM97731.1| hypothetical protein
           BACCAP_04474 [Pseudoflavonifractor capillosus ATCC
           29799] gi|150271077|gb|EDM98346.1| hypothetical protein
           BACCAP_03832 [Pseudoflavonifractor capillosus ATCC
           29799]
          Length = 117

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/98 (50%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = -2

Query: 370 LSFGLATVLPRRSVSRVSWAPDP-RRPRANTHRLRHGLPGSLIPFAPHAFAPQRR*GPRE 194
           +SF LA VLPR     V+   +    P  + HRLR GLPG LI FAPHAFAPQR+     
Sbjct: 1   MSFNLAIVLPRWDTYCVNCGTEGVSPPTPSIHRLRRGLPGYLILFAPHAFAPQRQLLSSN 60

Query: 193 LPSLLAFLRRSPDFTPTHEIPLSSVSLK*IGFESIPPV 80
            PS L FLR S  FT TH IP++S +LK   F+  P V
Sbjct: 61  PPSPLVFLRISTHFTATHGIPIASPALKNYSFKCRPQV 98


>ref|ZP_16915483.1| hypothetical protein HMPREF9520_02283 [Enterococcus faecalis
           TX1467] gi|329572628|gb|EGG54264.1| hypothetical protein
           HMPREF9520_02283 [Enterococcus faecalis TX1467]
          Length = 89

 Score = 75.9 bits (185), Expect(2) = 2e-13
 Identities = 41/67 (61%), Positives = 45/67 (67%)
 Frame = -2

Query: 295 PRANTHRLRHGLPGSLIPFAPHAFAPQRR*GPRELPSLLAFLRRSPDFTPTHEIPLSSVS 116
           P  +THRLR GLPG LI FAPHAF PQR+   RE PS L FL  S  FT TH IPLSS +
Sbjct: 23  PTLSTHRLRRGLPGYLILFAPHAFEPQRQLQTREPPSPLVFLHISTHFTATHGIPLSSSA 82

Query: 115 LK*IGFE 95
           LK   F+
Sbjct: 83  LKSPSFQ 89



 Score = 24.6 bits (52), Expect(2) = 2e-13
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 357 LRPYSPGGVFHALAGPL 307
           +R YSPGGV +A A  L
Sbjct: 1   MRSYSPGGVLNAFAAAL 17


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