BLASTX nr result

ID: Bupleurum21_contig00023323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023323
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522982.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...    85   7e-15
ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...    85   7e-15
ref|XP_002528998.1| DNA binding protein, putative [Ricinus commu...    84   9e-15
emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]    83   3e-14
ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...    82   5e-14

>ref|XP_003522982.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 484

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/72 (56%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = +2

Query: 5   AQSQLKKEETDLEKSISDI-SVQMEEFQNKIIHFEKFDLEVEKESQQVEQLKNLLFADQL 181
           A  QL+KEE D+EK+IS+I  VQM+  Q+K++HFE  DL +EKE QQ+EQ+KN+ F DQL
Sbjct: 411 ANIQLEKEELDVEKAISEIIEVQMKNIQDKLVHFEDLDLLMEKEGQQMEQMKNMFFLDQL 470

Query: 182 ALLFHKTAGAKS 217
            LLFHK++  K+
Sbjct: 471 TLLFHKSSAPKT 482


>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
           gi|297745602|emb|CBI40767.3| unnamed protein product
           [Vitis vinifera]
          Length = 492

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/84 (52%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   EAQSQLKKEETDLEKSISDIS-VQMEEFQNKIIHFEKFDLEVEKESQQVEQLKNLLFADQ 178
           +A+S L++EE D+E++IS I+ VQM+E ++KI+HFE+F+L +EKE QQ++Q+KNLLF DQ
Sbjct: 408 DAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKNLLFVDQ 467

Query: 179 LALLFHKTAGAKSHAVSEEIKGQN 250
           L LLF K A  K+    E + G+N
Sbjct: 468 LTLLFQKAAAPKT---GELMGGEN 488


>ref|XP_002528998.1| DNA binding protein, putative [Ricinus communis]
           gi|223531538|gb|EEF33368.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 482

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/79 (56%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   EAQSQLKKEETDLEKSISD-ISVQMEEFQNKIIHFEKFDLEVEKESQQVEQLKNLLFADQ 178
           +A S L+KEE D E++IS  + VQ++E Q+KII FEK DL +EKE QQ+EQ+KNLLF DQ
Sbjct: 399 DANSLLEKEELDAERAISRLVEVQLKEIQDKIIRFEKLDLLMEKEWQQLEQVKNLLFVDQ 458

Query: 179 LALLFHKTAGAKSHAVSEE 235
           L LLFHK +  K+    EE
Sbjct: 459 LTLLFHKKSAPKTEEHVEE 477


>emb|CAN64878.1| hypothetical protein VITISV_030794 [Vitis vinifera]
          Length = 422

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/84 (51%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   EAQSQLKKEETDLEKSISDIS-VQMEEFQNKIIHFEKFDLEVEKESQQVEQLKNLLFADQ 178
           +A+S L++EE D+E++IS I+ VQM+E ++KI+HFE+F+L +EKE QQ++Q+K LLF DQ
Sbjct: 338 DAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEXQQLQQMKXLLFVDQ 397

Query: 179 LALLFHKTAGAKSHAVSEEIKGQN 250
           L LLF K A  K+    E + G+N
Sbjct: 398 LTLLFQKAAAPKT---GELMGGEN 418


>ref|XP_003527631.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Glycine max]
          Length = 491

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = +2

Query: 5   AQSQLKKEETDLEKSISDI-SVQMEEFQNKIIHFEKFDLEVEKESQQVEQLKNLLFADQL 181
           A  QL+KEE D+EK+IS+I  VQM+  Q+K++ FE  DL +EKE QQ+EQ+KN+ F DQL
Sbjct: 405 ANIQLEKEELDVEKAISEIIEVQMKNIQDKLVQFEDLDLLMEKEGQQLEQMKNMFFLDQL 464

Query: 182 ALLFHKTAGAKSHAVSE 232
            LLFHK++  K+    E
Sbjct: 465 TLLFHKSSAPKTGECQE 481


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