BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023320
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypep...   294   5e-78
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su...   293   9e-78
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]    293   1e-77
ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 ...   291   3e-77
ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II su...   291   4e-77

>ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223540340|gb|EEF41911.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  294 bits (753), Expect = 5e-78
 Identities = 144/151 (95%), Positives = 149/151 (98%)
 Frame = +3

Query: 87  MFFHIVLERNMQLHPRHFGRDLRQKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 266
           MFFHIVLERNMQLHPR+FGR+LR+ LVSKLMKDVEGTCSGRHGF+VAITGIESVGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60

Query: 267 DGTGFVTFPVKYLCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 446
           DGTGFVTFPVKY CVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 447 SGDMPNYTTSDGSVKIQKESEVRLKIIGTRV 539
           SGDMPNYTTSDGSVKIQK+SEVRLKIIGTRV
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRV 151


>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
           [Cucumis sativus] gi|449518487|ref|XP_004166273.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB7-like [Cucumis sativus]
          Length = 176

 Score =  293 bits (751), Expect = 9e-78
 Identities = 142/151 (94%), Positives = 149/151 (98%)
 Frame = +3

Query: 87  MFFHIVLERNMQLHPRHFGRDLRQKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 266
           MFFHIVLERNMQLHPRHFGR+LR+ LVSKLMKDVEGTCSGRHGF+VAITGIE++GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60

Query: 267 DGTGFVTFPVKYLCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 446
           DGTGFVTFPVKY CVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 447 SGDMPNYTTSDGSVKIQKESEVRLKIIGTRV 539
           SGD+PNYTTSDGSVKIQK+SEVRLKIIGTRV
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRV 151


>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  293 bits (750), Expect = 1e-77
 Identities = 142/155 (91%), Positives = 149/155 (96%)
 Frame = +3

Query: 75  EKERMFFHIVLERNMQLHPRHFGRDLRQKLVSKLMKDVEGTCSGRHGFIVAITGIESVGK 254
           E+E MFFHIVLERNMQLHPRHFG  LR KLV+KLMKDVEGTCSGRHGF+VAITG+E +GK
Sbjct: 56  EEEEMFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGK 115

Query: 255 GLIRDGTGFVTFPVKYLCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 434
           GLIR+GTGFVTFPVKY CVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD
Sbjct: 116 GLIREGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 175

Query: 435 MEFQSGDMPNYTTSDGSVKIQKESEVRLKIIGTRV 539
           MEFQSGD+PNYTTSDGSVKIQKESEVRLKIIGTRV
Sbjct: 176 MEFQSGDVPNYTTSDGSVKIQKESEVRLKIIGTRV 210


>ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 [Glycine max]
           gi|356512183|ref|XP_003524800.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7-like [Glycine max]
           gi|1173137|sp|P46279.1|RPB7_SOYBN RecName:
           Full=DNA-directed RNA polymerase II subunit RPB7;
           Short=RNA polymerase II subunit B7
           gi|170052|gb|AAA34005.1| RNA polymerase II [Glycine max]
           gi|255626843|gb|ACU13766.1| unknown [Glycine max]
          Length = 176

 Score =  291 bits (746), Expect = 3e-77
 Identities = 141/151 (93%), Positives = 148/151 (98%)
 Frame = +3

Query: 87  MFFHIVLERNMQLHPRHFGRDLRQKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 266
           MFFHIVLERNMQLHPR+FGR+LR  LVSKLMKDVEGTCSGRHGF+VA+TGIE++GKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60

Query: 267 DGTGFVTFPVKYLCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 446
           DGTGFVTFPVKY CVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 447 SGDMPNYTTSDGSVKIQKESEVRLKIIGTRV 539
           SGDMPNYTTSDGSVKIQK+SEVRLKIIGTRV
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRV 151


>ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
           vinifera] gi|147841138|emb|CAN75204.1| hypothetical
           protein VITISV_042914 [Vitis vinifera]
           gi|297745997|emb|CBI16053.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  291 bits (745), Expect = 4e-77
 Identities = 142/151 (94%), Positives = 147/151 (97%)
 Frame = +3

Query: 87  MFFHIVLERNMQLHPRHFGRDLRQKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 266
           MFFHIVLERNMQLHPRHFGR LR  LV+KL+KDVEGTCSGRHGF+VAITGIE+VGKGLIR
Sbjct: 1   MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60

Query: 267 DGTGFVTFPVKYLCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 446
           DGTGFVTFPVKY CVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61  DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120

Query: 447 SGDMPNYTTSDGSVKIQKESEVRLKIIGTRV 539
           SGDMPNYTTSDGSVKIQK+SEVRLKIIGTRV
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRV 151