BLASTX nr result

ID: Bupleurum21_contig00023310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023310
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82914.1| hypothetical protein VITISV_031085 [Vitis vinifera]    47   3e-09
ref|XP_002514549.1| hypothetical protein RCOM_1465130 [Ricinus c...    62   2e-07
emb|CBI27434.3| unnamed protein product [Vitis vinifera]               60   7e-07
ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...    41   2e-06
dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]                 41   2e-06

>emb|CAN82914.1| hypothetical protein VITISV_031085 [Vitis vinifera]
          Length = 341

 Score = 47.4 bits (111), Expect(2) = 3e-09
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -1

Query: 390 AVDRISILPRNLIDLIVERLPVHDAARTSVLS 295
           A DRIS LP N+ID I+ RLP+HDA RTS+LS
Sbjct: 7   AADRISXLPSNIIDBILVRLPIHDAVRTSILS 38



 Score = 40.0 bits (92), Expect(2) = 3e-09
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = -2

Query: 200 QLVFDEKFISKLVPRDNIHTQLLTVTKTINSILLLHSGPILKFHLSIPKDLPLHQCEDVD 21
           QLVF++ F  ++     + ++   +   +   LLLH GPI+KF L++P+      C  VD
Sbjct: 50  QLVFEDSFSEQMTKELGVLSEEKLLA-AVYQALLLHKGPIVKFSLAVPE---FESCSSVD 105

Query: 20  IWI 12
            WI
Sbjct: 106 HWI 108


>ref|XP_002514549.1| hypothetical protein RCOM_1465130 [Ricinus communis]
           gi|223546153|gb|EEF47655.1| hypothetical protein
           RCOM_1465130 [Ricinus communis]
          Length = 272

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/116 (33%), Positives = 69/116 (59%)
 Frame = -2

Query: 788 LCLIQSSPNLRYLEIQVDSEEDYFSNVEEVEQYLLLPDVSRMLAGQLETVKIEDMMGSKV 609
           LCLI+SSP+L+ LEI VD   +   N +   ++L + + S +   +++ V++ D+ G  +
Sbjct: 155 LCLIKSSPHLQKLEISVDECPNI--NSDGAVEFLAVQNRSDISLDKVQEVEMLDLTGRGL 212

Query: 608 ELQFVKLLLASTPLLRWMELEYRLSYEDPEEELRISQELLQFPRASTAASVMWSSV 441
           ++ FVKLLLA +P+L  M + + L      EELR+  E+ +F   S  A +++S +
Sbjct: 213 QMGFVKLLLAKSPMLERMHV-HPLQGISTNEELRLLTEITRFCWPSAVAEIIYSGL 267


>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
 Frame = -2

Query: 788 LCLIQSSPNLRYLEIQVDSEEDYFSNV--EEVEQYLLLPDVSRMLAGQLETVKIEDMMGS 615
           LCLI SSPNL  L +       Y  ++  + V +Y    ++S     +L+ VK+E++   
Sbjct: 342 LCLITSSPNLEELRVVA-----YAGDIARDAVVEYFGTQNLSHHSLKRLQKVKMEEISNF 396

Query: 614 KVELQFVKLLLASTPLLRWMELEYRLSYEDP--EEELRISQELLQFPRASTAASVMW 450
           + EL+F+K +LAS+P L  ME+   L  ED   E+E ++ +EL++F RAS  A V++
Sbjct: 397 EPELEFIKFILASSPSLEEMEV---LRSEDTVGEDERKMWKELMRFRRASPKAEVIY 450


>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
           thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g13570
           gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
           [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
           At1g13570 [Arabidopsis thaliana]
           gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
           containing protein [Arabidopsis thaliana]
          Length = 416

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -2

Query: 197 LVFDEKFISKLVPRDNIHTQLLTVTKTINSILLLHSGPILKFHLSIPKDLPLHQCE-DVD 21
           LVFDEK +S    R  + T L+   + I  +LLLH GPI KF LS        QC  D+D
Sbjct: 48  LVFDEKCVSPSNDRCVVETNLV---RFITGVLLLHQGPIHKFQLS----TSFKQCRPDID 100

Query: 20  IWI 12
            W+
Sbjct: 101 QWL 103



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -1

Query: 399 LGSAVDRISILPRNLIDLIVERLPVHDAARTSVLS 295
           +G + D IS LP+++I+ I+ RL + DA RTSVLS
Sbjct: 1   MGESPDFISDLPQSIIENILTRLSIRDAIRTSVLS 35


>dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = -2

Query: 197 LVFDEKFISKLVPRDNIHTQLLTVTKTINSILLLHSGPILKFHLSIPKDLPLHQCE-DVD 21
           LVFDEK +S    R  + T L+   + I  +LLLH GPI KF LS        QC  D+D
Sbjct: 48  LVFDEKCVSPSNDRCVVETNLV---RFITGVLLLHQGPIHKFQLS----TSFKQCRPDID 100

Query: 20  IWI 12
            W+
Sbjct: 101 QWL 103



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -1

Query: 399 LGSAVDRISILPRNLIDLIVERLPVHDAARTSVLS 295
           +G + D IS LP+++I+ I+ RL + DA RTSVLS
Sbjct: 1   MGESPDFISDLPQSIIENILTRLSIRDAIRTSVLS 35


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