BLASTX nr result

ID: Bupleurum21_contig00023298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023298
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]    87   1e-15
ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...    87   1e-15
emb|CBI37340.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...    76   2e-12
ref|XP_003551409.1| PREDICTED: uncharacterized protein LOC100819...    74   1e-11

>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score = 87.4 bits (215), Expect(2) = 1e-15
 Identities = 43/72 (59%), Positives = 52/72 (72%)
 Frame = +2

Query: 2    SQGISPFGGLNSSFSNQTTTPSVPSYPLHHPQLHPMSSQQSHVLTNAHHPHLQGPNVVSN 181
            SQG+  F G+ S+FSNQT  P  P YP+H  Q H MSSQQSHVL N HHPHLQGPN  ++
Sbjct: 1506 SQGVPAFNGMGSAFSNQTVPPVQP-YPIHSQQQHQMSSQQSHVLGNPHHPHLQGPNHTTS 1564

Query: 182  SQYQAYVIRLPK 217
            +Q QAY +R+ K
Sbjct: 1565 TQ-QAYAMRVAK 1575



 Score = 20.4 bits (41), Expect(2) = 1e-15
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 211  AKEKQIQQQRLFQ 249
            AKE+Q+QQ+ L Q
Sbjct: 1574 AKERQLQQRMLHQ 1586


>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/72 (59%), Positives = 52/72 (72%)
 Frame = +2

Query: 2    SQGISPFGGLNSSFSNQTTTPSVPSYPLHHPQLHPMSSQQSHVLTNAHHPHLQGPNVVSN 181
            SQG+  F G+ S+FSNQT  P  P YP+H  Q H MSSQQSHVL N HHPHLQGPN  ++
Sbjct: 1490 SQGVPAFNGMGSAFSNQTVPPVQP-YPIHSQQQHQMSSQQSHVLGNPHHPHLQGPNHTTS 1548

Query: 182  SQYQAYVIRLPK 217
            +Q QAY +R+ K
Sbjct: 1549 TQ-QAYAMRVAK 1559


>emb|CBI37340.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/72 (59%), Positives = 52/72 (72%)
 Frame = +2

Query: 2    SQGISPFGGLNSSFSNQTTTPSVPSYPLHHPQLHPMSSQQSHVLTNAHHPHLQGPNVVSN 181
            SQG+  F G+ S+FSNQT  P  P YP+H  Q H MSSQQSHVL N HHPHLQGPN  ++
Sbjct: 1415 SQGVPAFNGMGSAFSNQTVPPVQP-YPIHSQQQHQMSSQQSHVLGNPHHPHLQGPNHTTS 1473

Query: 182  SQYQAYVIRLPK 217
            +Q QAY +R+ K
Sbjct: 1474 TQ-QAYAMRVAK 1484


>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
            gi|223539654|gb|EEF41236.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2009

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = +2

Query: 2    SQGISPFGGLNSSFSNQTTTPSVPSYPLHHPQLHPMSSQQSHVLTNAHHPHLQGPNVVSN 181
            SQGI  F GL S+F+NQT+ P+V +YP H  Q H +  QQSHV++N   PH+QG N  + 
Sbjct: 1460 SQGIPAFNGLTSAFANQTSPPAVQAYPGHPQQQHQLPPQQSHVMSN---PHIQGTNQTTG 1516

Query: 182  SQYQAYVIRLPK 217
            SQ QAY +R+ K
Sbjct: 1517 SQQQAYAMRVAK 1528


>ref|XP_003551409.1| PREDICTED: uncharacterized protein LOC100819248 [Glycine max]
          Length = 1953

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/72 (59%), Positives = 49/72 (68%)
 Frame = +2

Query: 2    SQGISPFGGLNSSFSNQTTTPSVPSYPLHHPQLHPMSSQQSHVLTNAHHPHLQGPNVVSN 181
            SQGI  F G++SSF+NQT  P V SYP H  Q H +S QQSH L+N H   LQGPN  +N
Sbjct: 1461 SQGIPAFSGMSSSFNNQTIPPPVQSYPGHAQQPHQLSQQQSH-LSNPH--SLQGPNHATN 1517

Query: 182  SQYQAYVIRLPK 217
            SQ QAY IRL K
Sbjct: 1518 SQ-QAYAIRLAK 1528


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