BLASTX nr result
ID: Bupleurum21_contig00023285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00023285
(1289 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-... 236 1e-59
ref|NP_201200.2| protein chromatin remodeling 24 [Arabidopsis th... 234 3e-59
ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arab... 234 5e-59
gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japo... 233 6e-59
ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-... 233 1e-58
>ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis sativus]
Length = 1016
Score = 236 bits (601), Expect = 1e-59
Identities = 154/445 (34%), Positives = 242/445 (54%), Gaps = 39/445 (8%)
Frame = -2
Query: 1243 KECEKLYF---SSPDGNVIFELEEELATILREYQVEGVRWLFDLHVRKEGGILADDMGLG 1073
K CE SS N F+L+ +AT+L +Q +G++WL+ LH +GGIL DDMGLG
Sbjct: 300 KSCEDFILEGKSSAGRNSTFKLQGRIATMLYPHQRDGLQWLWSLHCLGKGGILGDDMGLG 359
Query: 1072 KTKQVCAFLKGLFSTSSIKRVMILAPATLLINWKGELNTMKLSASNDISVNIYPGKASAT 893
KT Q+C FL GLF + IKRV+++AP TLL +W EL+ + LS Y G ++
Sbjct: 360 KTMQICGFLAGLFYSRLIKRVLVVAPKTLLPHWIKELSVVGLSE----KTREYYGTSAKL 415
Query: 892 KE-----IVEGSQILLVSYQ--RLNGDELYTGLFNR-------LKWDHVILDEGHLLKNP 755
++ I++ +LL +Y R N L F+ WD++ILDEGHL+KNP
Sbjct: 416 RQYELNYILQDKGVLLTTYDIVRNNSKSLQGNCFSEDEETEDGTTWDYMILDEGHLIKNP 475
Query: 754 RGIRAQNVKKIRAKAGAFIILTGTAIQNNLQELWALMNICNKNVLGTEERFRSDFDVTIQ 575
RA+++ I + II++GT +QNNL+ELWAL N C ++LG + F+ ++ I
Sbjct: 476 STQRAKSLLDI--PSAHRIIISGTPLQNNLKELWALFNFCCPDLLGDKHWFKEHYESAIL 533
Query: 574 LGNRRTLDQMTYVYAREAAKKLQKLVEPYYLRR----------EKGILELPGKDELVIWL 425
GN + + AK L++ ++PY+LRR ++ +L K+++++WL
Sbjct: 534 RGNDKKASERDKRIGSVVAKGLRERIQPYFLRRMKSEVFNEDNDQAATKLSKKNDIIVWL 593
Query: 424 KLTPLQQKLYMQFLKF-LASNAQKGIHKDRLPSIRLLENLCLHPKILTNQAKSEEFK--- 257
+LT Q++LY FLK LA +A G L ++ +L+ +C HP +LT +A E +
Sbjct: 594 RLTSCQRQLYEAFLKSDLALSAFDG---SVLAALTILKKICDHPLLLTKRAAEEVLEGME 650
Query: 256 -------TGCDRDLLKRFRALVFDEINVASGIECSVKLKFLGEMLPKIIRDGDSVLIFSN 98
G L KR +V + S K+ F+ +L ++ G S+LIFS
Sbjct: 651 TVLSPEDAGVAEKLAKRLADVVDRDFYEVYDDNVSCKISFIMSLLDNLVPKGHSILIFSQ 710
Query: 97 SCEMLTLVE-YMIKDKYGFVRIDGS 26
+ +ML+L+E ++ + Y F+RIDG+
Sbjct: 711 TRKMLSLLEKSLLSNDYEFLRIDGT 735
>ref|NP_201200.2| protein chromatin remodeling 24 [Arabidopsis thaliana]
gi|18087573|gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5
[Arabidopsis thaliana] gi|22655364|gb|AAM98274.1|
At5g63950/MBM17_5 [Arabidopsis thaliana]
gi|332010436|gb|AED97819.1| protein chromatin remodeling
24 [Arabidopsis thaliana]
Length = 1090
Score = 234 bits (598), Expect = 3e-59
Identities = 154/435 (35%), Positives = 238/435 (54%), Gaps = 34/435 (7%)
Frame = -2
Query: 1204 NVIFELEEELATILREYQVEGVRWLFDLHVRKEGGILADDMGLGKTKQVCAFLKGLFSTS 1025
N+ + L ++AT+L +Q EG+ WL+ LH + +GGIL DDMGLGKT Q+C+FL GLF +
Sbjct: 364 NLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSK 423
Query: 1024 SIKRVMILAPATLLINWKGELNTMKLSASNDISVNIYPGKASATKE-----IVEGSQILL 860
IKR +++AP TLL +W EL T+ LS Y G ++ +E I++G ILL
Sbjct: 424 LIKRALVVAPKTLLPHWMKELATVGLSQ----MTREYYGTSTKAREYDLHHILQGKGILL 479
Query: 859 VSY-------QRLNGDELYTGLFNR--LKWDHVILDEGHLLKNPRGIRAQNVKKIRAKAG 707
+Y + L GD+ YT + KWD++ILDEGHL+KNP RA+++ +I +
Sbjct: 480 TTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEI--PSS 537
Query: 706 AFIILTGTAIQNNLQELWALMNICNKNVLGTEERFRSDFDVTIQLGNRRTLDQMTYVYAR 527
II++GT IQNNL+ELWAL N +LG + F+ +++ I G +
Sbjct: 538 HRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGS 597
Query: 526 EAAKKLQKLVEPYYLRREKGIL--------ELPGKDELVIWLKLTPLQQKLYMQFLKFLA 371
AK L++ ++P++LRR K + +L KDE+V+WL+LT Q++LY FL +
Sbjct: 598 TVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLN--S 655
Query: 370 SNAQKGIHKDRLPSIRLLENLCLHPKILTNQAKSEEFKTGCDRDL-------LKRFRALV 212
L ++ +L+ +C HP +LT +A +E+ G D L +R +
Sbjct: 656 EIVLSAFDGSPLAALTILKKICDHPLLLTKRA-AEDVLEGMDSTLTQEEAGVAERLAMHI 714
Query: 211 FDEINV----ASGIECSVKLKFLGEMLPKIIRDGDSVLIFSNSCEMLTLV-EYMIKDKYG 47
D ++ S KL F+ +L +I +G VLIFS + +ML L+ + + + Y
Sbjct: 715 ADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYS 774
Query: 46 FVRIDGSASYDVREK 2
F+RIDG+ R K
Sbjct: 775 FLRIDGTTKAPDRLK 789
>ref|XP_002866584.1| hypothetical protein ARALYDRAFT_496587 [Arabidopsis lyrata subsp.
lyrata] gi|297312419|gb|EFH42843.1| hypothetical protein
ARALYDRAFT_496587 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 234 bits (596), Expect = 5e-59
Identities = 151/432 (34%), Positives = 238/432 (55%), Gaps = 34/432 (7%)
Frame = -2
Query: 1195 FELEEELATILREYQVEGVRWLFDLHVRKEGGILADDMGLGKTKQVCAFLKGLFSTSSIK 1016
+ L ++AT+L +Q +G++WL+ LH + +GGIL DDMGLGKT Q+C+FL GLF + IK
Sbjct: 374 YTLPGKIATMLYPHQRDGLKWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIK 433
Query: 1015 RVMILAPATLLINWKGELNTMKLSASNDISVNIYPGKASATKE-----IVEGSQILLVSY 851
R +++AP TLL +W EL T+ LS Y G ++ +E I++G +LL +Y
Sbjct: 434 RALVVAPKTLLPHWMKELATVGLSK----MTREYYGTSTKAREYDLHHILQGKGVLLTTY 489
Query: 850 -------QRLNGDELYTGLFNR--LKWDHVILDEGHLLKNPRGIRAQNVKKIRAKAGAFI 698
+ L GD+ YT + +KWD++ILDEGHL+KNP RA+++ +I + I
Sbjct: 490 DIVRNNTKALQGDDHYTDEDDEDGIKWDYMILDEGHLIKNPNTQRAKSLLEI--PSSHRI 547
Query: 697 ILTGTAIQNNLQELWALMNICNKNVLGTEERFRSDFDVTIQLGNRRTLDQMTYVYAREAA 518
I++GT IQNNL+ELWAL N +LG + F+ +++ I G + A
Sbjct: 548 IISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVA 607
Query: 517 KKLQKLVEPYYLRREKGIL--------ELPGKDELVIWLKLTPLQQKLYMQFLKFLASNA 362
K L++ ++P++LRR K + +L KDE+V+WL+LT Q++LY FL +
Sbjct: 608 KNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFLN--SEIV 665
Query: 361 QKGIHKDRLPSIRLLENLCLHPKILTNQAKSEEFKTGCDRDL-------LKRFRALVFDE 203
L ++ +L+ +C HP +LT +A +E+ G D L +R + D
Sbjct: 666 LSAFDGSPLAALTILKKICDHPLLLTKRA-AEDVLEGMDSTLTPEEAGVAERLAMHIADN 724
Query: 202 INV----ASGIECSVKLKFLGEMLPKIIRDGDSVLIFSNSCEMLTLV-EYMIKDKYGFVR 38
++ S KL F+ +L +I +G VLIFS + +ML L+ + + + Y F+R
Sbjct: 725 VDTDDFQTKNDSISCKLSFIMSLLDNLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLR 784
Query: 37 IDGSASYDVREK 2
IDG+ R K
Sbjct: 785 IDGTTKAPDRLK 796
>gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japonica Group]
Length = 1678
Score = 233 bits (595), Expect = 6e-59
Identities = 153/431 (35%), Positives = 234/431 (54%), Gaps = 33/431 (7%)
Frame = -2
Query: 1195 FELEEELATILREYQVEGVRWLFDLHVRKEGGILADDMGLGKTKQVCAFLKGLFSTSSIK 1016
+ L + +L +Q EG+RWL+ LH R GGIL DDMGLGKT QV AFL GLF + IK
Sbjct: 270 YNLPGRIFNMLYPHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLFHSRLIK 329
Query: 1015 RVMILAPATLLINWKGELNTMKLSAS-NDISVNIYPGKASATKEIVEGSQILLVSYQRL- 842
RV+++AP TLL +W EL+ + L D S + K + ILL +Y +
Sbjct: 330 RVLVVAPKTLLTHWTKELSVVSLKDKIRDYSGPNANARNYELKYAFKEGGILLTTYDIVR 389
Query: 841 NGDELYTGLF-------NRLKWDHVILDEGHLLKNPRGIRAQNVKKIRAKAGAFIILTGT 683
N ++ G F W++VILDEGH++KNP+ RAQ++ +I I+++GT
Sbjct: 390 NNFKMIKGNFTNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFEI--PCAHRIVISGT 447
Query: 682 AIQNNLQELWALMNICNKNVLGTEERFRSDFDVTIQLGNRRTLDQMTYVYAREAAKKLQK 503
IQNNL+E+WAL C VLG +E+F++ ++ I GN + AK+L++
Sbjct: 448 PIQNNLKEMWALFYFCCPEVLGDKEQFKARYEHAIIQGNDKNATNRQKHIGSNVAKELRE 507
Query: 502 LVEPYYLRREKGIL----------ELPGKDELVIWLKLTPLQQKLYMQFLKFLASNAQKG 353
++PY+LRR K + +L K+EL+IWLKLT Q++LY FL +
Sbjct: 508 RIKPYFLRRMKNEVFLDSGTGEDKKLAKKNELIIWLKLTSCQRQLYEAFLN--SELVHSS 565
Query: 352 IHKDRLPSIRLLENLCLHPKILTNQAKSEEFKTGCDRDLLKRFRALV------------- 212
+ L +I +L+ +C HP +LT +A +E G D L + +V
Sbjct: 566 MQGSPLAAITILKKICDHPLLLTKKA-AEGVLEGMDAMLNNQEMGMVEKMAMNLADMAHD 624
Query: 211 FDEINVASGIECSVKLKFLGEMLPKIIRDGDSVLIFSNSCEMLTLV-EYMIKDKYGFVRI 35
D++ + G + S KL F+ +L ++ +G +VLIFS + +ML ++ E +I + Y F+RI
Sbjct: 625 DDDVELQVGQDVSCKLSFMMSLLQNLVSEGHNVLIFSQTRKMLNIIQEAIILEGYKFLRI 684
Query: 34 DGSASYDVREK 2
DG+ RE+
Sbjct: 685 DGTTKISERER 695
>ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
distachyon]
Length = 999
Score = 233 bits (593), Expect = 1e-58
Identities = 155/435 (35%), Positives = 237/435 (54%), Gaps = 37/435 (8%)
Frame = -2
Query: 1195 FELEEELATILREYQVEGVRWLFDLHVRKEGGILADDMGLGKTKQVCAFLKGLFSTSSIK 1016
++L + +L +Q EG+RWL+ LH R GGIL DDMGLGKT QV AFL GLF + I+
Sbjct: 279 YKLPGRIFKMLYPHQREGLRWLWVLHCRGTGGILGDDMGLGKTMQVSAFLAGLFHSRLIR 338
Query: 1015 RVMILAPATLLINWKGELNTM----KLSASNDISVNIYPGKASATKEIVEGSQILLVSYQ 848
RV+++AP TLL +W EL+ + K+ + SVNI + S + ILL +Y
Sbjct: 339 RVLVVAPKTLLTHWMKELSVVGLKEKIRDYSGPSVNI---RNSELQYAFRVGGILLTTYD 395
Query: 847 RL-NGDELYTGLF---------NRLKWDHVILDEGHLLKNPRGIRAQNVKKIRAKAGAFI 698
+ N +L G F RL WD+VILDEGH++KNP+ RAQ++ +I I
Sbjct: 396 IVRNNYKLMRGDFYNDADDEEEGRL-WDYVILDEGHIIKNPKTQRAQSLLQIPCVHR--I 452
Query: 697 ILTGTAIQNNLQELWALMNICNKNVLGTEERFRSDFDVTIQLGNRRTLDQMTYVYAREAA 518
+++GT IQNNL+E+WAL C +LG ++ F++ +++ I GN ++ A
Sbjct: 453 VISGTPIQNNLKEMWALFFFCCPEILGDKDEFKTRYELPILRGNDKSATNREKHIGSNVA 512
Query: 517 KKLQKLVEPYYLRREKGIL----------ELPGKDELVIWLKLTPLQQKLYMQFLKFLAS 368
K+L++ ++PY+LRR K + +L K+EL+IWLKLT Q++LY FL +
Sbjct: 513 KELRERIKPYFLRRMKSEVFLDTGSTDDKKLSKKNELIIWLKLTACQRQLYEAFLN--SE 570
Query: 367 NAQKGIHKDRLPSIRLLENLCLHPKILTNQAKS------------EEFKTGCDRDLLKRF 224
+ L +I +L+ +C HP ILT +A + G + K
Sbjct: 571 LVHSSMQGSPLAAITILKKICDHPLILTKRAAEGILEGMEGMDGLNNQEIGMVEKMAKNL 630
Query: 223 RALVFDEINVASGIECSVKLKFLGEMLPKIIRDGDSVLIFSNSCEMLTLV-EYMIKDKYG 47
+ D+ + E S KL F+ +L K++ +G VLIFS + +ML L+ E ++ + Y
Sbjct: 631 ADMAHDDDALQVDQEVSCKLSFIMSLLRKLLEEGHHVLIFSQTRKMLNLIQEAILLEGYK 690
Query: 46 FVRIDGSASYDVREK 2
F+RIDG+ RE+
Sbjct: 691 FLRIDGTTKISERER 705