BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023281
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    95   7e-18
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    92   6e-17
gb|ABA94593.2| retrotransposon protein, putative, unclassified [...    89   4e-16
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    88   6e-16
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    87   1e-15

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
 Frame = -3

Query: 390 NEVDNSTSWKKIWSVSVPSKVKIFLWRALSNCLPTKCNLQTRRVQVDAVCPLCGSERETV 211
           ++VD++  W ++W V+ P K+  F WRA  NCLPT+  L  R V     CP+C SE ET 
Sbjct: 500 SDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETT 559

Query: 210 DHCFIQCLFARTCWSLVCPEFMYDSTVNFNTWFEQVWNQLRDKA-ELISTICWGIWKARN 34
            H  ++C+ AR  W       +  +  +F  W   ++             +CWG+W  RN
Sbjct: 560 LHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRN 619

Query: 33  DIVWN 19
           D+VWN
Sbjct: 620 DVVWN 624


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
 Frame = -3

Query: 366 WKKIWSVSVPSKVKIFLWRALSNCLPTKCNLQTRRVQVDAVCPLCGSERETVDHCFIQCL 187
           W K W + +P+KV+  +W+  SNC+ T  NL+ R V +D +C  C  E ET+ H    C 
Sbjct: 428 WNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCS 487

Query: 186 FARTCWSLVCPEFMYDSTVNFNTWFEQVW-NQLRDKAELISTICWGIWKARNDIVWNDQ 13
            AR CW L+   F + +     +W +  + +   D    ++ +C  +W  RN  VWN Q
Sbjct: 488 MARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQ 546


>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1469

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = -3

Query: 387  EVDNSTSWKKIWSVSVPSKVKIFLWRALSNCLPTKCNLQTRRVQVDAVCPLCGSERETVD 208
            EV  + SWK+IW+ +VP KV+IF W+A+SN LPT  N + R +++ + C +CG+E E V 
Sbjct: 1184 EVLVNKSWKRIWACNVPQKVRIFAWKAISNSLPTMKNKKKRNLELLSTCCICGAEEEDVA 1243

Query: 207  HCFIQCLFARTCWSLVCPEFMYDSTVNFNTWFEQVW--NQLRDKAELISTICWGIWKARN 34
            H    C  AR  WS +         VN + W    W  N L D   L+  + W IW  RN
Sbjct: 1244 HALCHCQQARNLWSAMYSARAISHDVN-SAWSGTDWILNLLEDAMFLM--LMWRIWHNRN 1300

Query: 33   DI 28
            +I
Sbjct: 1301 EI 1302


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
 Frame = -3

Query: 390 NEVDNSTSWKKIWSVSVPSKVKIFLWRALSNCLPTKCNLQTRRVQVDAVCPLCGSERETV 211
           NEV   T +  IW  + P K+K F WR+  N LPT  NL+ RR+  D  C  CG   E V
Sbjct: 490 NEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDV 549

Query: 210 DHCFIQCLFARTCWS----LVCP-EFMYDSTVNFNTWFEQVWNQ-LRDKAELISTICWGI 49
           +H   QC  ++  W      +CP + +  ++ N N    Q  NQ  R    L   I W I
Sbjct: 550 NHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQSARKDVSLFPFIGWRI 609

Query: 48  WKARNDIVWNDQQ 10
           WK RND+++N+++
Sbjct: 610 WKMRNDLIFNNKR 622


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/139 (33%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
 Frame = -3

Query: 399  HRWNEVDNST-----SWKKIWSVSVPSKVKIFLWRALSNCLPTKCNLQTRRVQVDAVCPL 235
            H    VD ST     +W  +W++ VP KVK FLWR+  N LPT+  LQ R V     C L
Sbjct: 1401 HLSQHVDLSTHRCDGNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCAL 1460

Query: 234  CGSERETVDHCFIQCLFARTCWSLVCPEFMYDSTVNFN-----TWFEQVWNQLRDKAELI 70
            C +E E   H F  C  +R CW  +            N     T FE +      +  + 
Sbjct: 1461 CENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIW 1520

Query: 69   STICWGIWKARNDIVWNDQ 13
            + + W IWK RND +W ++
Sbjct: 1521 ACVMWSIWKQRNDCIWRNE 1539