BLASTX nr result

ID: Bupleurum21_contig00023271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023271
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321381.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondri...   458   e-126
emb|CBI34574.3| unnamed protein product [Vitis vinifera]              458   e-126
ref|XP_002877665.1| predicted protein [Arabidopsis lyrata subsp....   446   e-123
ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi...   444   e-122

>ref|XP_002321381.1| predicted protein [Populus trichocarpa] gi|222868377|gb|EEF05508.1|
           predicted protein [Populus trichocarpa]
          Length = 361

 Score =  469 bits (1206), Expect = e-130
 Identities = 218/291 (74%), Positives = 260/291 (89%)
 Frame = +2

Query: 2   VRTRDPQVLDTLDAVLDVGGVYDPTRDRFDHHQKGFNEVFGHGYSTKLSTAGLVYKHYGI 181
           +R+RDPQVL+TLDAVLDVGGVYDP+RDR+DHHQKGF+EVFGHG++TKLS+AGLVYKHYG 
Sbjct: 71  IRSRDPQVLETLDAVLDVGGVYDPSRDRYDHHQKGFHEVFGHGFTTKLSSAGLVYKHYGA 130

Query: 182 EIIAKEVQLDKGHPDVFKLFLAVYKNFIEAIDAVDNGVSQYAVDVLPHYVNNTSLSSRIG 361
           EIIAKE+QL++GH DV +LFLAVYKNF+EAIDA DNG++QY +D  P YVNNTSLS R+G
Sbjct: 131 EIIAKELQLNEGHQDVHELFLAVYKNFVEAIDAADNGINQYDIDQPPKYVNNTSLSQRVG 190

Query: 362 KLNLDWTDPDQSVEKENEAFQRAMILAGSEFVENINFHAKSWLPARSLVMDCLAARKDVD 541
           +LNLDW DP QS E+E+EAFQ AM +AG+EF+ENINFHAKSWLPARS+VM+CLA+R+D+D
Sbjct: 191 RLNLDWVDPSQSSEREDEAFQHAMKVAGTEFMENINFHAKSWLPARSIVMECLASREDID 250

Query: 542 SSGEIIRLPRSFPWKLHIFELEKELKFNPSIKYVIYQDDRSNNWRVQAVAISPDQYQSRK 721
            SGEI+ L RS PWKLHIFELE+++K NPSIKYVIYQDDRS NWR+QAVA+SPD+++SRK
Sbjct: 251 HSGEIMVLTRSCPWKLHIFELEEKMKINPSIKYVIYQDDRSENWRIQAVAVSPDKFESRK 310

Query: 722 PLLSQWRGLTGEELSEVAAIPGCIFVHMSGFIGANRSYDGALNMARASLKA 874
           PL   WRGL  +ELS+   I GC+FVHMSGFIG NRSY+GAL MARASLKA
Sbjct: 311 PLPLPWRGLVDDELSKATGIAGCVFVHMSGFIGGNRSYEGALAMARASLKA 361


>ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis
           vinifera]
          Length = 361

 Score =  458 bits (1179), Expect = e-126
 Identities = 214/290 (73%), Positives = 257/290 (88%)
 Frame = +2

Query: 2   VRTRDPQVLDTLDAVLDVGGVYDPTRDRFDHHQKGFNEVFGHGYSTKLSTAGLVYKHYGI 181
           VRTRD +VLD LDAVLDVGGVYDP+RDR+DHHQKGF EVFGHG+STKLS+AGLVYKH+G+
Sbjct: 71  VRTRDQKVLDGLDAVLDVGGVYDPSRDRYDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGM 130

Query: 182 EIIAKEVQLDKGHPDVFKLFLAVYKNFIEAIDAVDNGVSQYAVDVLPHYVNNTSLSSRIG 361
           EIIAKE+QLD+GHPDV +LFLAVYK+F+EA+DAVDNG++QY  D    YVNNT LSSR+G
Sbjct: 131 EIIAKELQLDQGHPDVLRLFLAVYKSFMEAVDAVDNGINQYDTDQPLRYVNNTHLSSRVG 190

Query: 362 KLNLDWTDPDQSVEKENEAFQRAMILAGSEFVENINFHAKSWLPARSLVMDCLAARKDVD 541
           KLNLDW DPDQS EKENEAF+RAM L+GSEF++N+ FHAKSWLPARS+VM+CLAAR D+D
Sbjct: 191 KLNLDWMDPDQSSEKENEAFERAMNLSGSEFLDNVRFHAKSWLPARSIVMECLAARMDID 250

Query: 542 SSGEIIRLPRSFPWKLHIFELEKELKFNPSIKYVIYQDDRSNNWRVQAVAISPDQYQSRK 721
            SGEI+ L R  PWKLH+FELE+E+K +P IKYV+YQDDRS +WRVQAVA++PD+++SRK
Sbjct: 251 PSGEIMVLNRFCPWKLHLFELEEEMKIDPPIKYVLYQDDRSKHWRVQAVAVAPDKFESRK 310

Query: 722 PLLSQWRGLTGEELSEVAAIPGCIFVHMSGFIGANRSYDGALNMARASLK 871
           PL SQWRGL  +ELS  A IPGC+FVHMSGFIG N++Y+GAL MA+ +LK
Sbjct: 311 PLPSQWRGLRDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAKDALK 360


>emb|CBI34574.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  458 bits (1179), Expect = e-126
 Identities = 214/290 (73%), Positives = 257/290 (88%)
 Frame = +2

Query: 2   VRTRDPQVLDTLDAVLDVGGVYDPTRDRFDHHQKGFNEVFGHGYSTKLSTAGLVYKHYGI 181
           VRTRD +VLD LDAVLDVGGVYDP+RDR+DHHQKGF EVFGHG+STKLS+AGLVYKH+G+
Sbjct: 48  VRTRDQKVLDGLDAVLDVGGVYDPSRDRYDHHQKGFGEVFGHGFSTKLSSAGLVYKHFGM 107

Query: 182 EIIAKEVQLDKGHPDVFKLFLAVYKNFIEAIDAVDNGVSQYAVDVLPHYVNNTSLSSRIG 361
           EIIAKE+QLD+GHPDV +LFLAVYK+F+EA+DAVDNG++QY  D    YVNNT LSSR+G
Sbjct: 108 EIIAKELQLDQGHPDVLRLFLAVYKSFMEAVDAVDNGINQYDTDQPLRYVNNTHLSSRVG 167

Query: 362 KLNLDWTDPDQSVEKENEAFQRAMILAGSEFVENINFHAKSWLPARSLVMDCLAARKDVD 541
           KLNLDW DPDQS EKENEAF+RAM L+GSEF++N+ FHAKSWLPARS+VM+CLAAR D+D
Sbjct: 168 KLNLDWMDPDQSSEKENEAFERAMNLSGSEFLDNVRFHAKSWLPARSIVMECLAARMDID 227

Query: 542 SSGEIIRLPRSFPWKLHIFELEKELKFNPSIKYVIYQDDRSNNWRVQAVAISPDQYQSRK 721
            SGEI+ L R  PWKLH+FELE+E+K +P IKYV+YQDDRS +WRVQAVA++PD+++SRK
Sbjct: 228 PSGEIMVLNRFCPWKLHLFELEEEMKIDPPIKYVLYQDDRSKHWRVQAVAVAPDKFESRK 287

Query: 722 PLLSQWRGLTGEELSEVAAIPGCIFVHMSGFIGANRSYDGALNMARASLK 871
           PL SQWRGL  +ELS  A IPGC+FVHMSGFIG N++Y+GAL MA+ +LK
Sbjct: 288 PLPSQWRGLRDDELSREAGIPGCVFVHMSGFIGGNQNYEGALAMAKDALK 337


>ref|XP_002877665.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323503|gb|EFH53924.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score =  446 bits (1147), Expect = e-123
 Identities = 208/289 (71%), Positives = 253/289 (87%)
 Frame = +2

Query: 2   VRTRDPQVLDTLDAVLDVGGVYDPTRDRFDHHQKGFNEVFGHGYSTKLSTAGLVYKHYGI 181
           +RTRD QVL+ LDA LDVGGVYDP  +R+DHHQKGF+EVFG G++TKLS+AGLVYKHYG+
Sbjct: 64  IRTRDHQVLEKLDAALDVGGVYDPQSERYDHHQKGFSEVFGLGFNTKLSSAGLVYKHYGL 123

Query: 182 EIIAKEVQLDKGHPDVFKLFLAVYKNFIEAIDAVDNGVSQYAVDVLPHYVNNTSLSSRIG 361
           EII+KE+QLD+ HPDVF+LFLAVYKNFIEA+DA+DNG+ QY  D  P YVNNTSL  RIG
Sbjct: 124 EIISKELQLDQRHPDVFRLFLAVYKNFIEAVDAIDNGIHQYDTDQPPRYVNNTSLGHRIG 183

Query: 362 KLNLDWTDPDQSVEKENEAFQRAMILAGSEFVENINFHAKSWLPARSLVMDCLAARKDVD 541
           +LNLDW +PDQS EKE+EAF RAM LAGSEF+E ++FHAKSWLPARS+VM+CLA R D+D
Sbjct: 184 RLNLDWIEPDQSSEKEDEAFHRAMELAGSEFLECVHFHAKSWLPARSIVMECLAKRYDID 243

Query: 542 SSGEIIRLPRSFPWKLHIFELEKELKFNPSIKYVIYQDDRSNNWRVQAVAISPDQYQSRK 721
           SSGEI++L +  PWKLHIFELE+E+K +P IKYV+YQDDRS NWR+QAV++SP++++SRK
Sbjct: 244 SSGEIMKLSKQCPWKLHIFELEEEMKIDPPIKYVLYQDDRSENWRIQAVSVSPERFESRK 303

Query: 722 PLLSQWRGLTGEELSEVAAIPGCIFVHMSGFIGANRSYDGALNMARASL 868
            L   WRGL  E+LSE ++IPGC+FVHMSGFIGANR+Y+GAL MARASL
Sbjct: 304 ALPLSWRGLEMEKLSEESSIPGCVFVHMSGFIGANRTYEGALAMARASL 352


>ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis]
           gi|223541884|gb|EEF43430.1| Protein MYG1, putative
           [Ricinus communis]
          Length = 373

 Score =  444 bits (1142), Expect = e-122
 Identities = 206/290 (71%), Positives = 253/290 (87%)
 Frame = +2

Query: 2   VRTRDPQVLDTLDAVLDVGGVYDPTRDRFDHHQKGFNEVFGHGYSTKLSTAGLVYKHYGI 181
           VR+RD QVL++LDAVLDVGGVYDP  DR+DHHQKGF EVFGHG++TKLS+AGLVYKH+G 
Sbjct: 83  VRSRDLQVLESLDAVLDVGGVYDPVHDRYDHHQKGFEEVFGHGFTTKLSSAGLVYKHFGK 142

Query: 182 EIIAKEVQLDKGHPDVFKLFLAVYKNFIEAIDAVDNGVSQYAVDVLPHYVNNTSLSSRIG 361
           EIIAKE+QLD+GHP+V +LFLA+YK+F+EAIDAVDNG++QY  D  P YVNNT LSSR+G
Sbjct: 143 EIIAKELQLDEGHPNVHRLFLAIYKSFMEAIDAVDNGINQYDTDKPPRYVNNTHLSSRVG 202

Query: 362 KLNLDWTDPDQSVEKENEAFQRAMILAGSEFVENINFHAKSWLPARSLVMDCLAARKDVD 541
           +LNLDW +PDQS EKENE FQRAM LAGSEF++++++HAKSWLPARS+VM+CL AR DVD
Sbjct: 203 RLNLDWIEPDQSPEKENEVFQRAMTLAGSEFLDSLHYHAKSWLPARSIVMECLEARSDVD 262

Query: 542 SSGEIIRLPRSFPWKLHIFELEKELKFNPSIKYVIYQDDRSNNWRVQAVAISPDQYQSRK 721
            SGEI+ L    PWKLH+FE+E+ELK  PSIKYV+YQDDRS +WRVQAVA++PD+++SR+
Sbjct: 263 PSGEIMVLATFCPWKLHLFEIEEELKIEPSIKYVLYQDDRSKHWRVQAVAVAPDRFESRR 322

Query: 722 PLLSQWRGLTGEELSEVAAIPGCIFVHMSGFIGANRSYDGALNMARASLK 871
            L +QWRGL  +ELS  + IP C+FVHMSGFIG N+SY+GAL MARA+LK
Sbjct: 323 ALPAQWRGLRDDELSRESGIPACVFVHMSGFIGGNKSYEGALAMARAALK 372


Top