BLASTX nr result

ID: Bupleurum21_contig00023270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023270
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468194.1| hypothetical protein SORBIDRAFT_01g041430 [S...    87   1e-15
gb|ACN32165.1| unknown [Zea mays] gi|413935154|gb|AFW69705.1| hy...    87   2e-15
ref|NP_001152085.1| LOC100285722 [Zea mays] gi|194699166|gb|ACF8...    87   2e-15
ref|NP_001150683.1| LOC100284316 [Zea mays] gi|194696928|gb|ACF8...    87   2e-15
gb|EAY89202.1| hypothetical protein OsI_10698 [Oryza sativa Indi...    86   2e-15

>ref|XP_002468194.1| hypothetical protein SORBIDRAFT_01g041430 [Sorghum bicolor]
           gi|241922048|gb|EER95192.1| hypothetical protein
           SORBIDRAFT_01g041430 [Sorghum bicolor]
          Length = 132

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
 Frame = -2

Query: 414 RDFGTLVMLVQETWGEIVTVELKTGQVYRGCMTECNDNWDCDLKQVVCIAKDGTESQLEE 235
           R  G  V L+ E  G +VTVELKTG+VYRG M EC DNW+C L+ +   AKDG  SQLE 
Sbjct: 3   RSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLENITFTAKDGKVSQLEH 62

Query: 234 INITGDEVMFVGIP------PIFDKLE 172
           + I G  V F+ IP      P+F +LE
Sbjct: 63  VFIRGSRVRFMIIPDMLKNAPMFKRLE 89


>gb|ACN32165.1| unknown [Zea mays] gi|413935154|gb|AFW69705.1| hypothetical protein
           ZEAMMB73_559735 [Zea mays]
          Length = 125

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
 Frame = -2

Query: 414 RDFGTLVMLVQETWGEIVTVELKTGQVYRGCMTECNDNWDCDLKQVVCIAKDGTESQLEE 235
           R  G  V L+ E  G +VTVELKTG+VYRG M EC DNW+C L+ +   AKDG  SQLE 
Sbjct: 3   RSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQLEH 62

Query: 234 INITGDEVMFVGIP------PIFDKLE 172
           + I G  V F+ IP      P+F +LE
Sbjct: 63  VFIRGSRVRFMIIPDMLKNAPMFKRLE 89


>ref|NP_001152085.1| LOC100285722 [Zea mays] gi|194699166|gb|ACF83667.1| unknown [Zea
           mays] gi|195652485|gb|ACG45710.1| small nuclear
           ribonucleoprotein Sm D3 [Zea mays]
           gi|413935155|gb|AFW69706.1| Small nuclear
           ribonucleoprotein Sm D3 [Zea mays]
          Length = 132

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
 Frame = -2

Query: 414 RDFGTLVMLVQETWGEIVTVELKTGQVYRGCMTECNDNWDCDLKQVVCIAKDGTESQLEE 235
           R  G  V L+ E  G +VTVELKTG+VYRG M EC DNW+C L+ +   AKDG  SQLE 
Sbjct: 3   RSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQLEH 62

Query: 234 INITGDEVMFVGIP------PIFDKLE 172
           + I G  V F+ IP      P+F +LE
Sbjct: 63  VFIRGSRVRFMIIPDMLKNAPMFKRLE 89


>ref|NP_001150683.1| LOC100284316 [Zea mays] gi|194696928|gb|ACF82548.1| unknown [Zea
           mays] gi|195619600|gb|ACG31630.1| small nuclear
           ribonucleoprotein Sm D3 [Zea mays]
           gi|195641042|gb|ACG39989.1| small nuclear
           ribonucleoprotein Sm D3 [Zea mays]
           gi|413956400|gb|AFW89049.1| Small nuclear
           ribonucleoprotein Sm D3 [Zea mays]
          Length = 132

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
 Frame = -2

Query: 414 RDFGTLVMLVQETWGEIVTVELKTGQVYRGCMTECNDNWDCDLKQVVCIAKDGTESQLEE 235
           R  G  V L+ E  G +VTVELKTG+VYRG M EC DNW+C L+ +   AKDG  SQLE 
Sbjct: 3   RSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQLEH 62

Query: 234 INITGDEVMFVGIP------PIFDKLE 172
           + I G  V F+ IP      P+F +LE
Sbjct: 63  VFIRGSRVRFMIIPDMLKNAPMFKRLE 89


>gb|EAY89202.1| hypothetical protein OsI_10698 [Oryza sativa Indica Group]
           gi|125585557|gb|EAZ26221.1| hypothetical protein
           OsJ_10089 [Oryza sativa Japonica Group]
          Length = 134

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/87 (50%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
 Frame = -2

Query: 414 RDFGTLVMLVQETWGEIVTVELKTGQVYRGCMTECNDNWDCDLKQVVCIAKDGTESQLEE 235
           R  G  V L+ E  G +VTVELKTG+VYRG M EC DNW+C L  +   AKDG  SQLE 
Sbjct: 3   RSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDGKVSQLEH 62

Query: 234 INITGDEVMFVGIP------PIFDKLE 172
           + I G  V F+ IP      P+F +LE
Sbjct: 63  VFIRGSRVRFMIIPDMLKNAPMFKRLE 89


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