BLASTX nr result

ID: Bupleurum21_contig00023269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023269
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284692.1| PREDICTED: putative clathrin assembly protei...   127   3e-27
ref|XP_002284689.2| PREDICTED: putative clathrin assembly protei...   127   3e-27
ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus...   123   5e-26
gb|AEW69791.1| Hop-interacting protein THI028 [Solanum lycopersi...   122   9e-26
ref|XP_002315872.1| predicted protein [Populus trichocarpa] gi|2...   122   9e-26

>ref|XP_002284692.1| PREDICTED: putative clathrin assembly protein At2g01600-like
           isoform 2 [Vitis vinifera]
          Length = 553

 Score =  127 bits (319), Expect = 3e-27
 Identities = 60/73 (82%), Positives = 64/73 (87%)
 Frame = -1

Query: 780 QAKDLDPTGWELALVTTPGSNISSVQDRQLAGGLDTLTLSSLYDEGAYRASQQPLYGTPA 601
           QAKD DPTGWELALVTTP SNISS  +RQLAGGLDTLTL+SLYDEGAYRA+QQP+YG PA
Sbjct: 404 QAKDFDPTGWELALVTTPSSNISSANERQLAGGLDTLTLTSLYDEGAYRAAQQPVYGAPA 463

Query: 600 PNPFGAPDPFAFS 562
           PNPF   DPFA S
Sbjct: 464 PNPFEVHDPFAVS 476



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/45 (62%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = -3

Query: 412 QPQHQPNLMMAPQNPFIDSGFGAFPVN-NGAHTQTSNPFGSTGLL 281
           Q Q Q +LM  P NPF D+GFGAFP N   AH Q +NPFGST LL
Sbjct: 509 QQQQQQHLMFGPPNPFGDAGFGAFPRNTTTAHPQNNNPFGSTSLL 553


>ref|XP_002284689.2| PREDICTED: putative clathrin assembly protein At2g01600-like
           isoform 1 [Vitis vinifera] gi|297737667|emb|CBI26868.3|
           unnamed protein product [Vitis vinifera]
          Length = 567

 Score =  127 bits (319), Expect = 3e-27
 Identities = 60/73 (82%), Positives = 64/73 (87%)
 Frame = -1

Query: 780 QAKDLDPTGWELALVTTPGSNISSVQDRQLAGGLDTLTLSSLYDEGAYRASQQPLYGTPA 601
           QAKD DPTGWELALVTTP SNISS  +RQLAGGLDTLTL+SLYDEGAYRA+QQP+YG PA
Sbjct: 418 QAKDFDPTGWELALVTTPSSNISSANERQLAGGLDTLTLTSLYDEGAYRAAQQPVYGAPA 477

Query: 600 PNPFGAPDPFAFS 562
           PNPF   DPFA S
Sbjct: 478 PNPFEVHDPFAVS 490



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/45 (62%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = -3

Query: 412 QPQHQPNLMMAPQNPFIDSGFGAFPVN-NGAHTQTSNPFGSTGLL 281
           Q Q Q +LM  P NPF D+GFGAFP N   AH Q +NPFGST LL
Sbjct: 523 QQQQQQHLMFGPPNPFGDAGFGAFPRNTTTAHPQNNNPFGSTSLL 567


>ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223532822|gb|EEF34597.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 567

 Score =  123 bits (308), Expect = 5e-26
 Identities = 58/73 (79%), Positives = 63/73 (86%)
 Frame = -1

Query: 780 QAKDLDPTGWELALVTTPGSNISSVQDRQLAGGLDTLTLSSLYDEGAYRASQQPLYGTPA 601
           Q KD DPTGWELALVTTP +NISSV DRQLAGGLDTLTL+SLYD+ AYRA+QQP+YG PA
Sbjct: 421 QPKDFDPTGWELALVTTPSANISSVNDRQLAGGLDTLTLNSLYDDVAYRAAQQPVYGAPA 480

Query: 600 PNPFGAPDPFAFS 562
           PNPF   DPFA S
Sbjct: 481 PNPFEVHDPFAMS 493



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -3

Query: 418 YSQPQHQPNLMMAPQNPFIDSGFGAFPVNNGAHTQTSNPFGSTGLL 281
           Y QPQ Q +LMM+P NPF D+GFG FPVN   H  ++NPFGSTGLL
Sbjct: 522 YPQPQQQQHLMMSPANPFGDAGFGTFPVNTVTHPHSNNPFGSTGLL 567


>gb|AEW69791.1| Hop-interacting protein THI028 [Solanum lycopersicum]
          Length = 563

 Score =  122 bits (306), Expect = 9e-26
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = -1

Query: 780 QAKDLDPTGWELALVTTPGSNISSVQDRQLAGGLDTLTLSSLYDEGAYRASQQPLYGTPA 601
           Q KD DPTGWELALVTTP S++S+ Q+RQLAGGLD+LTL+SLYDEGAYRASQ+P+YG PA
Sbjct: 420 QPKDFDPTGWELALVTTPSSDLSAAQERQLAGGLDSLTLNSLYDEGAYRASQRPVYGAPA 479

Query: 600 PNPFGAPDPFAFS 562
           PNPF   DPFA S
Sbjct: 480 PNPFEVADPFAMS 492



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = -3

Query: 418 YSQPQHQPNLMMAPQNPFIDSGFGAFPVNNGAHTQTSNPFGSTGLL 281
           Y QPQ   N M+ P NPF D+GF AFP N+ AH QT+NPFGSTGL+
Sbjct: 521 YPQPQ---NPMLNPHNPFGDAGFSAFPTNHVAHPQTTNPFGSTGLI 563


>ref|XP_002315872.1| predicted protein [Populus trichocarpa] gi|222864912|gb|EEF02043.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  122 bits (306), Expect = 9e-26
 Identities = 57/73 (78%), Positives = 62/73 (84%)
 Frame = -1

Query: 780 QAKDLDPTGWELALVTTPGSNISSVQDRQLAGGLDTLTLSSLYDEGAYRASQQPLYGTPA 601
           QAKD DPTGWELALVTTP SNIS+  +RQLAGGLD+LTL SLY EGAYRA+QQP+YG PA
Sbjct: 407 QAKDFDPTGWELALVTTPSSNISATNERQLAGGLDSLTLDSLYHEGAYRAAQQPVYGAPA 466

Query: 600 PNPFGAPDPFAFS 562
           PNPF   DPFA S
Sbjct: 467 PNPFEVQDPFALS 479


Top