BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023260
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi...   327   1e-87
ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|2...   326   3e-87
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]   326   4e-87
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,...   310   3e-82
ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containi...   304   1e-80

>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
            [Vitis vinifera]
          Length = 1008

 Score =  327 bits (839), Expect = 1e-87
 Identities = 157/216 (72%), Positives = 188/216 (87%)
 Frame = +3

Query: 6    SQLLRDCTSYNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSE 185
            S LLRDC S+NKVMACYATNGQL  CGELLHEMI+ +ILP++GTFKV+FT+LKKGG+ +E
Sbjct: 792  SGLLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTE 851

Query: 186  AVSQLESSYHEGKPYSTEVILTSVYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAY 365
            AV+QLESSY EGKPY+ + ++TSV+S VGLHAFAL+SCETFL AE  LDS  YNVAIYAY
Sbjct: 852  AVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIYAY 911

Query: 366  GAAGRTNEALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSE 545
            GA+G  ++AL +FMKMQDEGLEPD+VT+INL  CYGKA MLEG+KRI+S+LKY EI+P+E
Sbjct: 912  GASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNE 971

Query: 546  SLYKAVIDAYRNANRQDLAELVNQEMKFALDTQSNP 653
            SL+KA+IDAYR+A R DLAELV+QEMKFA DT   P
Sbjct: 972  SLFKAIIDAYRSAKRHDLAELVSQEMKFAFDTTMLP 1007



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 2/205 (0%)
 Frame = +3

Query: 18   RDCTSYNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSEAVSQ 197
            +D   YN ++  Y       +   L   M N    PN  T+  L  +   G +  EA   
Sbjct: 552  KDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGI 611

Query: 198  LESSYHEG-KPYS-TEVILTSVYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAYGA 371
            L      G KP   T   + + Y+ +G    A+   E  ++     +   Y   I  +  
Sbjct: 612  LAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSE 671

Query: 372  AGRTNEALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSESL 551
             G   EAL  F KM + G+  + +   +L+  Y K   LEG K ++  +K  E  P    
Sbjct: 672  TGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVA 731

Query: 552  YKAVIDAYRNANRQDLAELVNQEMK 626
              ++I+ Y +      A+L+  +++
Sbjct: 732  SNSMINLYADLGLVSEAKLIFDDLR 756


>ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|222857749|gb|EEE95296.1|
            predicted protein [Populus trichocarpa]
          Length = 810

 Score =  326 bits (836), Expect = 3e-87
 Identities = 155/231 (67%), Positives = 193/231 (83%)
 Frame = +3

Query: 6    SQLLRDCTSYNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSE 185
            S LLRDC SYNKVMACYATNGQL EC ELLHEMI +K+LP+ GTFK+LFT+LKKGG  SE
Sbjct: 580  SGLLRDCVSYNKVMACYATNGQLRECAELLHEMIGQKLLPDGGTFKILFTVLKKGGFPSE 639

Query: 186  AVSQLESSYHEGKPYSTEVILTSVYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAY 365
             ++QLES+Y EGKPY+ + ++TS++SVVGLHA AL+SCE+F KAE  LDSFAYNVAIYAY
Sbjct: 640  GIAQLESAYLEGKPYARQAVITSIFSVVGLHALALESCESFTKAEVALDSFAYNVAIYAY 699

Query: 366  GAAGRTNEALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSE 545
            G++G  ++AL  FMK QDEGLEPD+VT INLV CYGKA M+EGVKRI+S+LKYGEI P++
Sbjct: 700  GSSGEIDKALKTFMKRQDEGLEPDLVTSINLVHCYGKAGMVEGVKRIYSQLKYGEIKPND 759

Query: 546  SLYKAVIDAYRNANRQDLAELVNQEMKFALDTQSNPESEMDEVGHKNPLDY 698
            SL KAV+DAY+NANR DLAELVNQ+++F  D+Q   +SE++    ++ L +
Sbjct: 760  SLVKAVVDAYKNANRHDLAELVNQDIRFGFDSQQYSDSEIEAGSDESSLGF 810



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 4/202 (1%)
 Frame = +3

Query: 24   CTSYNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSEAVSQLE 203
            C +++ VMACYA  GQL +  ++  EM+   + PN   +  L     + G   EA+    
Sbjct: 412  CLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYFR 471

Query: 204  SSYHEGKPYSTEVILTS---VYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAYGAA 374
                 G P + +++LTS   VYS +G    A    +     E   D  A N  I  Y   
Sbjct: 472  MMEESGIP-ANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGPDIIASNSMISLYADL 530

Query: 375  GRTNEALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSESLY 554
            G  +EA  +F  +++ G + D V+F  ++  Y    ML+    I   +K   +      Y
Sbjct: 531  GMISEAELVFKNLRENG-QADGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCVSY 589

Query: 555  KAVIDAY-RNANRQDLAELVNQ 617
              V+  Y  N   ++ AEL+++
Sbjct: 590  NKVMACYATNGQLRECAELLHE 611



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 2/200 (1%)
 Frame = +3

Query: 33  YNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSEAVSQLESSY 212
           YN ++  Y       +   L   M N    P+  T+  L  +   G +  +A   L+   
Sbjct: 345 YNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQ 404

Query: 213 HEG-KPYS-TEVILTSVYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAYGAAGRTN 386
             G KP   T   + + Y+ +G  + A+   +  +KA    +   Y   I  +   G   
Sbjct: 405 EAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVE 464

Query: 387 EALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSESLYKAVI 566
           EAL  F  M++ G+  + +   +L+  Y K    +G K ++ ++K  E  P      ++I
Sbjct: 465 EALKYFRMMEESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGPDIIASNSMI 524

Query: 567 DAYRNANRQDLAELVNQEMK 626
             Y +      AELV + ++
Sbjct: 525 SLYADLGMISEAELVFKNLR 544


>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
          Length = 1313

 Score =  326 bits (835), Expect = 4e-87
 Identities = 156/216 (72%), Positives = 187/216 (86%)
 Frame = +3

Query: 6    SQLLRDCTSYNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSE 185
            S  LRDC S+NKVMACYATNGQL  CGELLHEMI+ +ILP++GTFKV+FT+LKKGG+ +E
Sbjct: 1097 SGFLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTE 1156

Query: 186  AVSQLESSYHEGKPYSTEVILTSVYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAY 365
            AV+QLESSY EGKPY+ + ++TSV+S VGLHAFAL+SCETFL AE  LDS  YNVAIYAY
Sbjct: 1157 AVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIYAY 1216

Query: 366  GAAGRTNEALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSE 545
            GA+G  ++AL +FMKMQDEGLEPD+VT+INL  CYGKA MLEG+KRI+S+LKY EI+P+E
Sbjct: 1217 GASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNE 1276

Query: 546  SLYKAVIDAYRNANRQDLAELVNQEMKFALDTQSNP 653
            SL+KA+IDAYR+A R DLAELV+QEMKFA DT   P
Sbjct: 1277 SLFKAIIDAYRSAKRHDLAELVSQEMKFAFDTTMLP 1312



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 47/205 (22%), Positives = 81/205 (39%), Gaps = 2/205 (0%)
 Frame = +3

Query: 18   RDCTSYNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSEAVSQ 197
            +D   YN ++  Y       +   L   M N    PN  T+  L  +   G +  EA   
Sbjct: 857  KDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDI 916

Query: 198  LESSYHEG-KPYS-TEVILTSVYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAYGA 371
            L      G KP   T   + + Y+ +G    A+   E  ++     +   Y   I  +  
Sbjct: 917  LAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSE 976

Query: 372  AGRTNEALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSESL 551
             G   EAL  F KM + G+  + +   +L+  Y K   LEG K ++  +K  E  P    
Sbjct: 977  TGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVA 1036

Query: 552  YKAVIDAYRNANRQDLAELVNQEMK 626
              ++I+ Y +      A+L+  +++
Sbjct: 1037 SNSMINLYADLGLVSEAKLIFDDLR 1061


>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1029

 Score =  310 bits (793), Expect = 3e-82
 Identities = 147/221 (66%), Positives = 184/221 (83%)
 Frame = +3

Query: 6    SQLLRDCTSYNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSE 185
            S LLRD  SYNKVM CYATNGQL+ECGELLHEMI +K+ P+ GTFK+LFT+LKKGG+ +E
Sbjct: 790  SGLLRDSVSYNKVMTCYATNGQLLECGELLHEMIKKKLFPDGGTFKILFTVLKKGGLPTE 849

Query: 186  AVSQLESSYHEGKPYSTEVILTSVYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAY 365
            AV QLESSYHEGKPY+ + ++TSV+S+VGLHA A++SC+ F KA+  LD FAYNVAI+AY
Sbjct: 850  AVMQLESSYHEGKPYARQAVITSVFSLVGLHALAMESCKIFTKADIALDLFAYNVAIFAY 909

Query: 366  GAAGRTNEALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSE 545
            G++G  ++ALN FMKMQDEGLEPD+VT I LV CYGKA M+EGVKRI+S+LKY +I PS+
Sbjct: 910  GSSGEIDKALNTFMKMQDEGLEPDLVTSICLVYCYGKAGMVEGVKRIYSQLKYRDIKPSD 969

Query: 546  SLYKAVIDAYRNANRQDLAELVNQEMKFALDTQSNPESEMD 668
            S +KAV+DAY +ANR DLAELVNQE++   D+    +S+ D
Sbjct: 970  SAFKAVVDAYEDANRHDLAELVNQELRLGFDSPRFSDSDSD 1010


>ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
            [Glycine max]
          Length = 963

 Score =  304 bits (779), Expect = 1e-80
 Identities = 144/221 (65%), Positives = 186/221 (84%)
 Frame = +3

Query: 6    SQLLRDCTSYNKVMACYATNGQLVECGELLHEMINEKILPNSGTFKVLFTILKKGGISSE 185
            S LLRDC SYNKV+ CYA NGQ  ECGEL+HEMI++K+LPN GTFKVLFTILKKGGI +E
Sbjct: 719  SGLLRDCVSYNKVLVCYAANGQFYECGELIHEMISQKLLPNDGTFKVLFTILKKGGIPTE 778

Query: 186  AVSQLESSYHEGKPYSTEVILTSVYSVVGLHAFALKSCETFLKAEAHLDSFAYNVAIYAY 365
            AV+QLESSY EGKPY+ +   T++YS+VG+H  AL+S +TF+++E  LDS A+NVAIYAY
Sbjct: 779  AVAQLESSYQEGKPYARQTTFTALYSLVGMHNLALESAQTFIESEVDLDSSAFNVAIYAY 838

Query: 366  GAAGRTNEALNIFMKMQDEGLEPDMVTFINLVACYGKASMLEGVKRIHSRLKYGEIDPSE 545
            G+AG  N+ALNI+MKM+DE L PD+VT+I LV CYGKA M+EGVK+I+S+L+YGEI+ +E
Sbjct: 839  GSAGDINKALNIYMKMRDEHLGPDLVTYIYLVGCYGKAGMVEGVKQIYSQLEYGEIESNE 898

Query: 546  SLYKAVIDAYRNANRQDLAELVNQEMKFALDTQSNPESEMD 668
            SL+KA+IDAY+  NR+DLAELV+QEMKF  +++ + E E +
Sbjct: 899  SLFKAIIDAYKICNRKDLAELVSQEMKFTFNSKEHSEIESE 939