BLASTX nr result

ID: Bupleurum21_contig00023259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023259
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   545   e-153
ref|XP_002513074.1| Ubiquitin ligase SINAT5, putative [Ricinus c...   541   e-152
ref|XP_002303919.1| predicted protein [Populus trichocarpa] gi|1...   535   e-150
ref|XP_004143754.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   529   e-148
ref|XP_004142422.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   524   e-146

>ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
           gi|147807603|emb|CAN68850.1| hypothetical protein
           VITISV_003067 [Vitis vinifera]
           gi|297742680|emb|CBI35133.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score =  545 bits (1404), Expect = e-153
 Identities = 253/304 (83%), Positives = 274/304 (90%), Gaps = 4/304 (1%)
 Frame = -2

Query: 931 MASGNSYLDE----SEVIDTAQSDDMTDVTEYAKETLHIVRKPSLTVSSSVRELLECPVC 764
           MASGN+Y D+    SEVID  QS+DM +V+E+  +      KP++TVSSSVRELLECPVC
Sbjct: 1   MASGNTYFDDMRSKSEVIDPPQSEDMMEVSEHVNDPAQTTLKPNVTVSSSVRELLECPVC 60

Query: 763 LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCQYHSF 584
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC+Y SF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF 120

Query: 583 GCVGIFPYYNKLNHENGCAFRPYNCPYAGSECTVIGDISYLVEHLRDDHKVDMHYGCTFN 404
           GC+GI+PYY+KL HE+ C +RPYNCPYAGSECTVIGDI YLV HL+DDHKVDMH G TFN
Sbjct: 121 GCLGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 403 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDENDAKKYC 224
           HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGD+N+AK Y 
Sbjct: 181 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 223 YSLEVGGFGRKITWQGEPRSIRDSHSKVRDNFDGLIIQRNMALFFSGGDQKELKLRVTGR 44
           YSLEVGG GRK+ WQG PRSIRDSH KVRD+FDGLIIQRNMALFFSGGD+KELKLRVTGR
Sbjct: 241 YSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 43  IWKE 32
           IWKE
Sbjct: 301 IWKE 304


>ref|XP_002513074.1| Ubiquitin ligase SINAT5, putative [Ricinus communis]
           gi|223548085|gb|EEF49577.1| Ubiquitin ligase SINAT5,
           putative [Ricinus communis]
          Length = 305

 Score =  541 bits (1395), Expect = e-152
 Identities = 253/304 (83%), Positives = 270/304 (88%), Gaps = 4/304 (1%)
 Frame = -2

Query: 931 MASGNSYLDE----SEVIDTAQSDDMTDVTEYAKETLHIVRKPSLTVSSSVRELLECPVC 764
           MASGN + D+     EVID   S+DM DV E   +      KP++TVSSSVRELLECPVC
Sbjct: 1   MASGNPFFDDLRSKPEVIDPPPSEDMMDVGESVNDPAQTAMKPNVTVSSSVRELLECPVC 60

Query: 763 LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCQYHSF 584
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC+YHSF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHSF 120

Query: 583 GCVGIFPYYNKLNHENGCAFRPYNCPYAGSECTVIGDISYLVEHLRDDHKVDMHYGCTFN 404
           GCVGI+PYY+KL HE+ C +RPYNCPYAGSECTVIGDI YLV HL+DDHKVDMH G TFN
Sbjct: 121 GCVGIYPYYSKLKHESQCVYRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 403 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDENDAKKYC 224
           HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGD+N+AK Y 
Sbjct: 181 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYT 240

Query: 223 YSLEVGGFGRKITWQGEPRSIRDSHSKVRDNFDGLIIQRNMALFFSGGDQKELKLRVTGR 44
           YSLEVGG GRK+ WQG PRSIRDSH KVRD+FDGLIIQRNMALFFSGGD+KELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 43  IWKE 32
           IWKE
Sbjct: 301 IWKE 304


>ref|XP_002303919.1| predicted protein [Populus trichocarpa] gi|118483454|gb|ABK93626.1|
           unknown [Populus trichocarpa]
           gi|222841351|gb|EEE78898.1| predicted protein [Populus
           trichocarpa]
          Length = 305

 Score =  535 bits (1378), Expect = e-150
 Identities = 249/304 (81%), Positives = 269/304 (88%), Gaps = 4/304 (1%)
 Frame = -2

Query: 931 MASGNSYLDE----SEVIDTAQSDDMTDVTEYAKETLHIVRKPSLTVSSSVRELLECPVC 764
           MAS N + D+     EVID  Q++D+TD+ E   +      KP++TVSSSVRELLECPVC
Sbjct: 1   MASSNLFFDDIRNKPEVIDPPQNEDLTDIGESVNDPAQTALKPNVTVSSSVRELLECPVC 60

Query: 763 LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCQYHSF 584
           LNAMYPPIHQCSNGHTLCSGCKPRV NRCPTCRHELGNIRCLALEKVAASLELPC+Y SF
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVQNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF 120

Query: 583 GCVGIFPYYNKLNHENGCAFRPYNCPYAGSECTVIGDISYLVEHLRDDHKVDMHYGCTFN 404
           GC+GI+PYY+KL HE+ C FRPYNCPYAGSECTVIGDI YLV HL+DDHKVDMH G TFN
Sbjct: 121 GCIGIYPYYSKLKHESQCVFRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN 180

Query: 403 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDENDAKKYC 224
           HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGD+N+AK Y 
Sbjct: 181 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 240

Query: 223 YSLEVGGFGRKITWQGEPRSIRDSHSKVRDNFDGLIIQRNMALFFSGGDQKELKLRVTGR 44
           YSLEVGG GRK+ WQG PRSIRDSH KVRD+FDGLIIQRNMALFFSGGD+KELKLRVTGR
Sbjct: 241 YSLEVGGGGRKMIWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 43  IWKE 32
           IWKE
Sbjct: 301 IWKE 304


>ref|XP_004143754.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis
           sativus] gi|449516798|ref|XP_004165433.1| PREDICTED: E3
           ubiquitin-protein ligase SINAT5-like [Cucumis sativus]
          Length = 305

 Score =  529 bits (1363), Expect = e-148
 Identities = 243/304 (79%), Positives = 269/304 (88%), Gaps = 4/304 (1%)
 Frame = -2

Query: 931 MASGNSYLDE----SEVIDTAQSDDMTDVTEYAKETLHIVRKPSLTVSSSVRELLECPVC 764
           MASG+ Y D+     EVID  Q++DM D+ E     +    KP++ VSSSVRELLECPVC
Sbjct: 1   MASGSPYFDDLRSKPEVIDPPQNEDMMDIRETVDHPIQNELKPNVAVSSSVRELLECPVC 60

Query: 763 LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCQYHSF 584
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC+YH++
Sbjct: 61  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYHTY 120

Query: 583 GCVGIFPYYNKLNHENGCAFRPYNCPYAGSECTVIGDISYLVEHLRDDHKVDMHYGCTFN 404
           GC+GI+PYY+K+ HE+ C +RPY+CPYAGSEC+++GDI YLV HL+DDHKVDMH G TFN
Sbjct: 121 GCIGIYPYYSKVKHESQCVYRPYSCPYAGSECSIVGDIPYLVAHLKDDHKVDMHSGSTFN 180

Query: 403 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDENDAKKYC 224
           HRYVKSNP EVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGD+NDAK Y 
Sbjct: 181 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNDAKNYS 240

Query: 223 YSLEVGGFGRKITWQGEPRSIRDSHSKVRDNFDGLIIQRNMALFFSGGDQKELKLRVTGR 44
           YSLEVGG GRK+ WQG PRSIRDSH KVRD+FDGLIIQRNMALFFSGGD+KELKLRVTGR
Sbjct: 241 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 300

Query: 43  IWKE 32
           IWKE
Sbjct: 301 IWKE 304


>ref|XP_004142422.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Cucumis
           sativus] gi|449524030|ref|XP_004169026.1| PREDICTED: E3
           ubiquitin-protein ligase SINAT5-like [Cucumis sativus]
          Length = 304

 Score =  524 bits (1350), Expect = e-146
 Identities = 247/304 (81%), Positives = 266/304 (87%), Gaps = 4/304 (1%)
 Frame = -2

Query: 931 MASGNSYLDE----SEVIDTAQSDDMTDVTEYAKETLHIVRKPSLTVSSSVRELLECPVC 764
           M S N Y D+     EVID  Q DDM DV+E   +      KP++ VSSSVRELLECPVC
Sbjct: 1   MTSANPYFDDIRNKPEVIDPPQDDDMMDVSESVSDPARSGGKPNV-VSSSVRELLECPVC 59

Query: 763 LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCQYHSF 584
           LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPC+Y +F
Sbjct: 60  LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQTF 119

Query: 583 GCVGIFPYYNKLNHENGCAFRPYNCPYAGSECTVIGDISYLVEHLRDDHKVDMHYGCTFN 404
           GCVGI+PYY+KL HE+ C +RPYNCPYAGSEC+VIGDI +LV HL+DDHKVDMH G TFN
Sbjct: 120 GCVGIYPYYSKLKHESQCIYRPYNCPYAGSECSVIGDIPFLVSHLKDDHKVDMHNGSTFN 179

Query: 403 HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDENDAKKYC 224
           HRYVKSNP EVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGD+N+AK Y 
Sbjct: 180 HRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYS 239

Query: 223 YSLEVGGFGRKITWQGEPRSIRDSHSKVRDNFDGLIIQRNMALFFSGGDQKELKLRVTGR 44
           YSLEVGG GRK+ WQG PRSIRDSH KVRD+FDGLIIQRNMALFFSGGD+KELKLRVTGR
Sbjct: 240 YSLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGR 299

Query: 43  IWKE 32
           IWKE
Sbjct: 300 IWKE 303


Top