BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023250
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   117   1e-24
ref|XP_002308050.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   114   6e-24
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   111   5e-23

>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = -2

Query: 327  HLSLIADHMTFSGRYRPMSRHGMISESLSPFLKMSFETSSKYLVEAASQGLIDDMKTPSA 148
            HLSLIAD MT +G YRPMSR G I+ES+SPF KMSFET+SK++VEAA  G ID+++TPSA
Sbjct: 1604 HLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSFETASKFIVEAALHGEIDNLETPSA 1663

Query: 147  RICLGLPPLLGTGSFDILQQL 85
            RICLGLP  +GTGSFD++Q+L
Sbjct: 1664 RICLGLPVKMGTGSFDLMQKL 1684


>ref|XP_002308050.1| predicted protein [Populus trichocarpa] gi|222854026|gb|EEE91573.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/81 (66%), Positives = 69/81 (85%)
 Frame = -2

Query: 327 HLSLIADHMTFSGRYRPMSRHGMISESLSPFLKMSFETSSKYLVEAASQGLIDDMKTPSA 148
           HLSLIAD+MT +G YRPMSR G ISES+SP  KMSFET+SK++VEAA  G +D+++ PSA
Sbjct: 382 HLSLIADYMTHTGEYRPMSRIGGISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSA 441

Query: 147 RICLGLPPLLGTGSFDILQQL 85
           R+CLGLP  +GTGSFD++Q+L
Sbjct: 442 RVCLGLPVKMGTGSFDLMQKL 462


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/81 (65%), Positives = 70/81 (86%)
 Frame = -2

Query: 327  HLSLIADHMTFSGRYRPMSRHGMISESLSPFLKMSFETSSKYLVEAASQGLIDDMKTPSA 148
            HLSLIAD MT SG YRPM+RHG I+ES+SPF KM+FET+SK++VEAAS G+ D++++ SA
Sbjct: 1587 HLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASA 1646

Query: 147  RICLGLPPLLGTGSFDILQQL 85
            RICLGLP  +GTG FD++Q++
Sbjct: 1647 RICLGLPVKMGTGCFDLMQKI 1667


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/81 (65%), Positives = 70/81 (86%)
 Frame = -2

Query: 327  HLSLIADHMTFSGRYRPMSRHGMISESLSPFLKMSFETSSKYLVEAASQGLIDDMKTPSA 148
            HLSLIAD MT SG YRPM+RHG I+ES+SPF KM+FET+SK++VEAAS G+ D++++ SA
Sbjct: 1658 HLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAASHGMTDNLESASA 1717

Query: 147  RICLGLPPLLGTGSFDILQQL 85
            RICLGLP  +GTG FD++Q++
Sbjct: 1718 RICLGLPVKMGTGCFDLMQKI 1738


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/81 (61%), Positives = 70/81 (86%)
 Frame = -2

Query: 327  HLSLIADHMTFSGRYRPMSRHGMISESLSPFLKMSFETSSKYLVEAASQGLIDDMKTPSA 148
            HLSL+AD+MT SG YRPMSR G IS+S+SPF +M+FET+ K++V+AA  G +D+++TPS+
Sbjct: 1570 HLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKFIVQAALHGEVDNLETPSS 1629

Query: 147  RICLGLPPLLGTGSFDILQQL 85
            RICLGLP  +GTGSFD++Q++
Sbjct: 1630 RICLGLPVKMGTGSFDLMQKI 1650