BLASTX nr result

ID: Bupleurum21_contig00023248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023248
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159647.1| PREDICTED: F-box protein CPR30-like [Cucumis...    69   9e-10
ref|XP_004147500.1| PREDICTED: F-box protein CPR30-like [Cucumis...    69   9e-10
ref|XP_004167623.1| PREDICTED: F-box protein CPR30-like [Cucumis...    66   8e-09
ref|XP_004169061.1| PREDICTED: putative F-box protein At3g21120-...    65   1e-08
ref|XP_004151361.1| PREDICTED: F-box protein CPR30-like [Cucumis...    64   2e-08

>ref|XP_004159647.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 365

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
 Frame = +3

Query: 90  YSVNLPLMPPFDNVNFVSSCYGIVCVSDTFHRYDSFRGEIYLFNPLNMMYKKLPSSIVYA 269
           + ++ PL   F  V  +   +G++C+  T   +D     I+L+NPL   ++KLP SI+  
Sbjct: 87  FDIDFPLNEYFRWVEIIGHSHGLICL--TVRHWD-----IFLWNPLTREFRKLPPSIILH 139

Query: 270 AAEDQQQHLLSSFD--VVFGFDSLSSDCKVLKIAYQRINGKLVKLQAAQLYSNNSNLWRE 443
            ++     + SSF   V FG+DS S D KV++        +L      ++Y  + + WRE
Sbjct: 140 PSD-----MYSSFTRAVGFGYDSKSMDFKVVRFMGFTEEPELCYCSRVEIYELSKDRWRE 194

Query: 444 IEVGIELPSLFFYPACPNLISGPVVNGI-LYLEAVNTIITFDLHNELFGLIPYPSFMHTR 620
           IE    L   F+ P C N+    + +   L  E    + TFD+ +E+FG I  P      
Sbjct: 195 IESPF-LGHRFWKP-CFNMCHEGMCSWCGLSEEGTEILETFDMSDEVFGQIQLPDDFDVM 252

Query: 621 KSSVLEFEGSVAVALLDEKG---VVSLWTVE 704
              +  F GS+ +     KG   + +LW ++
Sbjct: 253 DKCLGVFNGSIVLFPCPYKGYDRMFNLWEMK 283


>ref|XP_004147500.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 365

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
 Frame = +3

Query: 90  YSVNLPLMPPFDNVNFVSSCYGIVCVSDTFHRYDSFRGEIYLFNPLNMMYKKLPSSIVYA 269
           + ++ PL   F  V  +   +G++C+  T   +D     I+L+NPL   ++KLP SI+  
Sbjct: 87  FDIDFPLNEYFRWVEIIGHSHGLICL--TVRHWD-----IFLWNPLTREFRKLPPSIILH 139

Query: 270 AAEDQQQHLLSSFD--VVFGFDSLSSDCKVLKIAYQRINGKLVKLQAAQLYSNNSNLWRE 443
            ++     + SSF   V FG+DS S D KV++        +L      ++Y  + + WRE
Sbjct: 140 PSD-----MYSSFTRAVGFGYDSKSMDFKVVRFMGFTEEPELYYCSRVEIYELSKDRWRE 194

Query: 444 IEVGIELPSLFFYPACPNLISGPVVNGI-LYLEAVNTIITFDLHNELFGLIPYPSFMHTR 620
           IE    L   F+ P C N+    + +   L  E    + TFD+ +E+FG I  P      
Sbjct: 195 IESPF-LGHRFWKP-CFNMCHEGMCSWCGLSEEGTEILETFDISDEVFGQIQLPDDFDVM 252

Query: 621 KSSVLEFEGSVAVALLDEKG---VVSLWTVE 704
              +  F GS+ +     KG   + +LW ++
Sbjct: 253 DKCLGVFNGSIVLFPCPYKGYDRMFNLWEMK 283


>ref|XP_004167623.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 381

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
 Frame = +3

Query: 150 YGIVCVSDTFHRYDSFRGEIYLFNPLNMMYKKLPSSIVYAAA---EDQQQHLLSSFDVVF 320
           +G+VC+SD          + +L NP+   + KLP SI+       +D   +    F + F
Sbjct: 103 HGLVCLSDC--------DDAFLVNPMTRQFHKLPPSILIFRGCHHDDPDYYSAIPFTIGF 154

Query: 321 GFDSLSSDCKVLKIAYQRINGKLVKLQAAQLYSNNSNLWREIEVGIELPSLFFYPACPNL 500
           G+D+ SSD KV++I   R  G+       ++Y  + + WREIE      +  F P+    
Sbjct: 155 GYDAKSSDFKVVRIVSCR--GQAKSSMRVEIYDLSKDKWREIEAPDLCGNARFIPSFDMC 212

Query: 501 ISGPVV---NGILYLEAVNTIITFDLHNELFGLIPYPSFMHTRKSSV 632
             G       G   +  V++IITFD+  E+FG I  P   +  K  +
Sbjct: 213 HEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKI 259


>ref|XP_004169061.1| PREDICTED: putative F-box protein At3g21120-like [Cucumis sativus]
          Length = 341

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
 Frame = +3

Query: 90  YSVNLPLMPPFDNVNFVSSCYGIVCVSDTFHRYDSFRGEIYLFNPLNMMYKKLPSSIVYA 269
           + ++ PL   F +V  +   +G++C+      +D     IYL+NPL   ++KLP S++  
Sbjct: 87  FDIDFPLNEYFRSVEIIGHSHGLICL--IVRHWD-----IYLWNPLTREFRKLPPSVIVH 139

Query: 270 AAEDQQQHLLSSFDVVFGFDSLSSDCKVLKIAYQRINGKLVKLQAAQLYSNNSNLWREIE 449
             +     + +   V FG+DS S D KV++       G        ++Y  + + WREIE
Sbjct: 140 PRDRYNSFIKA---VGFGYDSKSMDFKVVRYMGLEEPG-FYYTSKVEIYDLSKDKWREIE 195

Query: 450 VGIELPSLFFYPACPNLISGPVVNGILYLEAVNTIITFDLHNELFGLIPYPSFMHTRKSS 629
               L   F+ P       G      L  E + T+ TF + +E+FG I  P+  +     
Sbjct: 196 SPF-LTHRFWKPCFNMCHEGTCYWWGLNEEGIKTLETFHMSDEVFGQIQVPNDFNVIDKC 254

Query: 630 VLEFEGSVAVALLDEKG---VVSLWTVE 704
           +  F GS+ +     KG   + ++W +E
Sbjct: 255 LGIFNGSIVLFPYLYKGYDRMFNVWKME 282


>ref|XP_004151361.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 366

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
 Frame = +3

Query: 90  YSVNLPLMPPFDNVNFVSSCYGIVCVSDTFHRYDSFRGEIYLFNPLNMMYKKLPSSIVYA 269
           + ++  L   F ++  +   +G++C+S           +IYL+NPL   ++KLP SI+  
Sbjct: 87  FDIDFSLNEYFRSIEIIGHSHGLICLSVC-------HWDIYLWNPLTTEFRKLPPSIILH 139

Query: 270 AAEDQQQHLLSSFD--VVFGFDSLSSDCKVLKIAYQRINGKLVKLQAAQLYSNNSNLWRE 443
             +       SSF   + FG+DS S D KV++        +       ++Y    + WRE
Sbjct: 140 PRDS-----YSSFTRAIGFGYDSKSMDFKVVRFMGFAKEPEFYYRTRVEIYDLTKDRWRE 194

Query: 444 IEVGIELPSLFFYPACPNLISGPVVNGILYLEAVNTIITFDLHNELFGLIPYP---SFMH 614
           IE    L   F+ P       G      L  E + T+ TFD+ +E+FG I  P     + 
Sbjct: 195 IESPF-LGHRFWKPCFNMCHEGTCYWWGLSEEGIETLETFDMSDEVFGQISIPEDFDVIA 253

Query: 615 TRKSSVLEFEGSVAVALLDEKGVVSLWTV 701
                +  F GS+ V     KG  +++ V
Sbjct: 254 DGPKCLGVFNGSIVVFPYPYKGYDTMFNV 282


Top