BLASTX nr result

ID: Bupleurum21_contig00023198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023198
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medi...    85   5e-15
ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago tru...    80   1e-13
ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vi...    79   4e-13
ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arab...    79   4e-13
emb|CBI32058.3| unnamed protein product [Vitis vinifera]               79   4e-13

>ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
            gi|355522600|gb|AET03054.1| Leucine-rich
            repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 1/127 (0%)
 Frame = -2

Query: 379  LPSLRELYAIGTTLLKKLPDIEPRQISTLPLMR-MELSRSGLTVLPRGLSQLSKLENLDL 203
            L  L EL A    L  K+PD    +   L L++ + L ++    LP  L  LS L+ L L
Sbjct: 842  LTLLSELDACAWRLSGKIPD----EFEKLSLLKTLNLGQNNFHSLPSSLKGLSILKELSL 897

Query: 202  VHCADLVSIPELPPNLKSISAYDCKSLEILPNVSDLKQLEDLYLTNCRRLTEIQGLEELT 23
             +C +L+S+P LP +L  ++A +C +LE + ++S+L+ LE+L LTNC++L +I GLE L 
Sbjct: 898  PNCTELISLPSLPSSLIMLNADNCYALETIHDMSNLESLEELKLTNCKKLIDIPGLECLK 957

Query: 22   SLRELHL 2
            SLR L+L
Sbjct: 958  SLRRLYL 964


>ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
            gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance
            protein [Medicago truncatula]
          Length = 1406

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/126 (38%), Positives = 78/126 (61%)
 Frame = -2

Query: 379  LPSLRELYAIGTTLLKKLPDIEPRQISTLPLMRMELSRSGLTVLPRGLSQLSKLENLDLV 200
            L  L EL A    L  K+PD +  ++S L  ++++  ++    LP  L  LS L+ L L 
Sbjct: 1032 LTLLHELDARAWRLSGKIPD-DFEKLSLLETLKLD--QNNFHSLPSSLKGLSILKELSLP 1088

Query: 199  HCADLVSIPELPPNLKSISAYDCKSLEILPNVSDLKQLEDLYLTNCRRLTEIQGLEELTS 20
            +C +L+S+P LP +L  ++A +C +LE + ++S L+ LE+L LTNC ++ +I GLE L S
Sbjct: 1089 NCTELISLPLLPSSLIKLNASNCYALETIHDMSSLESLEELELTNCEKVADIPGLECLKS 1148

Query: 19   LRELHL 2
            L+ L+L
Sbjct: 1149 LKRLYL 1154


>ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/122 (37%), Positives = 77/122 (63%)
 Frame = -2

Query: 379  LPSLRELYAIGTTLLKKLPDIEPRQISTLPLMRMELSRSGLTVLPRGLSQLSKLENLDLV 200
            L  L EL A    +  K+PD +  ++S+L ++   L R+  + LP  L  LS L  L L 
Sbjct: 1068 LSLLYELDARAWKISGKIPD-DFDKLSSLEILN--LGRNNFSSLPSSLRGLSILRKLLLP 1124

Query: 199  HCADLVSIPELPPNLKSISAYDCKSLEILPNVSDLKQLEDLYLTNCRRLTEIQGLEELTS 20
            HC +L ++P LP +L  ++A +C +LE++ ++S+L+ L++L LTNC++L +I G+E L S
Sbjct: 1125 HCEELKALPPLPSSLMEVNAANCYALEVISDLSNLESLQELNLTNCKKLVDIPGVECLKS 1184

Query: 19   LR 14
            L+
Sbjct: 1185 LK 1186


>ref|XP_002893349.1| hypothetical protein ARALYDRAFT_889995 [Arabidopsis lyrata subsp.
            lyrata] gi|297339191|gb|EFH69608.1| hypothetical protein
            ARALYDRAFT_889995 [Arabidopsis lyrata subsp. lyrata]
          Length = 1401

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/126 (38%), Positives = 75/126 (59%)
 Frame = -2

Query: 379  LPSLRELYAIGTTLLKKLPDIEPRQISTLPLMRMELSRSGLTVLPRGLSQLSKLENLDLV 200
            L SL EL A    +  K+PD +  ++S+L  M++ L  +    LP  L  LS L+ L L 
Sbjct: 1070 LTSLEELDACSWRISGKIPD-DLEKLSSL--MKLNLGNNYFHSLPSSLVGLSNLQELSLR 1126

Query: 199  HCADLVSIPELPPNLKSISAYDCKSLEILPNVSDLKQLEDLYLTNCRRLTEIQGLEELTS 20
             C +L  +P LP  L+ ++  +C SLE + ++S+L  LEDL LTNC ++ +I GLE L +
Sbjct: 1127 DCRELKRLPPLPCKLEHLNMANCFSLESVSDLSELTILEDLNLTNCGKVVDIPGLEHLMA 1186

Query: 19   LRELHL 2
            L+ L++
Sbjct: 1187 LKRLYM 1192


>emb|CBI32058.3| unnamed protein product [Vitis vinifera]
          Length = 1344

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/122 (37%), Positives = 77/122 (63%)
 Frame = -2

Query: 379  LPSLRELYAIGTTLLKKLPDIEPRQISTLPLMRMELSRSGLTVLPRGLSQLSKLENLDLV 200
            L  L EL A    +  K+PD +  ++S+L ++   L R+  + LP  L  LS L  L L 
Sbjct: 974  LSLLYELDARAWKISGKIPD-DFDKLSSLEILN--LGRNNFSSLPSSLRGLSILRKLLLP 1030

Query: 199  HCADLVSIPELPPNLKSISAYDCKSLEILPNVSDLKQLEDLYLTNCRRLTEIQGLEELTS 20
            HC +L ++P LP +L  ++A +C +LE++ ++S+L+ L++L LTNC++L +I G+E L S
Sbjct: 1031 HCEELKALPPLPSSLMEVNAANCYALEVISDLSNLESLQELNLTNCKKLVDIPGVECLKS 1090

Query: 19   LR 14
            L+
Sbjct: 1091 LK 1092



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/122 (36%), Positives = 73/122 (59%)
 Frame = -2

Query: 370 LRELYAIGTTLLKKLPDIEPRQISTLPLMRMELSRSGLTVLPRGLSQLSKLENLDLVHCA 191
           L+EL A    +   + D E  ++S+L    + L  +    LP  L  LS L+NL L HC 
Sbjct: 40  LKELDARAWKISGSISDFE--KLSSLE--DLNLGHNNFCSLPSSLQGLSVLKNLFLPHCK 95

Query: 190 DLVSIPELPPNLKSISAYDCKSLEILPNVSDLKQLEDLYLTNCRRLTEIQGLEELTSLRE 11
           ++ S+P LP +L  ++  +C +L+ + ++S+LK LEDL LTNC+++ +I GL+ L SL+ 
Sbjct: 96  EINSLPPLPSSLIKLNVSNCCALQSVSDLSNLKSLEDLNLTNCKKIMDIPGLQCLKSLKR 155

Query: 10  LH 5
            +
Sbjct: 156 FY 157


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