BLASTX nr result

ID: Bupleurum21_contig00023182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023182
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44102.1| unknown [Medicago truncatula]                          107   1e-21
emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]           104   7e-21
ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tR...   102   2e-20
ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucum...   102   2e-20
ref|XP_003517240.1| PREDICTED: tyrosyl-tRNA synthetase-like [Gly...   102   2e-20

>gb|AFK44102.1| unknown [Medicago truncatula]
          Length = 137

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/67 (73%), Positives = 59/67 (88%)
 Frame = -3

Query: 342 NNGGRKTFTSFEELISDYEKGNVHPADLKPALAKAINKILQPVRDHFKEDSAAKELLRRV 163
           +NGG KTF SFEELI+DYE G +HPADLKPAL+K++NKIL+PVR HFK DS AKELL+RV
Sbjct: 71  DNGGNKTFKSFEELIADYESGELHPADLKPALSKSLNKILEPVRQHFKNDSNAKELLKRV 130

Query: 162 KSYKVNK 142
           K+Y+V K
Sbjct: 131 KAYRVTK 137


>emb|CAA71881.1| Tyrosyl-tRNA synthetase [Nicotiana tabacum]
          Length = 408

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/69 (69%), Positives = 58/69 (84%)
 Frame = -3

Query: 348 SDNNGGRKTFTSFEELISDYEKGNVHPADLKPALAKAINKILQPVRDHFKEDSAAKELLR 169
           S  NG  KT+ +FEEL +DYE GN+HPADLKPAL+KAINKILQPVRDHFK D  AK+L++
Sbjct: 340 SAENGADKTYKNFEELAADYESGNLHPADLKPALSKAINKILQPVRDHFKNDQKAKDLMK 399

Query: 168 RVKSYKVNK 142
           RVKS+KV +
Sbjct: 400 RVKSFKVTR 408


>ref|XP_004159946.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine--tRNA ligase-like [Cucumis
           sativus]
          Length = 387

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/67 (67%), Positives = 59/67 (88%)
 Frame = -3

Query: 342 NNGGRKTFTSFEELISDYEKGNVHPADLKPALAKAINKILQPVRDHFKEDSAAKELLRRV 163
           ++GG KTF++FEEL+SDY  G +HP DLKPAL+KA+NKIL+PVRDHFK DS AK+LL+RV
Sbjct: 321 DHGGNKTFSTFEELVSDYAAGELHPGDLKPALSKALNKILEPVRDHFKNDSNAKDLLKRV 380

Query: 162 KSYKVNK 142
           K+Y+V +
Sbjct: 381 KAYRVTR 387


>ref|XP_004143904.1| PREDICTED: tyrosine--tRNA ligase-like [Cucumis sativus]
          Length = 387

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/67 (67%), Positives = 59/67 (88%)
 Frame = -3

Query: 342 NNGGRKTFTSFEELISDYEKGNVHPADLKPALAKAINKILQPVRDHFKEDSAAKELLRRV 163
           ++GG KTF++FEEL+SDY  G +HP DLKPAL+KA+NKIL+PVRDHFK DS AK+LL+RV
Sbjct: 321 DHGGNKTFSTFEELVSDYAAGELHPGDLKPALSKALNKILEPVRDHFKNDSNAKDLLKRV 380

Query: 162 KSYKVNK 142
           K+Y+V +
Sbjct: 381 KAYRVTR 387


>ref|XP_003517240.1| PREDICTED: tyrosyl-tRNA synthetase-like [Glycine max]
          Length = 381

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/69 (68%), Positives = 59/69 (85%)
 Frame = -3

Query: 348 SDNNGGRKTFTSFEELISDYEKGNVHPADLKPALAKAINKILQPVRDHFKEDSAAKELLR 169
           S +NGG KTFTSF EL + YE G +HP DLKPALAK++NKIL+PVR+HF++DS AKELL+
Sbjct: 313 SADNGGNKTFTSFAELTAAYESGELHPGDLKPALAKSLNKILEPVREHFRKDSNAKELLK 372

Query: 168 RVKSYKVNK 142
           RVK+Y+V K
Sbjct: 373 RVKAYRVTK 381


Top