BLASTX nr result
ID: Bupleurum21_contig00023178
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00023178
(1470 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513311.1| splicing endonuclease positive effector sen1... 468 e-129
emb|CBI18449.3| unnamed protein product [Vitis vinifera] 459 e-126
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p... 424 e-116
ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi... 424 e-116
ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab... 422 e-116
>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
communis] gi|223547219|gb|EEF48714.1| splicing
endonuclease positive effector sen1, putative [Ricinus
communis]
Length = 2110
Score = 468 bits (1203), Expect = e-129
Identities = 270/535 (50%), Positives = 340/535 (63%), Gaps = 46/535 (8%)
Frame = -1
Query: 1470 PSEHTLFDAVVIDEAAQALEPATLIPLQLLKSNGIKCIMVGDPKQLPATVISNVASKYQY 1291
PSE TLFDAV+IDEAAQALEPATLIPLQLLKSNG KCIMVGDPKQLPATV+SNVASK+ Y
Sbjct: 1457 PSERTLFDAVIIDEAAQALEPATLIPLQLLKSNGTKCIMVGDPKQLPATVLSNVASKFLY 1516
Query: 1290 QCSMFERLQKAGHPVLMLTQQYRMHPEICRFPSQHFYDGKLLNGDLTSIKKVGFHKVKAL 1111
+CSMFERLQ+AGHPV MLT+QYRMHP+IC+FPS HFYDGKLLNG+ S K V FH+ + L
Sbjct: 1517 ECSMFERLQRAGHPVTMLTKQYRMHPDICQFPSLHFYDGKLLNGENMSSKLVPFHETEGL 1576
Query: 1110 GPYVFFDIVDGQELRGKSSGASSFYNESEAEAAVKVLSFLKSSYPSDFAGVKIGIVTPYK 931
GPY F+D++DGQELRGK+S A S YNE EA+AAV++L F K +PS+F G KIGI+TPYK
Sbjct: 1577 GPYAFYDVIDGQELRGKNSAAFSLYNEREADAAVELLRFFKKRHPSEFEGGKIGIITPYK 1636
Query: 930 SQLFLLRSRLSNKFGSSMTSVMEFNTVDGFQGREVDILILSTVRATACSADVE-IRSGNI 754
QL LLRSRLS+ FGSS+ + MEFNTVDGFQGREVDILILS+VRA V + S +I
Sbjct: 1637 CQLSLLRSRLSSAFGSSVIADMEFNTVDGFQGREVDILILSSVRAGEAYTHVNGVNSSSI 1696
Query: 753 GFVADVRRMNVALTRAKLSLWIFGHANTLMTNSNWKALLNDAKKRNLVISSKQPYNSIT- 577
GFVADVRRMNVALTRAKLSLWIFG+A TL N NW AL+ DAK+RNLVIS K+PY +T
Sbjct: 1697 GFVADVRRMNVALTRAKLSLWIFGNARTLQANHNWAALIKDAKQRNLVISVKRPYKFLTT 1756
Query: 576 --------ESTWNNNPNSECFNDHYVHLKHSEEGKEVGW--------------------- 484
E + N++ ++ F + K K +G
Sbjct: 1757 APRDHSAPEKSDNHSRQAKNFGNFREPSKQHRSSKHIGSVGTVTEDDVSANKDSVCSSKK 1816
Query: 483 -------------HAEEK-LKNAKSPHGRK-MSCSGSKASKNIEGEDRNTFQSRDADKPN 349
E + LKN KSP R+ + GSK S + + D++ P+
Sbjct: 1817 RGRDDHGILPVDDSGENRILKNVKSPISREYLKDGGSKCS-------HRSKKKLDSENPH 1869
Query: 348 IIKAITEHQVSAKKDIVLAHEDCNVNKSTKEVKSNITGHMKGDSSSSTFSKGKQRNLGNS 169
+ K T+ +++K + N+ K V K DS+ T + + ++
Sbjct: 1870 VSKR-TDKCMNSKSKLCEQETSNNLKKFKSNVVKGPNKSFKHDSNLETSTSPAEDSVKRM 1928
Query: 168 DSGNGKGMAHKIDGNNTDVASNSNTTIKRKQQRDAVDAILSTALRPSKKTETSGK 4
+ +G+ + ++ + KRKQQR+AVDAIL ++L SKK+E S K
Sbjct: 1929 GANDGRA--------PDQIGASEDLITKRKQQREAVDAILYSSLISSKKSEQSKK 1975
>emb|CBI18449.3| unnamed protein product [Vitis vinifera]
Length = 2154
Score = 459 bits (1180), Expect = e-126
Identities = 268/503 (53%), Positives = 337/503 (66%), Gaps = 15/503 (2%)
Frame = -1
Query: 1467 SEHTLFDAVVIDEAAQALEPATLIPLQLLKSNGIKCIMVGDPKQLPATVISNVASKYQYQ 1288
SE+ LFDAVVIDEAAQALEPATLIPLQLLKS+G +CIMVGDPKQLPATV+S+VASK++YQ
Sbjct: 1627 SENHLFDAVVIDEAAQALEPATLIPLQLLKSSGTRCIMVGDPKQLPATVLSSVASKFRYQ 1686
Query: 1287 CSMFERLQKAGHPVLMLTQQYRMHPEICRFPSQHFYDGKLLNGDLTSIKKVGFHKVKALG 1108
CSMFERLQ+AG+PV MLT+QYRMHPEICRFPS HFYD KLLNG+ S K FH+ + LG
Sbjct: 1687 CSMFERLQRAGYPVTMLTKQYRMHPEICRFPSLHFYDSKLLNGENMSSKLAPFHETEGLG 1746
Query: 1107 PYVFFDIVDGQELRGKSSGASSFYNESEAEAAVKVLSFLKSSYPSDFAGVKIGIVTPYKS 928
PYVFFD+VDGQE G++SG S NE EA+AAV+VL + +PS+F G +IGI+TPYK
Sbjct: 1747 PYVFFDVVDGQESHGRNSGTFSLCNEREADAAVEVLRLFRKRHPSEFVGGRIGIITPYKC 1806
Query: 927 QLFLLRSRLSNKFGSSMTSVMEFNTVDGFQGREVDILILSTVRATA-CSADVEIRSGNIG 751
QL LLRSR S+ FGSS+TS MEFNTVDGFQGREVDIL+LSTVRA CSA I S +IG
Sbjct: 1807 QLSLLRSRFSSAFGSSITSDMEFNTVDGFQGREVDILVLSTVRAAGPCSAASGINSSSIG 1866
Query: 750 FVADVRRMNVALTRAKLSLWIFGHANTLMTNSNWKALLNDAKKRNLVISSKQPYNSITES 571
FVADVRRMNVALTRAKLSLWI G+A TL TN NW AL+ DAK+RNLVIS+K PY S+ +
Sbjct: 1867 FVADVRRMNVALTRAKLSLWILGNARTLQTNCNWAALVKDAKERNLVISAKMPYQSMFKK 1926
Query: 570 TWNNNPNSECFNDHYVHLKHSEEGKEVGWHAEEKLKNAKSPHGRKMSCSGSKASKNIEGE 391
NP+SE +S+ H E+ +N+ S S S+ +K G+
Sbjct: 1927 AL-KNPSSE----------NSDYSSRQSRHVCERKENSVS--------SQSQINKRKAGD 1967
Query: 390 DRNTFQSRDADKPNIIKAITEHQVSAKKDI----VLAHE--DCNVNKSTKEVKSN---IT 238
+ + ++ + N +A AKK HE N ++S +E+ +
Sbjct: 1968 EHDLSARKEDVQSNKRRASELCDFLAKKKFPSSGKCTHEISQTNADRSEQEMGDGNKILK 2027
Query: 237 GHMKGDSSSSTFSKGKQRNLGNSDSGNGKGMAHKIDGNN-----TDVASNSNTTIKRKQQ 73
+ +S S G Q+++ S G + + D ++ +V + + KRKQQ
Sbjct: 2028 PQVLKGTSESLDHGGNQKSMEASTCSAG-SILEENDASDRRRALKEVDTAKDVISKRKQQ 2086
Query: 72 RDAVDAILSTALRPSKKTETSGK 4
R+AVDA+LS+AL PSKK+ S K
Sbjct: 2087 REAVDALLSSALIPSKKSAASLK 2109
>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
[Arabidopsis thaliana]
Length = 2142
Score = 424 bits (1091), Expect = e-116
Identities = 251/504 (49%), Positives = 319/504 (63%), Gaps = 21/504 (4%)
Frame = -1
Query: 1470 PSEHTLFDAVVIDEAAQALEPATLIPLQLLKSNGIKCIMVGDPKQLPATVISNVASKYQY 1291
PSE LFDAVVIDEAAQALEPATLIPLQLLKS G KCIMVGDPKQLPATV+SNVASK+ Y
Sbjct: 1517 PSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLY 1576
Query: 1290 QCSMFERLQKAGHPVLMLTQQYRMHPEICRFPSQHFYDGKLLNGDLTSIKKVGFHKVKAL 1111
+CSMFERLQ+AG+P+LMLTQQYRMHPEICRFPS HFYD KLLNG S K FH+ L
Sbjct: 1577 ECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNGVDMSSKSAPFHENHHL 1636
Query: 1110 GPYVFFDIVDGQELRGKSSGASSFYNESEAEAAVKVLSFLKSSYPSDFAGVKIGIVTPYK 931
GPYVF+DIVDGQE R S +SS NE EAEAAV++L F K YPS+F +IGI+TPYK
Sbjct: 1637 GPYVFYDIVDGQEHR--SGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAGRIGIITPYK 1694
Query: 930 SQLFLLRSRLSNKFGSSMTSVMEFNTVDGFQGREVDILILSTVRATACSADVEIRSGNIG 751
QL +LRSR + FG+ +T+ ME NTVDGFQG+EVDIL+LSTVRAT + D + IG
Sbjct: 1695 RQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHSAPD-GVNQSRIG 1753
Query: 750 FVADVRRMNVALTRAKLSLWIFGHANTLMTNSNWKALLNDAKKRNLVISSKQPYNSITES 571
FVADVRRMNVALTRAKLSLW+ G+ TL + NW AL+ DAK+R ++I K+PYN +
Sbjct: 1754 FVADVRRMNVALTRAKLSLWVLGNTRTLQRDHNWGALVKDAKEREVIIPVKRPYNYM--- 1810
Query: 570 TWNNNPNSECFNDHYVHLKHSEE-----GKEVGWHAEEKLKNAKSPHGRKMSCSGSK--- 415
F ++ + HSE K H+ K + A++ RK+ +
Sbjct: 1811 ----------FGENVMEQNHSENLPKNFPKPDKQHSRRKEQRAETSSDRKLRKTDGDVVP 1860
Query: 414 -ASKNIEGED--RNTFQSRDADKPNIIKAITEHQVSAKKDIVLAHEDCNVNKSTKEVKSN 244
+SK E + RN + + + ++ + +V++++ + +HE K +E SN
Sbjct: 1861 ISSKGSESKHTRRNAKEEASSQREKLVASC--EKVTSEETLRRSHEKKEKMKG-REKSSN 1917
Query: 243 --ITGHMKGDSSSSTFSKGKQRNLGNSDSGNGKGMAHKI--------DGNNTDVASNSNT 94
IT + +S K ++ DS KI GN ++ +
Sbjct: 1918 PEITDANSSKNENSNEWKKSKKASSKLDSSKRANPTDKIGQQDRQINKGNASNQGGVEDM 1977
Query: 93 TIKRKQQRDAVDAILSTALRPSKK 22
KRKQQR+AV AIL+++L PS K
Sbjct: 1978 ISKRKQQREAVAAILNSSLIPSHK 2001
>ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
gi|332191377|gb|AEE29498.1| hydrolase domain-containing
protein [Arabidopsis thaliana]
Length = 2127
Score = 424 bits (1091), Expect = e-116
Identities = 251/504 (49%), Positives = 319/504 (63%), Gaps = 21/504 (4%)
Frame = -1
Query: 1470 PSEHTLFDAVVIDEAAQALEPATLIPLQLLKSNGIKCIMVGDPKQLPATVISNVASKYQY 1291
PSE LFDAVVIDEAAQALEPATLIPLQLLKS G KCIMVGDPKQLPATV+SNVASK+ Y
Sbjct: 1611 PSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLY 1670
Query: 1290 QCSMFERLQKAGHPVLMLTQQYRMHPEICRFPSQHFYDGKLLNGDLTSIKKVGFHKVKAL 1111
+CSMFERLQ+AG+P+LMLTQQYRMHPEICRFPS HFYD KLLNG S K FH+ L
Sbjct: 1671 ECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDNKLLNGVDMSSKSAPFHENHHL 1730
Query: 1110 GPYVFFDIVDGQELRGKSSGASSFYNESEAEAAVKVLSFLKSSYPSDFAGVKIGIVTPYK 931
GPYVF+DIVDGQE R S +SS NE EAEAAV++L F K YPS+F +IGI+TPYK
Sbjct: 1731 GPYVFYDIVDGQEHR--SGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAGRIGIITPYK 1788
Query: 930 SQLFLLRSRLSNKFGSSMTSVMEFNTVDGFQGREVDILILSTVRATACSADVEIRSGNIG 751
QL +LRSR + FG+ +T+ ME NTVDGFQG+EVDIL+LSTVRAT + D + IG
Sbjct: 1789 RQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHSAPD-GVNQSRIG 1847
Query: 750 FVADVRRMNVALTRAKLSLWIFGHANTLMTNSNWKALLNDAKKRNLVISSKQPYNSITES 571
FVADVRRMNVALTRAKLSLW+ G+ TL + NW AL+ DAK+R ++I K+PYN +
Sbjct: 1848 FVADVRRMNVALTRAKLSLWVLGNTRTLQRDHNWGALVKDAKEREVIIPVKRPYNYM--- 1904
Query: 570 TWNNNPNSECFNDHYVHLKHSEE-----GKEVGWHAEEKLKNAKSPHGRKMSCSGSK--- 415
F ++ + HSE K H+ K + A++ RK+ +
Sbjct: 1905 ----------FGENVMEQNHSENLPKNFPKPDKQHSRRKEQRAETSSDRKLRKTDGDVVP 1954
Query: 414 -ASKNIEGED--RNTFQSRDADKPNIIKAITEHQVSAKKDIVLAHEDCNVNKSTKEVKSN 244
+SK E + RN + + + ++ + +V++++ + +HE K +E SN
Sbjct: 1955 ISSKGSESKHTRRNAKEEASSQREKLVASC--EKVTSEETLRRSHEKKEKMKG-REKSSN 2011
Query: 243 --ITGHMKGDSSSSTFSKGKQRNLGNSDSGNGKGMAHKI--------DGNNTDVASNSNT 94
IT + +S K ++ DS KI GN ++ +
Sbjct: 2012 PEITDANSSKNENSNEWKKSKKASSKLDSSKRANPTDKIGQQDRQINKGNASNQGGVEDM 2071
Query: 93 TIKRKQQRDAVDAILSTALRPSKK 22
KRKQQR+AV AIL+++L PS K
Sbjct: 2072 ISKRKQQREAVAAILNSSLIPSHK 2095
>ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein
ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata]
Length = 2129
Score = 422 bits (1086), Expect = e-116
Identities = 253/501 (50%), Positives = 313/501 (62%), Gaps = 25/501 (4%)
Frame = -1
Query: 1470 PSEHTLFDAVVIDEAAQALEPATLIPLQLLKSNGIKCIMVGDPKQLPATVISNVASKYQY 1291
PSE LFDAVVIDEAAQALEPATLIPLQLLKS G KCIMVGDPKQLPATV+SNVASK+ Y
Sbjct: 1516 PSEDNLFDAVVIDEAAQALEPATLIPLQLLKSRGTKCIMVGDPKQLPATVLSNVASKFLY 1575
Query: 1290 QCSMFERLQKAGHPVLMLTQQYRMHPEICRFPSQHFYDGKLLNGDLTSIKKVGFHKVKAL 1111
+CSMFERLQ+AG+P+LMLTQQYRMHPEICRFPS HFYD KLLNG S K FH+ L
Sbjct: 1576 ECSMFERLQRAGYPILMLTQQYRMHPEICRFPSMHFYDYKLLNGVDMSSKSAPFHESHHL 1635
Query: 1110 GPYVFFDIVDGQELRGKSSGASSFYNESEAEAAVKVLSFLKSSYPSDFAGVKIGIVTPYK 931
GPYVF+DIVDGQE R S +SS NE EAEAAV++L F K YPS+F +IGI+TPYK
Sbjct: 1636 GPYVFYDIVDGQEHR--SGDSSSVCNEQEAEAAVQLLRFFKKRYPSEFVAGRIGIITPYK 1693
Query: 930 SQLFLLRSRLSNKFGSSMTSVMEFNTVDGFQGREVDILILSTVRATACSADVEIRSGNIG 751
QL +LRSR + FG+ +T+ ME NTVDGFQGREVDIL+LSTVRAT D + IG
Sbjct: 1694 RQLAVLRSRFTGAFGAQVTADMEMNTVDGFQGREVDILVLSTVRATHSDPD-GVNQSRIG 1752
Query: 750 FVADVRRMNVALTRAKLSLWIFGHANTLMTNSNWKALLNDAKKRNLVISSKQPYNSITES 571
FVADVRRMNVALTRAKLSLW+ G+ TL + NW AL+ DAK+R ++I K+PYN++
Sbjct: 1753 FVADVRRMNVALTRAKLSLWVLGNTRTLQRDHNWGALVKDAKEREVIIPVKRPYNNM--- 1809
Query: 570 TWNNNPNSECFNDHYVHLKHSEE-----GKEVGWHAEEKLKNAKSPHGRKM--------- 433
F ++ + HSE K H+ K + A++ RKM
Sbjct: 1810 ----------FGEYVMEQNHSENLPKNFPKPEKQHSRRKEQRAETSSDRKMRKSDGDFVP 1859
Query: 432 -SCSGSK---ASKNIEGEDRNTFQSRDADKPNIIKAITEHQVSAKKDIVLAHEDCNVNKS 265
S GS+ + +N++ E + + + A + T + KK+ + E + ++
Sbjct: 1860 ISSRGSERKHSRRNVKEEASSQREKQAASCEKVASEETLKRSHEKKEKMKGREKSSNPEN 1919
Query: 264 TKEVKS---NITGHMKGDSSSSTFSKGKQRN----LGNSDSGNGKGMAHKIDGNNTDVAS 106
T S N K +SS K+ N +G D KG A G D+ S
Sbjct: 1920 TDTNSSKNENSNEWKKSKKASSKVDSSKRANPIDEIGQKDRQINKGNASN-QGGVEDMIS 1978
Query: 105 NSNTTIKRKQQRDAVDAILST 43
KRKQQR+AV AIL++
Sbjct: 1979 ------KRKQQREAVAAILNS 1993