BLASTX nr result

ID: Bupleurum21_contig00023170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023170
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG66730.2| pectate lyase [Carica papaya]                          254   4e-66
gb|ABG66729.2| pectate lyase [Carica papaya]                          254   4e-66
ref|XP_002521130.1| Pectate lyase precursor, putative [Ricinus c...   253   2e-65
ref|XP_004163042.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   252   2e-65
ref|XP_004152014.1| PREDICTED: probable pectate lyase 8-like [Cu...   252   2e-65

>gb|ABG66730.2| pectate lyase [Carica papaya]
          Length = 369

 Score =  254 bits (650), Expect = 4e-66
 Identities = 116/123 (94%), Positives = 121/123 (98%)
 Frame = +3

Query: 3   TMADGDAISIYGSSHVWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD 182
           TMADGD ISI+GSSH+WIDHNSLSNCADGLIDA+MGSTAIT+SNNYFTHHNEVMLLGHSD
Sbjct: 164 TMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMGSTAITVSNNYFTHHNEVMLLGHSD 223

Query: 183 SYWRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG 362
           SY RDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSA+PTINSQG
Sbjct: 224 SYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQG 283

Query: 363 NRY 371
           NRY
Sbjct: 284 NRY 286


>gb|ABG66729.2| pectate lyase [Carica papaya]
          Length = 385

 Score =  254 bits (650), Expect = 4e-66
 Identities = 116/123 (94%), Positives = 121/123 (98%)
 Frame = +3

Query: 3   TMADGDAISIYGSSHVWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD 182
           TMADGD ISI+GSSH+WIDHNSLSNCADGLIDA+MGSTAIT+SNNYFTHHNEVMLLGHSD
Sbjct: 180 TMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMGSTAITVSNNYFTHHNEVMLLGHSD 239

Query: 183 SYWRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG 362
           SY RDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSA+PTINSQG
Sbjct: 240 SYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQG 299

Query: 363 NRY 371
           NRY
Sbjct: 300 NRY 302


>ref|XP_002521130.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223539699|gb|EEF41281.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 441

 Score =  253 bits (645), Expect = 2e-65
 Identities = 116/123 (94%), Positives = 120/123 (97%)
 Frame = +3

Query: 3   TMADGDAISIYGSSHVWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD 182
           TMADGDAISI+GSSH+W+DHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD
Sbjct: 236 TMADGDAISIFGSSHIWVDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD 295

Query: 183 SYWRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG 362
           SY RDK+MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHW MYAIGGSA PTINSQG
Sbjct: 296 SYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQG 355

Query: 363 NRY 371
           NRY
Sbjct: 356 NRY 358


>ref|XP_004163042.1| PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 8-like
           [Cucumis sativus]
          Length = 392

 Score =  252 bits (644), Expect = 2e-65
 Identities = 116/123 (94%), Positives = 120/123 (97%)
 Frame = +3

Query: 3   TMADGDAISIYGSSHVWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD 182
           TMADGD ISI+GSSH+WIDHNSLS+CADGLIDA+MGSTAITISNNYFTHHNEVMLLGHSD
Sbjct: 187 TMADGDGISIFGSSHIWIDHNSLSSCADGLIDAVMGSTAITISNNYFTHHNEVMLLGHSD 246

Query: 183 SYWRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG 362
           SY RDK MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG
Sbjct: 247 SYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG 306

Query: 363 NRY 371
           NRY
Sbjct: 307 NRY 309


>ref|XP_004152014.1| PREDICTED: probable pectate lyase 8-like [Cucumis sativus]
          Length = 433

 Score =  252 bits (644), Expect = 2e-65
 Identities = 116/123 (94%), Positives = 120/123 (97%)
 Frame = +3

Query: 3   TMADGDAISIYGSSHVWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSD 182
           TMADGD ISI+GSSH+WIDHNSLS+CADGLIDA+MGSTAITISNNYFTHHNEVMLLGHSD
Sbjct: 228 TMADGDGISIFGSSHIWIDHNSLSSCADGLIDAVMGSTAITISNNYFTHHNEVMLLGHSD 287

Query: 183 SYWRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG 362
           SY RDK MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG
Sbjct: 288 SYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQG 347

Query: 363 NRY 371
           NRY
Sbjct: 348 NRY 350


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