BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023155
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   181   7e-44
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   178   5e-43
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   176   2e-42
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   166   2e-39
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   165   4e-39

>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  181 bits (458), Expect = 7e-44
 Identities = 81/156 (51%), Positives = 115/156 (73%)
 Frame = -3

Query: 474 DILRIQEAEGNSMYLGLPNIMGRNKNAVLGFVKDKLRRRIEAWDNKVLSRSGKEILLKTV 295
           +IL +        YLGL +++G++K  V GF++D+L RR++ W +K+LS++GK+IL+K V
Sbjct: 138 NILGVSTPLNTGRYLGLLSLIGKSKRVVFGFLRDRLWRRLQGWQSKLLSQAGKKILIKVV 197

Query: 294 AQALPSYAMSVFLLPDTMCTELERTMNKFWWQSSSKHGAKGIKWMSWERLSIHKQAGGMG 115
            QA+PSY MS FLLP ++  EL++ MN FWW   S  G + I W+SW++L + K+ GG+G
Sbjct: 198 GQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKS-DGGRRINWLSWDKLCLRKEEGGLG 256

Query: 114 FRNLRDFNLALLGKQAWRLITNVDSLVSRVFKARYY 7
           FRNLRDFNLA+LGKQ W LIT  DSL++R+ KARYY
Sbjct: 257 FRNLRDFNLAMLGKQGWNLITKPDSLIARLLKARYY 292


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  178 bits (451), Expect = 5e-43
 Identities = 75/147 (51%), Positives = 114/147 (77%)
 Frame = -3

Query: 447 GNSMYLGLPNIMGRNKNAVLGFVKDKLRRRIEAWDNKVLSRSGKEILLKTVAQALPSYAM 268
           G+  YLGLP+++GRNKNA+  ++KD++ ++ ++W  + LSR+ KE+L+K+VAQA+PSY M
Sbjct: 277 GSGKYLGLPSMVGRNKNAIFSYLKDRIWKKCQSWSVRSLSRADKEVLIKSVAQAIPSYCM 336

Query: 267 SVFLLPDTMCTELERTMNKFWWQSSSKHGAKGIKWMSWERLSIHKQAGGMGFRNLRDFNL 88
             FL+P ++C ELER MN F+W  S K+G +GI WM W+ L++HK  GG+GFRNL  FNL
Sbjct: 337 GAFLIPASLCEELERMMNSFYW-GSKKNGRRGINWMRWDFLTLHKSLGGLGFRNLEAFNL 395

Query: 87  ALLGKQAWRLITNVDSLVSRVFKARYY 7
           ++LGKQ W+L+++  SL +R+ KA+Y+
Sbjct: 396 SMLGKQGWKLLSDSSSLFTRILKAKYF 422


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  176 bits (445), Expect = 2e-42
 Identities = 76/156 (48%), Positives = 117/156 (75%)
 Frame = -3

Query: 474 DILRIQEAEGNSMYLGLPNIMGRNKNAVLGFVKDKLRRRIEAWDNKVLSRSGKEILLKTV 295
           ++L + E  G   YLGLP+++GR+K ++  ++KD++  RI    +K+LS++GKE+L+K+V
Sbjct: 329 NMLWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSV 388

Query: 294 AQALPSYAMSVFLLPDTMCTELERTMNKFWWQSSSKHGAKGIKWMSWERLSIHKQAGGMG 115
           AQA+PSY MSVFLLP ++  ++E+ +N FWW      G  GI+WMSWERL++ K+ GGMG
Sbjct: 389 AQAIPSYCMSVFLLPHSIADDIEKMLNSFWW-GMKNEGRGGIRWMSWERLTMRKEWGGMG 447

Query: 114 FRNLRDFNLALLGKQAWRLITNVDSLVSRVFKARYY 7
           FR++  F+LA+ GKQ W  +TN D++VSR+FKA+Y+
Sbjct: 448 FRHIHGFDLAMSGKQCWNFLTNPDAMVSRIFKAKYF 483


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/155 (48%), Positives = 111/155 (71%)
 Frame = -3

Query: 471 ILRIQEAEGNSMYLGLPNIMGRNKNAVLGFVKDKLRRRIEAWDNKVLSRSGKEILLKTVA 292
           IL+++E     +YLG+P ++G+NK  +  FV+ K+  RI+ W+ + LSR+GKEI LKTVA
Sbjct: 206 ILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVA 265

Query: 291 QALPSYAMSVFLLPDTMCTELERTMNKFWWQSSSKHGAKGIKWMSWERLSIHKQAGGMGF 112
           Q++P+Y M + LLP  +C ++E  MN F+W S+ +   + I+WMSW ++   K+ GG+GF
Sbjct: 266 QSIPTYVMQLLLLPKDLCRDIESMMNGFFWDSNPQ--CRSIRWMSWGKMCKQKKDGGLGF 323

Query: 111 RNLRDFNLALLGKQAWRLITNVDSLVSRVFKARYY 7
           R L DFNLALL KQ WR + N DSLV+R+F+ARY+
Sbjct: 324 RKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYF 358


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  165 bits (417), Expect = 4e-39
 Identities = 69/155 (44%), Positives = 113/155 (72%)
 Frame = -3

Query: 471 ILRIQEAEGNSMYLGLPNIMGRNKNAVLGFVKDKLRRRIEAWDNKVLSRSGKEILLKTVA 292
           I+ ++   G   YLGLP+++ R+K +V  F+KD + +RI  W  + LS++GKE+++K+V 
Sbjct: 126 IIGVRHVMGTGKYLGLPSMIDRDKWSVFSFIKDSIWKRINVWRGRALSKAGKEVMIKSVL 185

Query: 291 QALPSYAMSVFLLPDTMCTELERTMNKFWWQSSSKHGAKGIKWMSWERLSIHKQAGGMGF 112
           Q++PSY MS++LLP ++  ++E+ +N FWW   S +  +GIKWM+WE ++  K+ GGMGF
Sbjct: 186 QSIPSYIMSIYLLPSSVIDDIEKMVNAFWWGGRSNN--RGIKWMAWEHMACPKEFGGMGF 243

Query: 111 RNLRDFNLALLGKQAWRLITNVDSLVSRVFKARYY 7
           RN + FN+A++ KQ W L++  +SLV+RVFK+RY+
Sbjct: 244 RNFKAFNIAMVAKQGWSLLSTPESLVARVFKSRYF 278