BLASTX nr result

ID: Bupleurum21_contig00023148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023148
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersi...   318   4e-85
emb|CBI32873.3| unnamed protein product [Vitis vinifera]              302   3e-80
ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta...   302   3e-80
ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu...   289   2e-76
ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|2...   287   1e-75

>ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersicum]
           gi|115279797|gb|ABI85391.1| transcription factor IIIA
           [Solanum lycopersicum] gi|115279800|gb|ABI85393.1|
           transcription factor IIIA [Solanum lycopersicum]
          Length = 372

 Score =  318 bits (815), Expect = 4e-85
 Identities = 142/198 (71%), Positives = 161/198 (81%)
 Frame = -1

Query: 596 DHLNRHLLQHQGKLFKCPSSGCNRRFSIRGNITKHVKKFHDDSYPVEVGVQKQYICLEPG 417
           DHL+RHLL HQGKLF+CP  GC   FS +GN+T+HVK+ HD     EV + K+Y+C E G
Sbjct: 106 DHLSRHLLLHQGKLFECPVDGCKSTFSFQGNMTRHVKEMHDQPASAEVDLPKEYVCSEAG 165

Query: 416 CGKVFKYVSKLRKHEDSHVNLESTEAFCADPGCMKYFTNVKCLKAHIQSCHRHIICEICG 237
           CGKVFKY SKLRKHEDSHV LE+ EA C +PGCMK+FTN KCLK HI+SCH+HI CEICG
Sbjct: 166 CGKVFKYASKLRKHEDSHVKLETVEAMCLEPGCMKHFTNEKCLKEHIESCHQHIDCEICG 225

Query: 236 TKQLKKNIKRHLRTHEVKPPCERIKCSFDDCLHTFSTKSNLRQHIRAVHCDQKPFACSIH 57
           TKQLKKNIKRHLRTHE  P  ERIKC F DCLHTFS++SNL QHI+AVH   KPF+CSI 
Sbjct: 226 TKQLKKNIKRHLRTHEEGPISERIKCEFQDCLHTFSSRSNLAQHIKAVHVGSKPFSCSIS 285

Query: 56  GCGMKFAFKHVRDNHEKS 3
           GCGMKFAFKHVRD HE+S
Sbjct: 286 GCGMKFAFKHVRDKHEQS 303


>emb|CBI32873.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  302 bits (773), Expect = 3e-80
 Identities = 133/198 (67%), Positives = 156/198 (78%)
 Frame = -1

Query: 596 DHLNRHLLQHQGKLFKCPSSGCNRRFSIRGNITKHVKKFHDDSYPVEVGVQKQYICLEPG 417
           DHL RHLLQHQGKLF CP   C RRF+ +GN+ +H+K+FHD+  P      KQY+C E G
Sbjct: 125 DHLTRHLLQHQGKLFTCPVENCKRRFAFQGNMKRHIKEFHDEESPPNDVGSKQYVCPELG 184

Query: 416 CGKVFKYVSKLRKHEDSHVNLESTEAFCADPGCMKYFTNVKCLKAHIQSCHRHIICEICG 237
           CGKVFK+ SKL+KHEDSH  L+S EA C +P C+K+FTN +CLKAH+QSCH+HIICEICG
Sbjct: 185 CGKVFKFASKLQKHEDSHAKLDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICG 244

Query: 236 TKQLKKNIKRHLRTHEVKPPCERIKCSFDDCLHTFSTKSNLRQHIRAVHCDQKPFACSIH 57
           TKQLKKNIKRHLRTHE     ER+KC F  CLHTFSTKSNL QH++AVH   +PF C I 
Sbjct: 245 TKQLKKNIKRHLRTHESVCSSERVKCHFKGCLHTFSTKSNLDQHVKAVHLKLRPFVCGIP 304

Query: 56  GCGMKFAFKHVRDNHEKS 3
           GCGM+F FKHVRDNHEK+
Sbjct: 305 GCGMRFPFKHVRDNHEKT 322


>ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like
           [Vitis vinifera]
          Length = 370

 Score =  302 bits (773), Expect = 3e-80
 Identities = 133/198 (67%), Positives = 156/198 (78%)
 Frame = -1

Query: 596 DHLNRHLLQHQGKLFKCPSSGCNRRFSIRGNITKHVKKFHDDSYPVEVGVQKQYICLEPG 417
           DHL RHLLQHQGKLF CP   C RRF+ +GN+ +H+K+FHD+  P      KQY+C E G
Sbjct: 105 DHLTRHLLQHQGKLFTCPVENCKRRFAFQGNMKRHIKEFHDEESPPNDVGSKQYVCPELG 164

Query: 416 CGKVFKYVSKLRKHEDSHVNLESTEAFCADPGCMKYFTNVKCLKAHIQSCHRHIICEICG 237
           CGKVFK+ SKL+KHEDSH  L+S EA C +P C+K+FTN +CLKAH+QSCH+HIICEICG
Sbjct: 165 CGKVFKFASKLQKHEDSHAKLDSVEAVCLEPECLKHFTNEQCLKAHLQSCHQHIICEICG 224

Query: 236 TKQLKKNIKRHLRTHEVKPPCERIKCSFDDCLHTFSTKSNLRQHIRAVHCDQKPFACSIH 57
           TKQLKKNIKRHLRTHE     ER+KC F  CLHTFSTKSNL QH++AVH   +PF C I 
Sbjct: 225 TKQLKKNIKRHLRTHESVCSSERVKCHFKGCLHTFSTKSNLDQHVKAVHLKLRPFVCGIP 284

Query: 56  GCGMKFAFKHVRDNHEKS 3
           GCGM+F FKHVRDNHEK+
Sbjct: 285 GCGMRFPFKHVRDNHEKT 302


>ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis]
           gi|223526542|gb|EEF28801.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 367

 Score =  289 bits (740), Expect = 2e-76
 Identities = 129/199 (64%), Positives = 156/199 (78%), Gaps = 1/199 (0%)
 Frame = -1

Query: 596 DHLNRHLLQHQGKLFKCPSSGCNRRFSIRGNITKHVKKFHDDSYPVEVGVQKQYICLEPG 417
           DHLNRHLL H+GKLFKCP   C R F ++GN+ +HVK+ H +S P     +KQ++C E G
Sbjct: 107 DHLNRHLLIHKGKLFKCPIENCYREFVVQGNVKRHVKELHCESSPCAKIGEKQHVCQESG 166

Query: 416 CGKVFKYVSKLRKHEDSHVNLESTEAFCADPGCMKYFTNVKCLKAHIQSCHRHIICEICG 237
           CGKVF+Y+SKLRKHEDSHV L++ EA C + GCMK+F+N +CL+AHIQSCHR+  CEICG
Sbjct: 167 CGKVFRYLSKLRKHEDSHVKLDAVEAICLESGCMKHFSNSQCLRAHIQSCHRYTTCEICG 226

Query: 236 TKQLKKNIKRHLRTHEV-KPPCERIKCSFDDCLHTFSTKSNLRQHIRAVHCDQKPFACSI 60
           TKQLKKN+KRHLRTHE      ERIKC F DC HTFS K+NL QH++AVH + KPFAC I
Sbjct: 227 TKQLKKNLKRHLRTHESGGSSVERIKCQFKDCCHTFSNKTNLNQHVKAVHLEVKPFACGI 286

Query: 59  HGCGMKFAFKHVRDNHEKS 3
            GC  +F+FKHVRDNHEKS
Sbjct: 287 PGCDKRFSFKHVRDNHEKS 305


>ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|222835723|gb|EEE74158.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  287 bits (734), Expect = 1e-75
 Identities = 128/200 (64%), Positives = 155/200 (77%), Gaps = 2/200 (1%)
 Frame = -1

Query: 596 DHLNRHLLQHQGKLFKCPSSGCNRRFSIRGNITKHVKKFHDDSYP-VEVGVQKQYICLEP 420
           DHL RHLLQH+GKLFKC    CNR F    N+ +HV++ HD+S P    G +KQY+C EP
Sbjct: 93  DHLTRHLLQHEGKLFKCQIENCNREFVYPSNLKRHVRELHDESSPSCSFGGEKQYVCQEP 152

Query: 419 GCGKVFKYVSKLRKHEDSHVNLESTEAFCADPGCMKYFTNVKCLKAHIQSCHRHIICEIC 240
           GCGK F+Y SKLRKHEDSHV+L+  EA C +PGCMK+F+N +CLKAHIQS H++I C+IC
Sbjct: 153 GCGKAFRYPSKLRKHEDSHVSLDHVEAMCLEPGCMKHFSNKECLKAHIQSSHQYINCDIC 212

Query: 239 GTKQLKKNIKRHLRTHE-VKPPCERIKCSFDDCLHTFSTKSNLRQHIRAVHCDQKPFACS 63
           GTKQLKKNIKRHLRTHE      ERIKC F+ C HTFSTK+NL QH++AVH + +PF C 
Sbjct: 213 GTKQLKKNIKRHLRTHEPASDSTERIKCHFNGCQHTFSTKTNLNQHVKAVHLEHRPFLCG 272

Query: 62  IHGCGMKFAFKHVRDNHEKS 3
             GC M+F++KHVRDNHEKS
Sbjct: 273 FPGCDMRFSYKHVRDNHEKS 292


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