BLASTX nr result

ID: Bupleurum21_contig00023144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023144
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76389.1| hypothetical protein VITISV_023590 [Vitis vinifera]   116   2e-24
ref|XP_002278063.1| PREDICTED: transcription factor MYB39 [Vitis...   114   6e-24
ref|XP_002321627.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002511336.1| r2r3-myb transcription factor, putative [Ric...   110   2e-22
ref|XP_002318064.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21

>emb|CAN76389.1| hypothetical protein VITISV_023590 [Vitis vinifera]
          Length = 153

 Score =  116 bits (290), Expect = 2e-24
 Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
 Frame = -2

Query: 478 QTQTYYDHNQFEVKPNFGLSSMPNLTSYDFQSIAETEFSANSASTMSSLLFNEVKECXXX 299
           QT   +D NQ E   N G +S+P LT++D  ++ ET+FS NSAS M S  FNE KE    
Sbjct: 7   QTIRPFDQNQLEANSNVGFASLPGLTNFDHGNLTETDFSDNSASRMGSFFFNEAKESSSN 66

Query: 298 XSIVNSTANVGFELEKMVGNGTSTFSWDASNSFESLFQF--SAIKSEESMEPNQW---QV 134
            S + S    GF++  M  N    FSWDA N  E+LFQ+  S IKSEE ++P+ W   QV
Sbjct: 67  SSNITSHP-AGFQINNMGEN--VAFSWDAENKLEALFQYQISGIKSEE-LKPSSWYGDQV 122

Query: 133 QPHCSDDYISYPLVSLSEDLVGGNTEIFHQI 41
               S+D+ +YPL SLSEDL G + ++F Q+
Sbjct: 123 HSQNSEDFSNYPLTSLSEDLXGASFDVFQQM 153


>ref|XP_002278063.1| PREDICTED: transcription factor MYB39 [Vitis vinifera]
          Length = 367

 Score =  114 bits (286), Expect = 6e-24
 Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 5/151 (3%)
 Frame = -2

Query: 478 QTQTYYDHNQFEVKPNFGLSSMPNLTSYDFQSIAETEFSANSASTMSSLLFNEVKECXXX 299
           QT   +D NQ E   N G +S+P LT++D  ++ ET+FS NSAS M S  FNE KE    
Sbjct: 221 QTIRPFDQNQLEANSNVGFASLPGLTNFDQGNLTETDFSDNSASRMGSFFFNEAKESSSN 280

Query: 298 XSIVNSTANVGFELEKMVGNGTSTFSWDASNSFESLFQF--SAIKSEESMEPNQW---QV 134
            S + S    GF++  M  N    FSWDA N  E+LFQ+  S IKSEE ++P+ W   QV
Sbjct: 281 SSNITSHP-AGFQINNMGEN--VAFSWDAENKLEALFQYQISGIKSEE-LKPSSWYGDQV 336

Query: 133 QPHCSDDYISYPLVSLSEDLVGGNTEIFHQI 41
               S+D+ +YPL SLSEDL G + ++F Q+
Sbjct: 337 HSQNSEDFSNYPLTSLSEDLNGASFDVFQQM 367


>ref|XP_002321627.1| predicted protein [Populus trichocarpa] gi|222868623|gb|EEF05754.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  113 bits (283), Expect = 1e-23
 Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
 Frame = -2

Query: 460 DHNQFEVKPNFGLSSMPNLTSYDFQSIAETEFSANSASTMSSLLFNEVKECXXXXSIVNS 281
           D NQFE   NFG +SMP+LTS+D  S++ T+FS NSAS MSS+  NE KE     S +++
Sbjct: 226 DQNQFETSSNFGFTSMPSLTSFDHGSMSGTDFSDNSASRMSSMFLNEAKESSSNSSNISN 285

Query: 280 TANVGFELEKMVGNGTSTFSWDA-SNSFESLFQF---SAIKSEESMEPNQW----QVQPH 125
            A  G+++  MV N  +  SWD+  +  ES+FQ+   + +K+EE ++P+ W    ++  H
Sbjct: 286 YA--GYQMNNMVENAAAFSSWDSDDHKLESVFQYHQVNGVKTEE-LKPSPWHEAGRLHTH 342

Query: 124 -CSDDYISYPLVSLSEDLVGGNTEIFHQI 41
             S D+ SYPL SLSED+ G N ++FHQI
Sbjct: 343 QNSVDFNSYPLTSLSEDITGANFDVFHQI 371


>ref|XP_002511336.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223550451|gb|EEF51938.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 378

 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/144 (44%), Positives = 89/144 (61%), Gaps = 3/144 (2%)
 Frame = -2

Query: 463 YDHNQFEVKPNFGLSSMPNLTSYDFQSIAETEFSANSASTMSSLLFN-EVKECXXXXSIV 287
           +D NQFE   NF  +SMP+L S+D  SI+ T+FS +SAS +SS+  N + KE     S  
Sbjct: 239 FDQNQFETSSNFAFTSMPSLASFDHGSISATDFSDSSASRLSSMFLNDQAKESSSNSS-- 296

Query: 286 NSTANVGFELEKMVGNGTSTFSWDASNSFESLFQF--SAIKSEESMEPNQWQVQPHCSDD 113
           N +   G+ + KMV    + FSWD  N F+++FQF  + IK+EE  + ++   Q   S D
Sbjct: 297 NISNYTGYHINKMV-EDNAAFSWDTDNKFDAMFQFPVNGIKTEELRQSSRQDTQH--SVD 353

Query: 112 YISYPLVSLSEDLVGGNTEIFHQI 41
           + SYPL SLSEDL G N ++FHQI
Sbjct: 354 FSSYPLTSLSEDLTGANFDVFHQI 377


>ref|XP_002318064.1| predicted protein [Populus trichocarpa] gi|222858737|gb|EEE96284.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  107 bits (266), Expect = 1e-21
 Identities = 66/148 (44%), Positives = 91/148 (61%), Gaps = 8/148 (5%)
 Frame = -2

Query: 460 DHNQFEVKPNFGLSSMPNLTSYDFQSIAETEFSANSASTMSSLLFNEVKECXXXXSIVNS 281
           D NQFE   NF  +SMP+LTS+D  S++ T+FS NSAS MSS+  NE KE     S +++
Sbjct: 226 DQNQFETSSNFVFTSMPSLTSFDHGSMSGTDFSDNSASRMSSMFLNEAKESSSNSSNISN 285

Query: 280 TANVGFELEKMVGNGTSTFSWDASNSFESLFQF---SAIKSEESMEPNQW----QVQPH- 125
            A  G+++  MV N     SWD+ +  ES+FQ+   + IK+ E ++P+ W    Q+  H 
Sbjct: 286 YA--GYQMSNMVENAAGFSSWDSDDKLESVFQYHQVNGIKTGE-LKPSPWHDAGQLHTHQ 342

Query: 124 CSDDYISYPLVSLSEDLVGGNTEIFHQI 41
            S D+ S PL SLSEDL G N + FHQI
Sbjct: 343 NSVDFSSCPLKSLSEDLKGANFDGFHQI 370


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