BLASTX nr result

ID: Bupleurum21_contig00023127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023127
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACI13681.1| putative auxin response factor ARF16 [Malus x dom...   107   1e-21
ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Gl...    91   1e-16
ref|XP_002519531.1| Auxin response factor, putative [Ricinus com...    88   8e-16
ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cu...    86   2e-15
ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cu...    86   2e-15

>gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  107 bits (267), Expect = 1e-21
 Identities = 60/153 (39%), Positives = 79/153 (51%)
 Frame = +2

Query: 2   GMQGARHTQYGFPVPDIHLRKLQSGLFPPGISPFGLGSIQTRPXXXXXXXXXXXXXXXXX 181
           GMQGARH  YG  + D+HL KL +GLFP G  P    +  ++                  
Sbjct: 454 GMQGARHAHYGLSLSDMHLNKLHTGLFPAGFPPLDHAAAPSKFSNNTMIQKPTMSENLSC 513

Query: 182 XXXXGNSAHTAKKVDDQKPQQFLLFGQPILTKQHITLSSSDFTVLPVHAGNTPSGGNVEN 361
                +S  T+KK DD KP Q +LFGQPILT+Q I+LSSS  TV PV  GN+ S GN + 
Sbjct: 514 LLTMSHSTQTSKKPDDVKPPQLILFGQPILTEQQISLSSSGDTVSPVLTGNSSSDGNADK 573

Query: 362 VTHLSDGDASPSCSGFAVKRHATSCDGLLQYKE 460
           + + SD   S         +  +SC+G   YK+
Sbjct: 574 MANHSDNSGSALQQSI---QERSSCEGFQWYKD 603


>ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/130 (40%), Positives = 65/130 (50%)
 Frame = +2

Query: 2   GMQGARHTQYGFPVPDIHLRKLQSGLFPPGISPFGLGSIQTRPXXXXXXXXXXXXXXXXX 181
           GMQGARH  YG  + D+HL KLQSGLF  G       +   R                  
Sbjct: 453 GMQGARHAHYGLSLSDLHLSKLQSGLFSTGFPSLDHAATPMRVSNSITLQKPNLSENVSC 512

Query: 182 XXXXGNSAHTAKKVDDQKPQQFLLFGQPILTKQHITLSSSDFTVLPVHAGNTPSGGNVEN 361
                NS  ++KK+D  K    +LFGQ ILT+Q I+ SSS  T+ PV   N  S GNV+ 
Sbjct: 513 LLTMANSTQSSKKLDVGKTPSLVLFGQKILTEQQISPSSSGDTLSPVLTRNCSSDGNVDK 572

Query: 362 VTHLSDGDAS 391
           VT+ SDG  S
Sbjct: 573 VTNFSDGSGS 582


>ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
           gi|223541394|gb|EEF42945.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 702

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/131 (38%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
 Frame = +2

Query: 2   GMQGARHTQYGFPVPDIHLRKLQSGLFPPGISP-FGLGSIQTRPXXXXXXXXXXXXXXXX 178
           GMQGARH  YG P+ D+ L KLQ+ LF  G  P     +  +                  
Sbjct: 454 GMQGARHAHYGLPLSDLRLNKLQTSLFLAGFPPPLDHSATHSISSNGPTIVKPSMSESVS 513

Query: 179 XXXXXGNSAHTAKKVDDQKPQQFLLFGQPILTKQHITLSSSDFTVLPVHAGNTPSGGNVE 358
                  S   + K D+ K  Q +LFGQPILT+Q I+LSSS  TV PV  GN+ S GN++
Sbjct: 514 CVLTMARSTQNSGKPDNVKTPQLVLFGQPILTEQQISLSSSGDTVSPVLTGNSSSEGNLD 573

Query: 359 NVTHLSDGDAS 391
            + + SDG  S
Sbjct: 574 KIANFSDGSGS 584


>ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 701

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/130 (38%), Positives = 65/130 (50%)
 Frame = +2

Query: 2   GMQGARHTQYGFPVPDIHLRKLQSGLFPPGISPFGLGSIQTRPXXXXXXXXXXXXXXXXX 181
           GMQGARH  +G  + D H+ KLQSGLF  G       +  TR                  
Sbjct: 451 GMQGARHAHFGLSLSDFHVSKLQSGLFSIGYRSLDPAAGSTRLSGNVMTEKPSMSENVSC 510

Query: 182 XXXXGNSAHTAKKVDDQKPQQFLLFGQPILTKQHITLSSSDFTVLPVHAGNTPSGGNVEN 361
                +S   +KK D  K  Q +LFG+PILT+  ++ S S  TV PV  GN+ S GN + 
Sbjct: 511 LLTMAHSTQASKKFDGVKTPQLILFGRPILTELQMSQSFSGDTVSPVGTGNSSSDGNGDK 570

Query: 362 VTHLSDGDAS 391
           +T+LSDG  S
Sbjct: 571 MTNLSDGSGS 580


>ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/130 (38%), Positives = 65/130 (50%)
 Frame = +2

Query: 2   GMQGARHTQYGFPVPDIHLRKLQSGLFPPGISPFGLGSIQTRPXXXXXXXXXXXXXXXXX 181
           GMQGARH  +G  + D H+ KLQSGLF  G       +  TR                  
Sbjct: 451 GMQGARHAHFGLSLSDFHVSKLQSGLFSIGYRSLDPAAGSTRLSGNVMTEKPSMSENVSC 510

Query: 182 XXXXGNSAHTAKKVDDQKPQQFLLFGQPILTKQHITLSSSDFTVLPVHAGNTPSGGNVEN 361
                +S   +KK D  K  Q +LFG+PILT+  ++ S S  TV PV  GN+ S GN + 
Sbjct: 511 LLTMAHSTQASKKFDGVKTPQLILFGRPILTELQMSQSFSGDTVSPVGTGNSSSDGNGDK 570

Query: 362 VTHLSDGDAS 391
           +T+LSDG  S
Sbjct: 571 MTNLSDGSGS 580


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