BLASTX nr result

ID: Bupleurum21_contig00023117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023117
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   171   8e-41
ref|XP_002524226.1| Eukaryotic translation initiation factor 3 R...   170   1e-40
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   168   4e-40
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...   167   8e-40
ref|XP_003552007.1| PREDICTED: eukaryotic translation initiation...   166   2e-39

>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score =  171 bits (432), Expect = 8e-41
 Identities = 82/94 (87%), Positives = 91/94 (96%)
 Frame = +1

Query: 1   FLLPPRQVIGPDENGIKKVIEYKFNNDGNKIKITTTSRVRKLAKARLSKGAVERRSWPKF 180
           FLLPP+QVIGPD+NGIKKVIEYKFN+DGNKIKITTT+RVRKLAKARLSK AVERR+WPKF
Sbjct: 27  FLLPPKQVIGPDDNGIKKVIEYKFNDDGNKIKITTTTRVRKLAKARLSKRAVERRNWPKF 86

Query: 181 GDAVHEEVGARLTMVSTEEIVLERPRPPGSKQDE 282
           GDAVHE+VG+RLTMVSTEEI+LERPR PG+K DE
Sbjct: 87  GDAVHEDVGSRLTMVSTEEILLERPRAPGTKADE 120


>ref|XP_002524226.1| Eukaryotic translation initiation factor 3 RNA-binding subunit,
           putative [Ricinus communis] gi|223536503|gb|EEF38150.1|
           Eukaryotic translation initiation factor 3 RNA-binding
           subunit, putative [Ricinus communis]
          Length = 221

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/94 (85%), Positives = 91/94 (96%)
 Frame = +1

Query: 1   FLLPPRQVIGPDENGIKKVIEYKFNNDGNKIKITTTSRVRKLAKARLSKGAVERRSWPKF 180
           FLLPP+QVIGPD+NGIK+VIEYKFN+DGNKIKITTT+RVRKLAKARLSK A+ERR+WPKF
Sbjct: 24  FLLPPKQVIGPDDNGIKRVIEYKFNDDGNKIKITTTTRVRKLAKARLSKSAIERRNWPKF 83

Query: 181 GDAVHEEVGARLTMVSTEEIVLERPRPPGSKQDE 282
           GDAVHE+VGARLTMVSTEEI+LERPR PG+K +E
Sbjct: 84  GDAVHEDVGARLTMVSTEEILLERPRAPGTKMEE 117


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/94 (85%), Positives = 90/94 (95%)
 Frame = +1

Query: 1   FLLPPRQVIGPDENGIKKVIEYKFNNDGNKIKITTTSRVRKLAKARLSKGAVERRSWPKF 180
           FLLPPRQVIGPD+NGIKKVIEYKFN+DGNK+KITTT+R+RKLAKARLSK A+ERRSW KF
Sbjct: 31  FLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKLAKARLSKRAIERRSWAKF 90

Query: 181 GDAVHEEVGARLTMVSTEEIVLERPRPPGSKQDE 282
           GDAVHE+VG+RLTMVSTEEI+LERPR PGSK +E
Sbjct: 91  GDAVHEDVGSRLTMVSTEEILLERPRAPGSKAEE 124


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 301

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/94 (86%), Positives = 89/94 (94%)
 Frame = +1

Query: 1   FLLPPRQVIGPDENGIKKVIEYKFNNDGNKIKITTTSRVRKLAKARLSKGAVERRSWPKF 180
           FLLPPRQVIGP+ENGIKKVIEYKFN DGNK+KITTT+RVRKLAKARLSK AVERRSW KF
Sbjct: 36  FLLPPRQVIGPEENGIKKVIEYKFNEDGNKVKITTTTRVRKLAKARLSKRAVERRSWAKF 95

Query: 181 GDAVHEEVGARLTMVSTEEIVLERPRPPGSKQDE 282
           GDAVHE+VG+RLTMVSTEEI+LERPR PG+K +E
Sbjct: 96  GDAVHEDVGSRLTMVSTEEILLERPRAPGTKAEE 129


>ref|XP_003552007.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           G-like [Glycine max]
          Length = 290

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/94 (85%), Positives = 88/94 (93%)
 Frame = +1

Query: 1   FLLPPRQVIGPDENGIKKVIEYKFNNDGNKIKITTTSRVRKLAKARLSKGAVERRSWPKF 180
           FLLPPRQVIGPDENGIKKVIEYKF+ DGNK+KITTT+R RKLA ARLSK AVERRSWPKF
Sbjct: 25  FLLPPRQVIGPDENGIKKVIEYKFDEDGNKVKITTTTRTRKLANARLSKRAVERRSWPKF 84

Query: 181 GDAVHEEVGARLTMVSTEEIVLERPRPPGSKQDE 282
           GDAVHE+VGARLTMVSTEEI+LERP+P G+K +E
Sbjct: 85  GDAVHEDVGARLTMVSTEEILLERPKPLGAKSEE 118


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