BLASTX nr result

ID: Bupleurum21_contig00023110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023110
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange f...   182   2e-44
emb|CBI31584.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002524258.1| Rop guanine nucleotide exchange factor, puta...   174   7e-42
ref|XP_002534083.1| Rop guanine nucleotide exchange factor, puta...   172   2e-41
ref|XP_003545244.1| PREDICTED: LOW QUALITY PROTEIN: rop guanine ...   172   3e-41

>ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis
           vinifera]
          Length = 571

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/125 (73%), Positives = 106/125 (84%)
 Frame = -2

Query: 376 QLQNCSDTDVLGDENKTRLGDSNVKKQNMISPLAEMEMMKERFAKLLLGEDMSGSGKGVC 197
           +++  S +DV  DE K+ L DS VK+    S ++E+EMMKERF+KLLLGEDMSGSGKGVC
Sbjct: 68  EVRKSSVSDVSEDETKSHLNDSKVKQLG--SKVSEIEMMKERFSKLLLGEDMSGSGKGVC 125

Query: 196 TALAISNAITNLCATIFGQLWRLEPLSSEKKAMWQREMDCLLSVSDHIVELIPSWQTFSD 17
           TALAISNAITNLCATIFGQLWRLEPL  EKK+MW+REM+ LL VSDHIV+LIPSWQTF D
Sbjct: 126 TALAISNAITNLCATIFGQLWRLEPLPPEKKSMWRREMELLLCVSDHIVQLIPSWQTFPD 185

Query: 16  GSKLE 2
           GSKLE
Sbjct: 186 GSKLE 190


>emb|CBI31584.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/125 (73%), Positives = 106/125 (84%)
 Frame = -2

Query: 376 QLQNCSDTDVLGDENKTRLGDSNVKKQNMISPLAEMEMMKERFAKLLLGEDMSGSGKGVC 197
           +++  S +DV  DE K+ L DS VK+    S ++E+EMMKERF+KLLLGEDMSGSGKGVC
Sbjct: 68  EVRKSSVSDVSEDETKSHLNDSKVKQLG--SKVSEIEMMKERFSKLLLGEDMSGSGKGVC 125

Query: 196 TALAISNAITNLCATIFGQLWRLEPLSSEKKAMWQREMDCLLSVSDHIVELIPSWQTFSD 17
           TALAISNAITNLCATIFGQLWRLEPL  EKK+MW+REM+ LL VSDHIV+LIPSWQTF D
Sbjct: 126 TALAISNAITNLCATIFGQLWRLEPLPPEKKSMWRREMELLLCVSDHIVQLIPSWQTFPD 185

Query: 16  GSKLE 2
           GSKLE
Sbjct: 186 GSKLE 190


>ref|XP_002524258.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223536535|gb|EEF38182.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 590

 Score =  174 bits (441), Expect = 7e-42
 Identities = 88/116 (75%), Positives = 100/116 (86%), Gaps = 2/116 (1%)
 Frame = -2

Query: 343 GDENK--TRLGDSNVKKQNMISPLAEMEMMKERFAKLLLGEDMSGSGKGVCTALAISNAI 170
           G+ENK  T L DS  K+  + + ++E++MMKERFAKLLLGEDMSGSGKGVCTALAISNAI
Sbjct: 92  GNENKDSTHLDDSKFKQ--LSTKISEIDMMKERFAKLLLGEDMSGSGKGVCTALAISNAI 149

Query: 169 TNLCATIFGQLWRLEPLSSEKKAMWQREMDCLLSVSDHIVELIPSWQTFSDGSKLE 2
           TNLC T+FGQLWRLEPL SEKK+MW+REM+ LL V DHIVELIPSWQTF DGSKLE
Sbjct: 150 TNLCVTVFGQLWRLEPLPSEKKSMWRREMEWLLCVGDHIVELIPSWQTFPDGSKLE 205


>ref|XP_002534083.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223525876|gb|EEF28299.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 673

 Score =  172 bits (437), Expect = 2e-41
 Identities = 88/126 (69%), Positives = 102/126 (80%), Gaps = 1/126 (0%)
 Frame = -2

Query: 376 QLQNCSDTD-VLGDENKTRLGDSNVKKQNMISPLAEMEMMKERFAKLLLGEDMSGSGKGV 200
           ++ +C+ T+ V  D  K  L D  ++KQ   S ++E+EMMKERF+KLLLGEDMSG G GV
Sbjct: 180 EVHDCASTNGVCDDGKKLHLVDRKLEKQ--ASSISEIEMMKERFSKLLLGEDMSGCGNGV 237

Query: 199 CTALAISNAITNLCATIFGQLWRLEPLSSEKKAMWQREMDCLLSVSDHIVELIPSWQTFS 20
           CTALAISNAITNLCAT+FGQLWRLEPL  EKKAMW+REM+  L VSDHIVELIPSWQTF 
Sbjct: 238 CTALAISNAITNLCATLFGQLWRLEPLPPEKKAMWRREMEWFLCVSDHIVELIPSWQTFP 297

Query: 19  DGSKLE 2
           DGSKLE
Sbjct: 298 DGSKLE 303


>ref|XP_003545244.1| PREDICTED: LOW QUALITY PROTEIN: rop guanine nucleotide exchange
           factor 1-like [Glycine max]
          Length = 565

 Score =  172 bits (436), Expect = 3e-41
 Identities = 87/124 (70%), Positives = 100/124 (80%)
 Frame = -2

Query: 373 LQNCSDTDVLGDENKTRLGDSNVKKQNMISPLAEMEMMKERFAKLLLGEDMSGSGKGVCT 194
           L  C  +D   +E  + L DS  K   + S ++ ++ MKERFAKLLLGEDMSGSGKGVC+
Sbjct: 46  LSKCRKSDEKENEPVSHLEDS--KFTTVSSKMSGIDAMKERFAKLLLGEDMSGSGKGVCS 103

Query: 193 ALAISNAITNLCATIFGQLWRLEPLSSEKKAMWQREMDCLLSVSDHIVELIPSWQTFSDG 14
           ALAISNAITNLCAT+FGQLWRLEP+  EKK MW+REM+CLLSVSDHIVELIPSWQTF DG
Sbjct: 104 ALAISNAITNLCATVFGQLWRLEPIPCEKKEMWRREMECLLSVSDHIVELIPSWQTFPDG 163

Query: 13  SKLE 2
           SKLE
Sbjct: 164 SKLE 167


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