BLASTX nr result
ID: Bupleurum21_contig00023091
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00023091 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003777772.1| PREDICTED: uncharacterized protein LOC100939... 62 5e-08 gb|EFB13229.1| hypothetical protein PANDA_009536 [Ailuropoda mel... 57 2e-06 ref|XP_003777356.1| PREDICTED: uncharacterized protein LOC100938... 56 4e-06 gb|EDL79735.1| similar to FLJ46154 protein (predicted) [Rattus n... 55 6e-06 >ref|XP_003777772.1| PREDICTED: uncharacterized protein LOC100939189, partial [Pongo abelii] Length = 844 Score = 62.0 bits (149), Expect = 5e-08 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 7/148 (4%) Frame = +2 Query: 2 VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTC--LCSSECVCLY-----*LC 160 VC +C+C+C Y+C + Y V VCV +CVY+C C +C CVC+Y +C Sbjct: 85 VCICVCICICVCVYVCVCVSVYVCVCVCVYVCICVYVCACVYVCVCACVCVYVCVCVYVC 144 Query: 161 VYVXXXXXXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FC 340 VYV C+ V + V Y + + I V+ Sbjct: 145 VYVCVCVYVCIYVCVCLCICVCV-------CVCVCVYVCVYVCICVCACVCICVYVC--V 195 Query: 341 WVCLLICAC*FTYYNVNCLNVFVCIICC 424 +VC+ +C C + Y + C+ V VC+ C Sbjct: 196 YVCICVCVCVYVYVCI-CVCVCVCVYVC 222 Score = 59.3 bits (142), Expect = 3e-07 Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 1/142 (0%) Frame = +2 Query: 2 VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY*LCVYVXXXX 181 VC +VC+C+C Y+C V +CV +CVY+C C+C C+C+ +CVYV Sbjct: 51 VCVCVYVCICVCVYVC------VCVCICVCVYVCVYVCICVCICVCICIC-VCVYVCVCV 103 Query: 182 XXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FCWVCLLIC 361 CI V Y+ + V+ +VC+ +C Sbjct: 104 SVYVCVCVCVYVCICVYVCACVYVC---------------VCACVCVYVCVCVYVCVYVC 148 Query: 362 AC*FT-YYNVNCLNVFVCIICC 424 C + Y CL + VC+ C Sbjct: 149 VCVYVCIYVCVCLCICVCVCVC 170 Score = 58.5 bits (140), Expect = 5e-07 Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 5/141 (3%) Frame = +2 Query: 17 WVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY*-----LCVYVXXXX 181 +VC+C+C +C + V VCV +CVY+C C+C VC+Y +CVYV Sbjct: 196 YVCICVC--VCVYVYVCICVCVCVCVYVCVYVCICICVCVYVCVYVCVYVCICVYVCVCA 253 Query: 182 XXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FCWVCLLIC 361 C+YV Y+ +Y + I + V+ F VC+ +C Sbjct: 254 CVCICICVCVCVCVYVCACVCVYVC------VYV---CICVCICVCVYVCIFICVCVYVC 304 Query: 362 AC*FTYYNVNCLNVFVCIICC 424 C + V C+ V VC+ C Sbjct: 305 VCVYVCVYV-CICVCVCVYVC 324 Score = 56.2 bits (134), Expect = 3e-06 Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 4/145 (2%) Frame = +2 Query: 2 VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY---*LCVYVX 172 VC +C+C+C +C + Y + VC +CVY+C +C CVC+Y +CV V Sbjct: 157 VCVCLCICVCVCVCVCVYVCVYVCICVCACVCICVYVCVYVCICVCVCVYVYVCICVCVC 216 Query: 173 XXXXXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FCWVCL 352 C+YV + V Y + I V+ VC+ Sbjct: 217 VCVYVCVYVCICICVCVYV-------CVYVCVY------------VCICVYVCVCACVCI 257 Query: 353 LICAC-*FTYYNVNCLNVFVCIICC 424 IC C Y C+ V+VC+ C Sbjct: 258 CICVCVCVCVYVCACVCVYVCVYVC 282 >gb|EFB13229.1| hypothetical protein PANDA_009536 [Ailuropoda melanoleuca] Length = 121 Score = 56.6 bits (135), Expect = 2e-06 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Frame = +2 Query: 2 VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY-----*LCVY 166 +C +VC+C+C Y+C M Y V VCV +CVYMC +C C+C+Y +CVY Sbjct: 39 ICVYMYVCICMCVYVC--MYMYVCVYVCVYIYVCVYMCVYVCVCICMCVYMYVCVYVCVY 96 Query: 167 VXXXXXXXXXXXXXXXXCIYV 229 + CIYV Sbjct: 97 IYVCVYMCVYVCVCICMCIYV 117 >ref|XP_003777356.1| PREDICTED: uncharacterized protein LOC100938603 [Pongo abelii] Length = 238 Score = 55.8 bits (133), Expect = 4e-06 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 10/148 (6%) Frame = +2 Query: 2 VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY---*LCVYVX 172 VC +VC+C+ ++C M Y + +CV ++CVY+C CVC+Y +CVY+ Sbjct: 61 VCIYIYVCICVYIHICVYMCVYTYMCICVYIHICVYVCVYTYMCVCVCIYIYVYMCVYIH 120 Query: 173 XXXXXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FCWVC- 349 CIY+ Y+ + I I V+ + ++C Sbjct: 121 ICVYMCVYTYMCVYVCIYI------YV-------------CICVYIHICVYVCIYTYMCI 161 Query: 350 -----LLICAC*FTYYNVN-CLNVFVCI 415 + +C C +TY V C+ ++VCI Sbjct: 162 CVCIYIYVCMCVYTYMCVYVCIYIYVCI 189 >gb|EDL79735.1| similar to FLJ46154 protein (predicted) [Rattus norvegicus] Length = 374 Score = 55.1 bits (131), Expect = 6e-06 Identities = 24/56 (42%), Positives = 34/56 (60%) Frame = +2 Query: 2 VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY*LCVYV 169 VC +VC+C+C Y+C +R VCV +CVY+C C+C CVC +CVY+ Sbjct: 54 VCVSVYVCVCVCVYICVYVR------VCVCVCICVYVCVCVCMCVCVC---MCVYI 100