BLASTX nr result

ID: Bupleurum21_contig00023091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023091
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003777772.1| PREDICTED: uncharacterized protein LOC100939...    62   5e-08
gb|EFB13229.1| hypothetical protein PANDA_009536 [Ailuropoda mel...    57   2e-06
ref|XP_003777356.1| PREDICTED: uncharacterized protein LOC100938...    56   4e-06
gb|EDL79735.1| similar to FLJ46154 protein (predicted) [Rattus n...    55   6e-06

>ref|XP_003777772.1| PREDICTED: uncharacterized protein LOC100939189, partial [Pongo
           abelii]
          Length = 844

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
 Frame = +2

Query: 2   VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTC--LCSSECVCLY-----*LC 160
           VC    +C+C+C Y+C  +  Y  V VCV   +CVY+C C  +C   CVC+Y      +C
Sbjct: 85  VCICVCICICVCVYVCVCVSVYVCVCVCVYVCICVYVCACVYVCVCACVCVYVCVCVYVC 144

Query: 161 VYVXXXXXXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FC 340
           VYV                C+ V        + V  Y        +   + I V+     
Sbjct: 145 VYVCVCVYVCIYVCVCLCICVCV-------CVCVCVYVCVYVCICVCACVCICVYVC--V 195

Query: 341 WVCLLICAC*FTYYNVNCLNVFVCIICC 424
           +VC+ +C C + Y  + C+ V VC+  C
Sbjct: 196 YVCICVCVCVYVYVCI-CVCVCVCVYVC 222



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY*LCVYVXXXX 181
           VC   +VC+C+C Y+C        V +CV   +CVY+C C+C   C+C+  +CVYV    
Sbjct: 51  VCVCVYVCICVCVYVC------VCVCICVCVYVCVYVCICVCICVCICIC-VCVYVCVCV 103

Query: 182 XXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FCWVCLLIC 361
                       CI V      Y+                    + V+     +VC+ +C
Sbjct: 104 SVYVCVCVCVYVCICVYVCACVYVC---------------VCACVCVYVCVCVYVCVYVC 148

Query: 362 AC*FT-YYNVNCLNVFVCIICC 424
            C +   Y   CL + VC+  C
Sbjct: 149 VCVYVCIYVCVCLCICVCVCVC 170



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
 Frame = +2

Query: 17  WVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY*-----LCVYVXXXX 181
           +VC+C+C  +C  +     V VCV   +CVY+C C+C    VC+Y      +CVYV    
Sbjct: 196 YVCICVC--VCVYVYVCICVCVCVCVYVCVYVCICICVCVYVCVYVCVYVCICVYVCVCA 253

Query: 182 XXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FCWVCLLIC 361
                       C+YV      Y+       +Y     +   I + V+   F  VC+ +C
Sbjct: 254 CVCICICVCVCVCVYVCACVCVYVC------VYV---CICVCICVCVYVCIFICVCVYVC 304

Query: 362 AC*FTYYNVNCLNVFVCIICC 424
            C +    V C+ V VC+  C
Sbjct: 305 VCVYVCVYV-CICVCVCVYVC 324



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
 Frame = +2

Query: 2   VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY---*LCVYVX 172
           VC    +C+C+C  +C  +  Y  + VC    +CVY+C  +C   CVC+Y    +CV V 
Sbjct: 157 VCVCLCICVCVCVCVCVYVCVYVCICVCACVCICVYVCVYVCICVCVCVYVYVCICVCVC 216

Query: 173 XXXXXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FCWVCL 352
                          C+YV        + V  Y            + I V+      VC+
Sbjct: 217 VCVYVCVYVCICICVCVYV-------CVYVCVY------------VCICVYVCVCACVCI 257

Query: 353 LICAC-*FTYYNVNCLNVFVCIICC 424
            IC C     Y   C+ V+VC+  C
Sbjct: 258 CICVCVCVCVYVCACVCVYVCVYVC 282


>gb|EFB13229.1| hypothetical protein PANDA_009536 [Ailuropoda melanoleuca]
          Length = 121

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
 Frame = +2

Query: 2   VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY-----*LCVY 166
           +C   +VC+C+C Y+C  M  Y  V VCV   +CVYMC  +C   C+C+Y      +CVY
Sbjct: 39  ICVYMYVCICMCVYVC--MYMYVCVYVCVYIYVCVYMCVYVCVCICMCVYMYVCVYVCVY 96

Query: 167 VXXXXXXXXXXXXXXXXCIYV 229
           +                CIYV
Sbjct: 97  IYVCVYMCVYVCVCICMCIYV 117


>ref|XP_003777356.1| PREDICTED: uncharacterized protein LOC100938603 [Pongo abelii]
          Length = 238

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
 Frame = +2

Query: 2   VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY---*LCVYVX 172
           VC   +VC+C+  ++C  M  Y  + +CV  ++CVY+C       CVC+Y    +CVY+ 
Sbjct: 61  VCIYIYVCICVYIHICVYMCVYTYMCICVYIHICVYVCVYTYMCVCVCIYIYVYMCVYIH 120

Query: 173 XXXXXXXXXXXXXXXCIYVGGI*RSYII*V*EYKMYKR*NIL*QSISISVFNT*FCWVC- 349
                          CIY+      Y+              +   I I V+   + ++C 
Sbjct: 121 ICVYMCVYTYMCVYVCIYI------YV-------------CICVYIHICVYVCIYTYMCI 161

Query: 350 -----LLICAC*FTYYNVN-CLNVFVCI 415
                + +C C +TY  V  C+ ++VCI
Sbjct: 162 CVCIYIYVCMCVYTYMCVYVCIYIYVCI 189


>gb|EDL79735.1| similar to FLJ46154 protein (predicted) [Rattus norvegicus]
          Length = 374

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = +2

Query: 2   VCGVEWVCLCIC*YMCGVMRAYFIV*VCVLGNLCVYMCTCLCSSECVCLY*LCVYV 169
           VC   +VC+C+C Y+C  +R      VCV   +CVY+C C+C   CVC   +CVY+
Sbjct: 54  VCVSVYVCVCVCVYICVYVR------VCVCVCICVYVCVCVCMCVCVC---MCVYI 100


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