BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023082
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containi...   214   9e-54
emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]   206   2e-51
ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|2...   192   4e-47
ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containi...   166   3e-39
ref|XP_002525134.1| pentatricopeptide repeat-containing protein,...   161   1e-37

>ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score =  214 bits (546), Expect = 9e-54
 Identities = 104/192 (54%), Positives = 141/192 (73%), Gaps = 3/192 (1%)
 Frame = +1

Query: 1   LGCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQ 180
           L  +G NGC+DE +  F++MP KNLVTWN++I+LFG+  F +E + +FRELMR    LS+
Sbjct: 195 LSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSE 254

Query: 181 YTFVGVLSGFVSEDHLESGYQIHSLVIKSN---DTSVVNALLNMYSKCSSTCAAEILFER 351
            +F+GVLSGF SE  LE G Q+H L+IK+    + SV+N+L+NMY KCS  C AE +FE 
Sbjct: 255 CSFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFEL 314

Query: 352 MQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFLHYG 531
             VRDVV WNT+IG LA+S+RP KVLE F  M+ DG+LP++ T+VSVINSCT L  L +G
Sbjct: 315 GCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFG 374

Query: 532 ESVHALLIKKRL 567
           E +HA +I+ ++
Sbjct: 375 EYIHAKVIRNKI 386



 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 6/200 (3%)
 Frame = +1

Query: 1   LGCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQ 180
           +  Y + G L  A  VF +M  +N+V++N+II  +      +E  ++F E+ R     +Q
Sbjct: 95  ISLYVLQGELSTARKVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQ 154

Query: 181 YTFVGVLSGFVSEDHLESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEIL-- 342
           +TF G+LS   +   L  G+Q+ + ++KS     D     ALL+++ +  + C  E++  
Sbjct: 155 HTFAGLLS--CASLKLSQGFQLQAQMVKSGLFHADPYAGTALLSLFGR--NGCIDEVVCA 210

Query: 343 FERMQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFL 522
           FE M  +++V WNT+I +        + +  FR +   G   S+ +++ V++       L
Sbjct: 211 FEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDL 270

Query: 523 HYGESVHALLIKKRLLCKTA 582
             GE VH LLIK    C+ +
Sbjct: 271 ELGEQVHDLLIKNGFDCEVS 290



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 4/171 (2%)
 Frame = +1

Query: 4    GCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQY 183
            G Y   G       +F  +   ++V+WN +I          E   +F+ +    I    Y
Sbjct: 525  GVYNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNY 584

Query: 184  TFVGVLSGFVSEDHLESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEILFER 351
            T V +LS      +L  G  IH  +IK++    DT V N L++MY KC    ++  +F +
Sbjct: 585  TVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNK 644

Query: 352  MQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSC 504
            +  R+++ W  +I  L  +    + L+ FR M   G  P     V+V ++C
Sbjct: 645  IIERNIITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSAC 695



 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
 Frame = +1

Query: 28   LDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVL-S 204
            L+ A   F ++  KN+V WN++I  + ++ F    +S+ + ++++    ++++F   L S
Sbjct: 406  LESAHCCFDEIDEKNVVCWNALILGYSNKCFSS--VSLLKRMLQLGYCPNEFSFSAALKS 463

Query: 205  GFVSEDH------LESGYQIHSLVIKSNDTSVV------------------------NAL 294
              V E        +  GYQ +  V  +  TS                          NA+
Sbjct: 464  SLVFELQQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAI 523

Query: 295  LNMYSKCSSTCAAEILFERMQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQ 474
              +Y+K       + LF  ++  D+V WN +I   AR+    +V E F++M    I P  
Sbjct: 524  AGVYNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDN 583

Query: 475  NTYVSVINSCTRLNFLHYGESVHALLIK 558
             T VS+++ CT+L  L  G S+H  +IK
Sbjct: 584  YTVVSLLSVCTKLCNLALGSSIHGFIIK 611



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 36/148 (24%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
 Frame = +1

Query: 67  KNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSGFVSEDHLESGYQI 246
           +++V+WN++I      E   + + +F ++    +  ++ TFV V++   +   L  G  I
Sbjct: 318 RDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYI 377

Query: 247 HSLVIKSNDTSVV---NALLNMYSKCSSTCAAEILFERMQVRDVVPWNTIIGVLARSDRP 417
           H+ VI++   S V   +AL++ Y+KC +  +A   F+ +  ++VV WN +I  L  S++ 
Sbjct: 378 HAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALI--LGYSNKC 435

Query: 418 GKVLECFRNMNEDGILPSQNTYVSVINS 501
              +   + M + G  P++ ++ + + S
Sbjct: 436 FSSVSLLKRMLQLGYCPNEFSFSAALKS 463


>emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
          Length = 954

 Score =  206 bits (525), Expect = 2e-51
 Identities = 102/192 (53%), Positives = 139/192 (72%), Gaps = 3/192 (1%)
 Frame = +1

Query: 1   LGCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQ 180
           L  +  NGC+DE +  F++MP KNLVTWN++I+LFG+  F +E + +FRELMR    LS+
Sbjct: 195 LSLFRRNGCIDEVVCAFEEMPLKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSE 254

Query: 181 YTFVGVLSGFVSEDHLESGYQIHSLVIKSN---DTSVVNALLNMYSKCSSTCAAEILFER 351
            +F+GVLSGF SE  LE G Q+H L+IK+    + SV+N+L+NMY KCS    AE +FE 
Sbjct: 255 CSFMGVLSGFASEQDLELGEQVHDLLIKNGFDXEVSVLNSLINMYVKCSCIXLAEKMFEL 314

Query: 352 MQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFLHYG 531
             VRDVV WNT+IG LA+S+RP KVLE F  M+ DG+LP++ T+VSVINSCT L  L +G
Sbjct: 315 GCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFG 374

Query: 532 ESVHALLIKKRL 567
           E +HA +I+ ++
Sbjct: 375 EYIHAKVIRNKI 386



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 6/192 (3%)
 Frame = +1

Query: 1   LGCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQ 180
           +  Y + G L  A  VF +M  +N+V++N+II  +      +E  ++F EL R     +Q
Sbjct: 95  ISLYVLQGELSTAREVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSELRRYGFEPTQ 154

Query: 181 YTFVGVLSGFVSEDHLESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEIL-- 342
           +TF G+LS   +   L  G+Q+ + ++KS     D     ALL+++ +  + C  E++  
Sbjct: 155 HTFAGLLS--CASLKLSQGFQLQAQMVKSGLFHADPYAGTALLSLFRR--NGCIDEVVCA 210

Query: 343 FERMQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFL 522
           FE M ++++V WNT+I +        + +  FR +   G   S+ +++ V++       L
Sbjct: 211 FEEMPLKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDL 270

Query: 523 HYGESVHALLIK 558
             GE VH LLIK
Sbjct: 271 ELGEQVHDLLIK 282



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
 Frame = +1

Query: 46   VFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSGFVSEDH 225
            +F  +   ++V+WN +I          E   +F+ +    I    YT V +LS      +
Sbjct: 539  LFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCN 598

Query: 226  LESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEILFERMQVRDVVPWNTIIG 393
            L  G  IH  +IK++    DT V N L++MY KC    ++  +F ++  R+++ W  +I 
Sbjct: 599  LALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIXRNIITWTALIS 658

Query: 394  VLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSC 504
             L  +    + L+ FR M   G  P     V+V ++C
Sbjct: 659  ALGVNGYANEALKLFREMESLGFKPDGVALVAVFSAC 695



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 31/208 (14%)
 Frame = +1

Query: 28   LDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVL-S 204
            L+ A   F ++  KN+V WN++I  + ++ F    +S+ + ++++    ++ +F   L S
Sbjct: 406  LESAHCCFDEIDEKNVVCWNALILGYSNKCFSS--VSLLKRMLQLGYXPNEXSFSAALKS 463

Query: 205  GFVSEDH------LESGYQIHSLVIKSNDTSVV------------------------NAL 294
              V E        +  GYQ +  V  +  TS                          NA+
Sbjct: 464  SLVFELQQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAI 523

Query: 295  LNMYSKCSSTCAAEILFERMQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQ 474
              +Y+K       + LF  ++  D+V WN +I   AR+    +V E F++M    I P  
Sbjct: 524  AGVYNKIGQYHXTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDN 583

Query: 475  NTYVSVINSCTRLNFLHYGESVHALLIK 558
             T VS+++ CT+L  L  G S+H  +IK
Sbjct: 584  YTVVSLLSVCTKLCNLALGSSIHGFIIK 611



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/148 (24%), Positives = 78/148 (52%), Gaps = 3/148 (2%)
 Frame = +1

Query: 67  KNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSGFVSEDHLESGYQI 246
           +++V+WN++I      E   + + +F ++    +  ++ TFV V++   +   L  G  I
Sbjct: 318 RDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYI 377

Query: 247 HSLVIKSNDTSVV---NALLNMYSKCSSTCAAEILFERMQVRDVVPWNTIIGVLARSDRP 417
           H+ VI++   S V   +AL++ Y+KC +  +A   F+ +  ++VV WN +I  L  S++ 
Sbjct: 378 HAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALI--LGYSNKC 435

Query: 418 GKVLECFRNMNEDGILPSQNTYVSVINS 501
              +   + M + G  P++ ++ + + S
Sbjct: 436 FSSVSLLKRMLQLGYXPNEXSFSAALKS 463


>ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|222862901|gb|EEF00408.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  192 bits (489), Expect = 4e-47
 Identities = 103/192 (53%), Positives = 131/192 (68%), Gaps = 3/192 (1%)
 Frame = +1

Query: 1   LGCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQ 180
           LG +G  G LDEA  VF+DMP K+LVTWNS+I+L GH  F ++C+ +FR+L+R   SLS+
Sbjct: 155 LGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMISLLGHHGFVEDCVVLFRKLVRKEGSLSK 214

Query: 181 YTFVGVLSGFVSEDHLESGYQIHSLVIKSN---DTSVVNALLNMYSKCSSTCAAEILFER 351
            +F GVLSG V E+ LE G QIH LVIKS    +  V N+L+NMY++ SS    E LFE 
Sbjct: 215 CSFEGVLSGLVCEEDLEFGGQIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEE 274

Query: 352 MQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFLHYG 531
           +  RDVV WNTII   ++S  PGK LE F  M+EDGI+P+Q T+VSVINSCT L     G
Sbjct: 275 VDGRDVVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCG 334

Query: 532 ESVHALLIKKRL 567
           E VH  ++K  L
Sbjct: 335 EYVHGKIVKTAL 346



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
 Frame = +1

Query: 4   GCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQY 183
           G Y  +G   E L     +   + V+WN +I         +E   +F+ +    +    Y
Sbjct: 486 GIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFKHMRVAQMLPDNY 545

Query: 184 TFVGVLSGFVSEDHLESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEILFER 351
           T+  +L       +L  G  IH L+IK+N    D  V N L++MY KC +  ++  +F+ 
Sbjct: 546 TYTSLLCVSSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFDS 605

Query: 352 MQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSC 504
           M  R+++ W  +I  L  +    + LE F +M   G  P +  +++V+ +C
Sbjct: 606 MTERNLITWTALISALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTAC 656



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
 Frame = +1

Query: 10  YGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTF 189
           Y   G LD A + F+++  KN+V+WNS+I  + ++      +S+  E++++    ++++F
Sbjct: 360 YAKCGKLDNAHYCFREIHQKNVVSWNSLILGYANK-CSFASVSLLLEMLKLGFRPNEFSF 418

Query: 190 VGVL-SGFVSEDHLESGYQIHSLVIK---SNDTSVVNALLNMYS------------KCSS 321
             VL S  V E       QIHSL I+    N+  V+ +L+  Y             K S 
Sbjct: 419 SAVLKSSLVLELK-----QIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVKASE 473

Query: 322 TCAAEI--------------------LFERMQVRDVVPWNTIIGVLARSDRPGKVLECFR 441
           T  A +                       +++  D V WN +I   AR+    +V E F+
Sbjct: 474 TLLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFK 533

Query: 442 NMNEDGILPSQNTYVSVINSCTRLNFLHYGESVHALLIK 558
           +M    +LP   TY S++   +++  L  G S+H LLIK
Sbjct: 534 HMRVAQMLPDNYTYTSLLCVSSKVCNLALGSSIHGLLIK 572



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 5/182 (2%)
 Frame = +1

Query: 46  VFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSGFVSEDH 225
           VF +MPH+N V++NSII+ F    + +E    F E++      + +T  G+LS   +   
Sbjct: 70  VFDNMPHRNKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLLS--CASMD 127

Query: 226 LESGYQIHSLVIKS----NDTSVVNALLNMYSKCSSTCAAEILFERMQVRDVVPWNTIIG 393
           +  G  + +L IK+    +D  V  ALL ++ +C     A  +FE M  + +V WN++I 
Sbjct: 128 VGRGIMLQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMIS 187

Query: 394 VLARSDRPGKVLECFRNM-NEDGILPSQNTYVSVINSCTRLNFLHYGESVHALLIKKRLL 570
           +L         +  FR +  ++G L S+ ++  V++       L +G  +H L+IK  L 
Sbjct: 188 LLGHHGFVEDCVVLFRKLVRKEGSL-SKCSFEGVLSGLVCEEDLEFGGQIHGLVIKSGLD 246

Query: 571 CK 576
           C+
Sbjct: 247 CE 248



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
 Frame = +1

Query: 1   LGCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQ 180
           +  Y     + +   +F+++  +++VTWN+II+ F   +   + + VF ++    I  +Q
Sbjct: 256 INMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMPNQ 315

Query: 181 YTFVGVLSGFVSEDHLESGYQIHSLVIKS---NDTSVVNALLNMYSKCSSTCAAEILFER 351
            TFV V++   S      G  +H  ++K+    D  + +AL++ Y+KC     A   F  
Sbjct: 316 TTFVSVINSCTSLLVPMCGEYVHGKIVKTALETDVYLGSALVDYYAKCGKLDNAHYCFRE 375

Query: 352 MQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFLHYG 531
           +  ++VV WN++I   A       V      M + G  P++ ++ +V+ S   L      
Sbjct: 376 IHQKNVVSWNSLILGYANKCSFASV-SLLLEMLKLGFRPNEFSFSAVLKSSLVLEL---- 430

Query: 532 ESVHALLIK 558
           + +H+L I+
Sbjct: 431 KQIHSLTIR 439


>ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Glycine max]
          Length = 732

 Score =  166 bits (421), Expect = 3e-39
 Identities = 88/190 (46%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
 Frame = +1

Query: 1   LGCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQ 180
           LG +G  GC DE    F+DMP K+LVTWNS+++L     F +EC  +FR+L+   ISLS+
Sbjct: 155 LGLFGRLGCWDELFLAFEDMPQKSLVTWNSMVSLLARNGFVEECKILFRDLVGTGISLSE 214

Query: 181 YTFVGVLSGFV-SEDHLESGYQIHSLVIKSN---DTSVVNALLNMYSKCSSTCAAEILFE 348
            + V VLSG V SE+ LE G QIH L++K     + +  N+L+++Y +C +  A E LFE
Sbjct: 215 GSVVAVLSGLVDSEEDLEYGEQIHGLMVKCGFGCEITAANSLISVYVRCKAMFAVERLFE 274

Query: 349 RMQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFLHY 528
           ++ V +VV WNT+I  L +S+RP   L+ F NM   G++PSQ T+V+VI+SCT L     
Sbjct: 275 QVPVENVVSWNTVIDALVKSERPMMALDLFLNMARRGLMPSQATFVAVIHSCTSLRNSVC 334

Query: 529 GESVHALLIK 558
           GESVHA +I+
Sbjct: 335 GESVHAKIIR 344



 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
 Frame = +1

Query: 4   GCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQY 183
           G Y       E + +   +   + V+WN +I+        DE  ++F+ +    I    Y
Sbjct: 487 GIYNRTSLYHETIKLLSLLEKPDAVSWNIVISACARSNSYDEVFALFKHMHSACIHPDSY 546

Query: 184 TFVGVLSGFVSEDHLESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEILFER 351
           TF+ ++S       L  G  +H L+IK+N    DT + N L++MY KC S  ++  +FE 
Sbjct: 547 TFMSIISVCTKLCLLNLGSSLHGLIIKTNLSNYDTFLGNVLIDMYGKCGSIDSSVKVFEE 606

Query: 352 MQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSC 504
           +  ++++ W  +I  L  +    + +  F+N+   G+ P      +V++SC
Sbjct: 607 IMYKNIITWTALITALGLNGFAHEAVMRFQNLELMGLKPDALALRAVLSSC 657



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
 Frame = +1

Query: 49  FKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVL-SGFVSEDH 225
           F  +  KN+V+WN++IT + +       I + ++++++  S ++++F  VL S  +S  H
Sbjct: 374 FDQIEEKNVVSWNALITGYSNI-CSSTSILLLQKMLQLGYSPNEFSFSAVLKSSSMSNLH 432

Query: 226 ------LESGYQIHSLVIKS----------------------NDTSVV--NALLNMYSKC 315
                 + SGY+ +  V+ S                      N   VV  N +  +Y++ 
Sbjct: 433 QLHGLIIRSGYESNEYVLSSLVMAYTRNGLINEALSFVEEFNNPLPVVPSNIIAGIYNRT 492

Query: 316 SSTCAAEILFERMQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVI 495
           S       L   ++  D V WN +I   ARS+   +V   F++M+   I P   T++S+I
Sbjct: 493 SLYHETIKLLSLLEKPDAVSWNIVISACARSNSYDEVFALFKHMHSACIHPDSYTFMSII 552

Query: 496 NSCTRLNFLHYGESVHALLIKKRL 567
           + CT+L  L+ G S+H L+IK  L
Sbjct: 553 SVCTKLCLLNLGSSLHGLIIKTNL 576



 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
 Frame = +1

Query: 46  VFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSGFVSEDH 225
           +F  +PH+ +V++N++IT +  R   D+  ++   +     + +QYT  G+LS  +    
Sbjct: 70  LFDALPHRTVVSYNTLITAYCRRGNVDDAWNLLCHMRGSGFAPTQYTLTGLLSCELLNH- 128

Query: 226 LESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEILFERMQVRDVVPWNTIIG 393
              G Q+ +L I++     D  V  ALL ++ +        + FE M  + +V WN+++ 
Sbjct: 129 -SRGVQLQALSIRNGLLDADAFVGTALLGLFGRLGCWDELFLAFEDMPQKSLVTWNSMVS 187

Query: 394 VLARSDRPGKVLEC---FRNMNEDGILPSQNTYVSVINSCT-RLNFLHYGESVHALLIKK 561
           +LAR+   G V EC   FR++   GI  S+ + V+V++        L YGE +H L++K 
Sbjct: 188 LLARN---GFVEECKILFRDLVGTGISLSEGSVVAVLSGLVDSEEDLEYGEQIHGLMVKC 244

Query: 562 RLLCK 576
              C+
Sbjct: 245 GFGCE 249



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 48/174 (27%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
 Frame = +1

Query: 46  VFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSGFVSEDH 225
           +F+ +P +N+V+WN++I      E     + +F  + R  +  SQ TFV V+    S  +
Sbjct: 272 LFEQVPVENVVSWNTVIDALVKSERPMMALDLFLNMARRGLMPSQATFVAVIHSCTSLRN 331

Query: 226 LESGYQIHSLVIKS---NDTSVVNALLNMYSKCSSTCAAEILFERMQVRDVVPWNTIIGV 396
              G  +H+ +I+S   +D  V  AL++ YSKC    +A   F++++ ++VV WN +I  
Sbjct: 332 SVCGESVHAKIIRSGFESDVIVGTALVDFYSKCDKFISAHKCFDQIEEKNVVSWNALITG 391

Query: 397 LARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFLHYGESVHALLIK 558
            +       +L   + M + G  P++ ++ +V+ S +  N LH    +H L+I+
Sbjct: 392 YSNICSSTSIL-LLQKMLQLGYSPNEFSFSAVLKSSSMSN-LH---QLHGLIIR 440


>ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535593|gb|EEF37261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 792

 Score =  161 bits (407), Expect = 1e-37
 Identities = 91/189 (48%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
 Frame = +1

Query: 1   LGCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMR-IHISLS 177
           L  +G  G L+EAL VF+D+P K+LVTWNSII LFG   + ++CI  F EL R I   LS
Sbjct: 155 LNVFGRWGWLNEALHVFEDLPIKSLVTWNSIICLFGQHGYVEDCIIYFCELHREIGCCLS 214

Query: 178 QYTFVGVLSGFVSEDHLESGYQIHSLVIKSN---DTSVVNALLNMYSKCSSTCAAEILFE 348
           + +FVGVLSG V   +LE G QIHSLV K+      SVVN+++++Y KC++   AE  FE
Sbjct: 215 ECSFVGVLSGLVCGKYLEFGEQIHSLVTKTGFDYTVSVVNSVISVYVKCATLHLAEKKFE 274

Query: 349 RMQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFLHY 528
               +D+V WNT+I  LA+S++P K LE F  M  D I P+Q T+ S+I+SC  L    Y
Sbjct: 275 EAACKDIVTWNTMIVALAKSEKPIKALELFFKMPRDAIRPNQITFASLISSCANLQIPMY 334

Query: 529 GESVHALLI 555
            E +HA +I
Sbjct: 335 AEFIHAKVI 343



 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
 Frame = +1

Query: 4   GCYGINGCLDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQY 183
           G Y   G   + L +   +   + V+WN  I          E   +F++++   I    Y
Sbjct: 487 GIYNKAGHYYKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQMLVAQIHPDNY 546

Query: 184 TFVGVLSGFVSEDHLESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEILFER 351
           T+V +LS       L  G  IH  +IK+N    DT V N LL+MY KC    ++  +F  
Sbjct: 547 TYVSLLSSSSQICDLALGSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRSSVKIFNS 606

Query: 352 MQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSC 504
           M+ R+++ W  +I  L  +    + LE F++M   G+ P +  +++V+ +C
Sbjct: 607 MRDRNLITWTALISALGINSCAHEALERFKDMEHQGLRPDKVAFIAVLTAC 657



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
 Frame = +1

Query: 46  VFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSGFVSEDH 225
           VF +MP +++ ++NSIIT +    + +E + VF  +       + +T  G+LS   S+  
Sbjct: 70  VFDNMPQRSIASYNSIITSYCKYGYLEEALGVFSRMRDCGFRPNNFTLSGLLS--CSKMD 127

Query: 226 LESGYQIHSLVIKSN----DTSVVNALLNMYSKCSSTCAAEILFERMQVRDVVPWNTIIG 393
           L  G Q+ +L +K+     D  V  ALLN++ +      A  +FE + ++ +V WN+II 
Sbjct: 128 LSIGLQLQALAMKNGLFYIDAFVGTALLNVFGRWGWLNEALHVFEDLPIKSLVTWNSIIC 187

Query: 394 VLARSDRPGKVLECF----RNMNEDGILPSQNTYVSVINSCTRLNFLHYGESVHALLIK 558
           +  +    G V +C         E G   S+ ++V V++      +L +GE +H+L+ K
Sbjct: 188 LFGQH---GYVEDCIIYFCELHREIGCCLSECSFVGVLSGLVCGKYLEFGEQIHSLVTK 243



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 35/212 (16%)
 Frame = +1

Query: 28  LDEALWVFKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSG 207
           LD+A   F  +  KN+V+WNS+I L    +     IS+  E+++     ++++F  VL  
Sbjct: 367 LDDARCCFVKIHEKNVVSWNSLI-LGCANKCPYAAISLLVEMLQCGYQPNEFSFSAVL-- 423

Query: 208 FVSEDHLESGYQIHSLVIK---SNDTSVVNALLNMYSK------------CSSTCAAEI- 339
            +S   LE   Q+H L+I+    N+  V+++L+  Y +             S T  A + 
Sbjct: 424 -ISSSILEL-QQLHCLIIRMGYDNNDYVLSSLITSYGRNGLISDALVFLAASETPLAAVP 481

Query: 340 -------------------LFERMQVRDVVPWNTIIGVLARSDRPGKVLECFRNMNEDGI 462
                              L  +++  D V WN  I   AR+    +V E F+ M    I
Sbjct: 482 SNNVAGIYNKAGHYYKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQMLVAQI 541

Query: 463 LPSQNTYVSVINSCTRLNFLHYGESVHALLIK 558
            P   TYVS+++S +++  L  G S+H  LIK
Sbjct: 542 HPDNYTYVSLLSSSSQICDLALGSSIHGFLIK 573



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 43/173 (24%), Positives = 84/173 (48%), Gaps = 3/173 (1%)
 Frame = +1

Query: 49  FKDMPHKNLVTWNSIITLFGHREFGDECISVFRELMRIHISLSQYTFVGVLSGFVSEDHL 228
           F++   K++VTWN++I      E   + + +F ++ R  I  +Q TF  ++S   +    
Sbjct: 273 FEEAACKDIVTWNTMIVALAKSEKPIKALELFFKMPRDAIRPNQITFASLISSCANLQIP 332

Query: 229 ESGYQIHSLVIK---SNDTSVVNALLNMYSKCSSTCAAEILFERMQVRDVVPWNTIIGVL 399
                IH+ VI      D  V +AL++ Y+KC     A   F ++  ++VV WN++I + 
Sbjct: 333 MYAEFIHAKVIMHAFDTDVYVGSALVDYYAKCDKLDDARCCFVKIHEKNVVSWNSLI-LG 391

Query: 400 ARSDRPGKVLECFRNMNEDGILPSQNTYVSVINSCTRLNFLHYGESVHALLIK 558
             +  P   +     M + G  P++ ++ +V+ S + L      + +H L+I+
Sbjct: 392 CANKCPYAAISLLVEMLQCGYQPNEFSFSAVLISSSILEL----QQLHCLIIR 440