BLASTX nr result

ID: Bupleurum21_contig00023080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023080
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31584.3| unnamed protein product [Vitis vinifera]              439   e-127
ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange f...   439   e-127
ref|XP_002312130.1| predicted protein [Populus trichocarpa] gi|2...   421   e-122
ref|XP_002524258.1| Rop guanine nucleotide exchange factor, puta...   416   e-122
ref|XP_002315189.1| predicted protein [Populus trichocarpa] gi|2...   418   e-122

>emb|CBI31584.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  439 bits (1128), Expect(2) = e-127
 Identities = 230/335 (68%), Positives = 261/335 (77%)
 Frame = +2

Query: 77   PVPRVPAGGLQEETRKQLNHKRECVNQILKASMSINGIVLAEMAVPNSYLETLPKNGRAC 256
            PVPRVP GGL E +RKQLNHKRE  NQILKA+M+IN   LAEM VP S+LE LPKNGRAC
Sbjct: 258  PVPRVPPGGLSENSRKQLNHKRESANQILKAAMAINSNALAEMEVPESFLEALPKNGRAC 317

Query: 257  LGDVIYRYVTSEYFSPECLLDCLDMSNEHTALEIANRVETSIYVWRKRLHSKPVNNPNRS 436
            LGD+IYRY+TS+ FS ECLLDCLD+S+EH ALEIANRVE SIYVWR+R H KP+ NPNRS
Sbjct: 318  LGDIIYRYITSDQFSSECLLDCLDLSSEHVALEIANRVEASIYVWRRRTHHKPMTNPNRS 377

Query: 437  TAKSSWEMVRDLMVDGDHKXXXXXXXXXXXXXXXKQRFPGLTQTSLDTTKIQCNKDVGKS 616
            TAKSSWEMV+DLMVDGD K               KQRFPGLTQT+LDT+KIQCNKDVGKS
Sbjct: 378  TAKSSWEMVKDLMVDGD-KRELLAERAESLFLSLKQRFPGLTQTTLDTSKIQCNKDVGKS 436

Query: 617  ILEAYSRVLESLAFNIVARIDDLLYVDDLSRNSGKIPSVPTISVISHKRVNIPYSMPASG 796
            ILE+YSRVLESLAFNIVARIDDLLYVDDL++ S K  SVPT+SVI+HKRV+IPYS+P S 
Sbjct: 437  ILESYSRVLESLAFNIVARIDDLLYVDDLNKQSDKHSSVPTVSVIAHKRVSIPYSVPVSS 496

Query: 797  TPYKSAFATPKFSPAKVANSPAKGERTPFLGANIDKPPRRGFGVKRVLTNYLVGETKLKN 976
            TP K+A  T   SPA +  SPA+GERTPFL    +KPPRRGFGVKRVL NYL  ETK KN
Sbjct: 497  TPQKTALTTLSRSPAPLI-SPARGERTPFLH---NKPPRRGFGVKRVLNNYLGVETKTKN 552

Query: 977  CSNQLEGPPGSSIGNETVEVVASGTQKEGNEHQKE 1081
              N  EG   S+I    VE  A+ T+ +  +H+KE
Sbjct: 553  SGNPTEGGLTSTI---VVEAPATRTETKNMQHKKE 584



 Score = 43.9 bits (102), Expect(2) = e-127
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 1   EILDSFSKTEFWYIDQGIVASDADKSSA 84
           EILD F+ TEFWY+DQGI+A + D S++
Sbjct: 216 EILDGFTNTEFWYVDQGIIAPETDGSAS 243


>ref|XP_002277071.2| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis vinifera]
          Length = 571

 Score =  439 bits (1128), Expect(2) = e-127
 Identities = 230/335 (68%), Positives = 261/335 (77%)
 Frame = +2

Query: 77   PVPRVPAGGLQEETRKQLNHKRECVNQILKASMSINGIVLAEMAVPNSYLETLPKNGRAC 256
            PVPRVP GGL E +RKQLNHKRE  NQILKA+M+IN   LAEM VP S+LE LPKNGRAC
Sbjct: 233  PVPRVPPGGLSENSRKQLNHKRESANQILKAAMAINSNALAEMEVPESFLEALPKNGRAC 292

Query: 257  LGDVIYRYVTSEYFSPECLLDCLDMSNEHTALEIANRVETSIYVWRKRLHSKPVNNPNRS 436
            LGD+IYRY+TS+ FS ECLLDCLD+S+EH ALEIANRVE SIYVWR+R H KP+ NPNRS
Sbjct: 293  LGDIIYRYITSDQFSSECLLDCLDLSSEHVALEIANRVEASIYVWRRRTHHKPMTNPNRS 352

Query: 437  TAKSSWEMVRDLMVDGDHKXXXXXXXXXXXXXXXKQRFPGLTQTSLDTTKIQCNKDVGKS 616
            TAKSSWEMV+DLMVDGD K               KQRFPGLTQT+LDT+KIQCNKDVGKS
Sbjct: 353  TAKSSWEMVKDLMVDGD-KRELLAERAESLFLSLKQRFPGLTQTTLDTSKIQCNKDVGKS 411

Query: 617  ILEAYSRVLESLAFNIVARIDDLLYVDDLSRNSGKIPSVPTISVISHKRVNIPYSMPASG 796
            ILE+YSRVLESLAFNIVARIDDLLYVDDL++ S K  SVPT+SVI+HKRV+IPYS+P S 
Sbjct: 412  ILESYSRVLESLAFNIVARIDDLLYVDDLNKQSDKHSSVPTVSVIAHKRVSIPYSVPVSS 471

Query: 797  TPYKSAFATPKFSPAKVANSPAKGERTPFLGANIDKPPRRGFGVKRVLTNYLVGETKLKN 976
            TP K+A  T   SPA +  SPA+GERTPFL    +KPPRRGFGVKRVL NYL  ETK KN
Sbjct: 472  TPQKTALTTLSRSPAPLI-SPARGERTPFLH---NKPPRRGFGVKRVLNNYLGVETKTKN 527

Query: 977  CSNQLEGPPGSSIGNETVEVVASGTQKEGNEHQKE 1081
              N  EG   S+I    VE  A+ T+ +  +H+KE
Sbjct: 528  SGNPTEGGLTSTI---VVEAPATRTETKNMQHKKE 559



 Score = 43.9 bits (102), Expect(2) = e-127
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = +1

Query: 1   EILDSFSKTEFWYIDQGIVASDADKSSA 84
           EILD F+ TEFWY+DQGI+A + D S++
Sbjct: 191 EILDGFTNTEFWYVDQGIIAPETDGSAS 218


>ref|XP_002312130.1| predicted protein [Populus trichocarpa] gi|222851950|gb|EEE89497.1|
            predicted protein [Populus trichocarpa]
          Length = 466

 Score =  421 bits (1081), Expect(2) = e-122
 Identities = 210/309 (67%), Positives = 248/309 (80%), Gaps = 6/309 (1%)
 Frame = +2

Query: 77   PVPRVPAGGLQEETRKQLNHKRECVNQILKASMSINGIVLAEMAVPNSYLETLPKNGRAC 256
            PVPRVPAGGL ++TRKQLNH REC NQILKA+M+IN + LAEM VP+SYLE LPKNGRAC
Sbjct: 160  PVPRVPAGGLSDDTRKQLNHTRECTNQILKAAMAINSVALAEMDVPDSYLEALPKNGRAC 219

Query: 257  LGDVIYRYVTSEYFSPECLLDCLDMSNEHTALEIANRVETSIYVWRKRLHSKPVNNPNRS 436
            LGD++YRY+TS+ FS ECLLDCLD+S+EH ALEIANRVE+SIYVWR+R HS+P  NPNRS
Sbjct: 220  LGDLVYRYITSDQFSAECLLDCLDLSSEHVALEIANRVESSIYVWRRRAHSRPPPNPNRS 279

Query: 437  TAKSSWEMVRDLMVDGDHKXXXXXXXXXXXXXXXKQRFPGLTQTSLDTTKIQCNKDVGKS 616
              KSSWEMV+DLMVDGD K               K RFP LTQT+LDT+KIQ NKDVGKS
Sbjct: 280  MTKSSWEMVKDLMVDGD-KRELLAERAESLLLSLKHRFPNLTQTALDTSKIQFNKDVGKS 338

Query: 617  ILEAYSRVLESLAFNIVARIDDLLYVDDLSRNSGKIPSVPTISVISHKRVNIPYSMPASG 796
            ILE+YSRVLESLAFNIVARIDDL+YVDDL++ S  + SV T++VISH++V+ P+S+P SG
Sbjct: 339  ILESYSRVLESLAFNIVARIDDLVYVDDLTKRSDNLSSVSTVAVISHRKVSNPFSVPVSG 398

Query: 797  TPYKSAFATPKFSPAKVANSPAKGERTPFL------GANIDKPPRRGFGVKRVLTNYLVG 958
            TPYK+ F+TP FSP  +  SPA+GERTPFL       +N +KPPRRGFGVKR LTNYL  
Sbjct: 399  TPYKTTFSTPSFSPVPLI-SPARGERTPFLHSTTSSKSNNNKPPRRGFGVKRALTNYLAV 457

Query: 959  ETKLKNCSN 985
            ++K K C N
Sbjct: 458  DSKPKICGN 466



 Score = 45.4 bits (106), Expect(2) = e-122
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = +1

Query: 1   EILDSFSKTEFWYIDQGIVASDADKSSA 84
           E+LDSF  TEFWY+DQGIVA D D S++
Sbjct: 118 EVLDSFVDTEFWYVDQGIVAPDGDGSAS 145


>ref|XP_002524258.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
            gi|223536535|gb|EEF38182.1| Rop guanine nucleotide
            exchange factor, putative [Ricinus communis]
          Length = 590

 Score =  416 bits (1070), Expect(2) = e-122
 Identities = 217/335 (64%), Positives = 259/335 (77%), Gaps = 8/335 (2%)
 Frame = +2

Query: 77   PVPRVPAGGLQEETRKQLNHKRECVNQILKASMSINGIVLAEMAVPNSYLETLPKNGRAC 256
            PVPR+PAGGL +++RKQLNH REC NQILKA+M+IN I LAEM VP SYLETLPKNGRAC
Sbjct: 248  PVPRLPAGGLSDKSRKQLNHTRECTNQILKAAMAINSIALAEMDVPYSYLETLPKNGRAC 307

Query: 257  LGDVIYRYVTSEYFSPECLLDCLDMSNEHTALEIANRVETSIYVWRKRLHSKPVNNPNRS 436
            LGD+IYRY+TS+ FS ECLLD LD+S EH AL+ ANRVE++IYVWR+R HSKP   PNRS
Sbjct: 308  LGDLIYRYITSDQFSSECLLDFLDLSTEHVALDTANRVESAIYVWRRRAHSKPQVYPNRS 367

Query: 437  TAKSSWEMVRDLMVDGDHKXXXXXXXXXXXXXXXKQRFPGLTQTSLDTTKIQCNKDVGKS 616
            TA+SSW+MV+D MVDGD K               KQRFP L+QT+LDT+KIQ NKDVGKS
Sbjct: 368  TARSSWDMVKDFMVDGD-KRELLAERAESLLLSLKQRFPSLSQTTLDTSKIQFNKDVGKS 426

Query: 617  ILEAYSRVLESLAFNIVARIDDLLYVDDLSRNSGKIPSVPTISVISHKRVNIPYSMPASG 796
            ILE+YSR+LESLAFNIVARIDDLLYVDDL+++S K+  V T+SVI+HK+V IPYS+P SG
Sbjct: 427  ILESYSRILESLAFNIVARIDDLLYVDDLTKHSDKL-QVSTVSVIAHKKVTIPYSVPVSG 485

Query: 797  TPYKSAFATPKFSPAKVANSPAKGERTPFL-------GANIDKPPRRGFGVKRVLTNYLV 955
            TPY++ F+TP FSPA +  SPA+GERTPFL         N +KP RRGFGVKRVLTNYL 
Sbjct: 486  TPYRTTFSTPSFSPAPLI-SPARGERTPFLPNAATAATNNSNKPHRRGFGVKRVLTNYLG 544

Query: 956  GETKLKNCSNQLEGP-PGSSIGNETVEVVASGTQK 1057
             ++K + C N  EG  P S+IG      + +GT K
Sbjct: 545  VDSKPRICGNSTEGSCPNSNIGGTEGRGIDNGTAK 579



 Score = 48.5 bits (114), Expect(2) = e-122
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +1

Query: 1   EILDSFSKTEFWYIDQGIVASDADKSSA 84
           EILDSF+ TEFWY+DQGIVA DAD S++
Sbjct: 206 EILDSFADTEFWYVDQGIVAPDADGSTS 233


>ref|XP_002315189.1| predicted protein [Populus trichocarpa] gi|222864229|gb|EEF01360.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  418 bits (1075), Expect(2) = e-122
 Identities = 210/313 (67%), Positives = 250/313 (79%), Gaps = 6/313 (1%)
 Frame = +2

Query: 77  PVPRVPAGGLQEETRKQLNHKRECVNQILKASMSINGIVLAEMAVPNSYLETLPKNGRAC 256
           PVPRVPAGGL  +TRKQLNH REC NQILKA+M+IN + LAEM +P+SYLE LPKNGRAC
Sbjct: 46  PVPRVPAGGLSNDTRKQLNHTRECTNQILKAAMAINSVALAEMDIPDSYLEALPKNGRAC 105

Query: 257 LGDVIYRYVTSEYFSPECLLDCLDMSNEHTALEIANRVETSIYVWRKRLHSKPVNNPNRS 436
           LGD++YRY+TS+ FS ECLLDCLD+S+EH AL+IANRVE++IYVWR+R HS+P  NPNRS
Sbjct: 106 LGDLVYRYITSDQFSAECLLDCLDLSSEHVALDIANRVESAIYVWRRRAHSRPPPNPNRS 165

Query: 437 TAKSSWEMVRDLMVDGDHKXXXXXXXXXXXXXXXKQRFPGLTQTSLDTTKIQCNKDVGKS 616
           T KSSWEMV+DL+VDGD K               KQ FP LTQT+LDT+KIQ NKDVGKS
Sbjct: 166 TTKSSWEMVKDLIVDGD-KRELLAERAESLLLSLKQWFPNLTQTTLDTSKIQFNKDVGKS 224

Query: 617 ILEAYSRVLESLAFNIVARIDDLLYVDDLSRNSGKIPSVPTISVISHKRVNIPYSMPASG 796
           I+E+YSRVLESLAFNIVARIDDLLYVDDL+++S K+ SVPT+SVISHK+V+IPYS+P SG
Sbjct: 225 IIESYSRVLESLAFNIVARIDDLLYVDDLTKHSDKLSSVPTVSVISHKKVSIPYSVPVSG 284

Query: 797 TPYKSAFATPKFSPAKVANSPAKGERTPFL------GANIDKPPRRGFGVKRVLTNYLVG 958
           T YK+ F+TP FSP  +  SP +GERTPFL        + +KP  RGFGVKRVLTNYL  
Sbjct: 285 TSYKTTFSTPSFSPMPLI-SPVRGERTPFLHNITTSNNDNNKPHHRGFGVKRVLTNYLGV 343

Query: 959 ETKLKNCSNQLEG 997
           +++ K C N  EG
Sbjct: 344 DSRPKICGNTNEG 356



 Score = 46.6 bits (109), Expect(2) = e-122
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +1

Query: 1  EILDSFSKTEFWYIDQGIVASDADKSSA 84
          E+LDSF+ TEFWY+DQGI A DAD S++
Sbjct: 4  EVLDSFTDTEFWYVDQGIAAPDADGSAS 31


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