BLASTX nr result
ID: Bupleurum21_contig00023078
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00023078 (1314 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509961.1| ring finger protein, putative [Ricinus commu... 274 4e-71 ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|2... 260 6e-67 ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262... 256 7e-66 emb|CBI23148.3| unnamed protein product [Vitis vinifera] 256 7e-66 ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein A... 250 7e-64 >ref|XP_002509961.1| ring finger protein, putative [Ricinus communis] gi|223549860|gb|EEF51348.1| ring finger protein, putative [Ricinus communis] Length = 392 Score = 274 bits (700), Expect = 4e-71 Identities = 158/355 (44%), Positives = 206/355 (58%), Gaps = 18/355 (5%) Frame = -1 Query: 1185 CQPTSCTPSGLPVRFPFRLVGRQPRECGYPGFELFCNNKSQLLLNLPFAGEFVVTDINYS 1006 CQ SC+ +G +RFPF L G + C YPGF L C+ Q +L LP AG F+V I+YS Sbjct: 22 CQE-SCSRTGQEIRFPFGLTGGR---CSYPGFNLSCSAGDQTILALPRAGNFIVQFIDYS 77 Query: 1005 LQTIYFK-PEFCPPNSIL-SFSPFVSPFIDGILTEYTFFNCSSS---RFFPVAEPFEVLG 841 Q IY + P C L +FS SPFI I +TF NCSS+ F P + + Sbjct: 78 AQQIYIRDPGNCIAERFLKNFSLSGSPFIAEIYRSFTFLNCSSNFSASFLPPSS--RKVK 135 Query: 840 CFGDRNNTIVTVQSKYYNGFRDRSLPESCRSDSGTAEI-------LEG---FRWGLPVCR 691 C N+T+V + + Y G+ S P SC + E+ EG W P CR Sbjct: 136 CLSSENSTVVALLNSYDQGYEPSSFP-SCTVMAKRVEVPVSWYRWAEGDASLTWTKPDCR 194 Query: 690 VCERENRTCGFRNVDTLEVGC--LGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKR 517 CE TCGF+ L++GC L SK L +AKYGI++G G+PG+ +I L Y Sbjct: 195 SCEERGGTCGFKGDTGLDIGCFDLPRSKRALPRSAKYGIIIGIGIPGLLCIIGLGCYVAG 254 Query: 516 KINN-RADIQPHNARSLPTTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDSTC 340 ++ R + H++ +L T QP V G+D T++ YP T+LGES+RLPKP+D+TC Sbjct: 255 RVGTYRRSL--HSSTAL-NATFPRQPSMAVTGIDGATLELYPKTLLGESRRLPKPNDNTC 311 Query: 339 AICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSPDGLFGRVATP 175 ICL EYQP +TLRT+PECNHYFH+ CIDEWLK+NATCP+CRNSPD VATP Sbjct: 312 PICLCEYQPKETLRTIPECNHYFHADCIDEWLKMNATCPLCRNSPD--VSSVATP 364 >ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|222845233|gb|EEE82780.1| predicted protein [Populus trichocarpa] Length = 378 Score = 260 bits (664), Expect = 6e-67 Identities = 146/348 (41%), Positives = 196/348 (56%), Gaps = 18/348 (5%) Frame = -1 Query: 1188 TCQPTSCTPSGLPVRFPFRLVGRQPRECGYPGFELFCNNKSQLL-LNLPFAGEFVVTDIN 1012 TC C + L VRFPF G C YPGF+L C++K+Q++ L+LP G F V +IN Sbjct: 22 TCH-NPCLRNSLEVRFPF---GFDNNRCSYPGFKLSCDSKTQIITLDLPNIGNFTVRNIN 77 Query: 1011 YSLQTIYFK-PEFCPPNSIL--SFSPFVSPFIDGILTEY-----TFFNCSSSRFFPVAEP 856 Y QT+ P+ C + SF SPF + EY TF NCS++ V Sbjct: 78 YGSQTVTITDPQNCLAKKFIDSSFDLSGSPFN---IPEYYNHFFTFLNCSTNST-TVISG 133 Query: 855 FEVLGCFGDRNNTIVTVQSKYYNGFRDRSLPESCRSDSGTAEILEGFRWG---------L 703 + C + N T+VT+ + Y F D +P C + +RW Sbjct: 134 IRRVNCLSNENFTVVTLPTNIYESFPD-FMPPFCTELKKRVAVPPWYRWSDSETRLIWNE 192 Query: 702 PVCRVCERENRTCGFRNVDTLEVGCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYA 523 P C CE + TC F+ L + C G SK L +AKYGI++GAG+PG+ +I + +Y Sbjct: 193 PYCLPCEVDGGTCQFKGNTGLTIDCNGRSKGPLPRSAKYGIIIGAGIPGLLCIIGIVSYV 252 Query: 522 KRKINNRADIQPHNARSLPTTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDST 343 ++ R+ +T+++PQP V GLD TI+SYP T LG+S RLPKP+D+T Sbjct: 253 FGRLKARSSGNEPTMEM--STSVAPQPCVVVTGLDGPTIESYPKTQLGDSGRLPKPNDNT 310 Query: 342 CAICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSPDG 199 C ICLSEYQP DTLRT+P CNHYFH+ C+DEWLK+NATCP+CRNSPDG Sbjct: 311 CPICLSEYQPKDTLRTIPNCNHYFHANCVDEWLKMNATCPLCRNSPDG 358 >ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262465 [Vitis vinifera] Length = 1054 Score = 256 bits (655), Expect = 7e-66 Identities = 144/346 (41%), Positives = 190/346 (54%), Gaps = 19/346 (5%) Frame = -1 Query: 1185 CQPTSCTPSGLPVRFPFRLVGRQPRECGYPGFELFCNNKSQLLLNLPFAGEFVVTDINYS 1006 C+ +SC S L +RFPFRL QP CGYPGF+L C+ Q +L LP +GEF V I+Y Sbjct: 8 CEKSSCHRSELEIRFPFRLEDHQPESCGYPGFDLSCDATMQTILKLP-SGEFSVQGIDYG 66 Query: 1005 LQTIYFK-PEFCPPNSILSFSPFVSPFIDGILTEYTFFNCSSSRFFPVAEPFEVLGCFGD 829 Q I+ P+ C P ILS + S F Y+FF CS+ + + C D Sbjct: 67 TQEIWINDPKNCLPRLILSLNLSGSSFRGVYYHNYSFFKCSADY------RLDSIACLSD 120 Query: 828 RNNTIVTVQSKYYNGFRD------------RSLP--ESCRSDSGTAEILEGFRWGLPVCR 691 N T+ S F LP + + ++++L WG P C Sbjct: 121 DNYTVFATDSSRVINFLSPVCDLIKSVMVPAELPFYDPVWTSDLSSDLL--LSWGAPRCG 178 Query: 690 VCERENRTCGFRNVDTLEVGCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKRKI 511 CE E CGFR+ +LE+GC K GL TA+Y I VG G+P + + L + ++ Sbjct: 179 DCEMEGGRCGFRSNSSLEIGCFDVPKRGLPRTARYAITVGVGIPALMCFVGLLCFLCGRV 238 Query: 510 NNRADIQPHNARSLP----TTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDST 343 + R P T+ ++PQP A VMGLD TI+SYP VLGES+RLPKP D+T Sbjct: 239 ------KAFGGRRRPIAEFTSMVTPQPTA-VMGLDGPTIESYPKVVLGESRRLPKPDDNT 291 Query: 342 CAICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSP 205 C+ICLSEY+P +TL+ +PEC H FHS CIDEWL LNA+CP+CRNSP Sbjct: 292 CSICLSEYRPKETLKIIPECQHCFHSECIDEWLHLNASCPICRNSP 337 Score = 77.4 bits (189), Expect = 8e-12 Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 16/228 (7%) Frame = -1 Query: 1149 VRFPFRLVGRQPRECGYPGFELFCNNKSQLLLNLPFAGEFVVTDINYSLQTIYFK-PEFC 973 +RFPFRL QP CGYPGFEL C K Q +L+LP++ + +V I+Y+ Q I + P+ C Sbjct: 495 IRFPFRLKD-QPDHCGYPGFELSCTEKKQTVLDLPYSVKLLVKKIDYTTQEIRVQDPDNC 553 Query: 972 PPNSILSFSPFVSPFIDGI------LTEYTFFNCSSSRFFPVAEPFEV--LGCFGDRNNT 817 P + + SPF + ++TF NCS ++ A + + + C N Sbjct: 554 LPRQLQNLDLAGSPFQFELENSWDYFRDFTFVNCSVNK---SANQYNLRSIPCLSVPGNL 610 Query: 816 IVTVQSKYYNGFRDRSLPESCRSDSGTAEILE------GFRWGLPVCRVCERENRTCGFR 655 + + S G D S SCR + W +C CE E + C + Sbjct: 611 VYAILSNADLGDFDLS---SCRKIYNISLPYRMSNNSFPMSWSKSICGKCEAEGKKCRLK 667 Query: 654 NVDTLEV-GCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKRK 514 + +T V C+ K+ G +VG+ + + +++ Y K K Sbjct: 668 SNNTEPVTECIEKPKT--------GSIVGSFLLVLVVIVLYYVYTKNK 707 >emb|CBI23148.3| unnamed protein product [Vitis vinifera] Length = 381 Score = 256 bits (655), Expect = 7e-66 Identities = 144/346 (41%), Positives = 190/346 (54%), Gaps = 19/346 (5%) Frame = -1 Query: 1185 CQPTSCTPSGLPVRFPFRLVGRQPRECGYPGFELFCNNKSQLLLNLPFAGEFVVTDINYS 1006 C+ +SC S L +RFPFRL QP CGYPGF+L C+ Q +L LP +GEF V I+Y Sbjct: 37 CEKSSCHRSELEIRFPFRLEDHQPESCGYPGFDLSCDATMQTILKLP-SGEFSVQGIDYG 95 Query: 1005 LQTIYFK-PEFCPPNSILSFSPFVSPFIDGILTEYTFFNCSSSRFFPVAEPFEVLGCFGD 829 Q I+ P+ C P ILS + S F Y+FF CS+ + + C D Sbjct: 96 TQEIWINDPKNCLPRLILSLNLSGSSFRGVYYHNYSFFKCSADY------RLDSIACLSD 149 Query: 828 RNNTIVTVQSKYYNGFRD------------RSLP--ESCRSDSGTAEILEGFRWGLPVCR 691 N T+ S F LP + + ++++L WG P C Sbjct: 150 DNYTVFATDSSRVINFLSPVCDLIKSVMVPAELPFYDPVWTSDLSSDLL--LSWGAPRCG 207 Query: 690 VCERENRTCGFRNVDTLEVGCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKRKI 511 CE E CGFR+ +LE+GC K GL TA+Y I VG G+P + + L + ++ Sbjct: 208 DCEMEGGRCGFRSNSSLEIGCFDVPKRGLPRTARYAITVGVGIPALMCFVGLLCFLCGRV 267 Query: 510 NNRADIQPHNARSLP----TTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDST 343 + R P T+ ++PQP A VMGLD TI+SYP VLGES+RLPKP D+T Sbjct: 268 ------KAFGGRRRPIAEFTSMVTPQPTA-VMGLDGPTIESYPKVVLGESRRLPKPDDNT 320 Query: 342 CAICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSP 205 C+ICLSEY+P +TL+ +PEC H FHS CIDEWL LNA+CP+CRNSP Sbjct: 321 CSICLSEYRPKETLKIIPECQHCFHSECIDEWLHLNASCPICRNSP 366 >ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis sativus] gi|449505086|ref|XP_004162372.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis sativus] Length = 393 Score = 250 bits (638), Expect = 7e-64 Identities = 143/345 (41%), Positives = 200/345 (57%), Gaps = 17/345 (4%) Frame = -1 Query: 1185 CQPTSCTPSGLP-VRFPFRLVGRQPRECGY-PGFELFCNNKSQLLLNLPFAGEFVVTDIN 1012 C+ +SC+ P VRFPFRL Q CGY P F+LFCN ++Q +L+LP AG+ V ++ Sbjct: 25 CKTSSCSGRLTPEVRFPFRLKNSQDSRCGYQPDFDLFCNKRNQTILSLPNAGDVKVEIVD 84 Query: 1011 YSLQTIYFK-PEFCPPNSIL--SFSPFVSPFIDGI-LTEYTFFNCSSSRFFPVAEPFEV- 847 Y Q ++ P+ C P IL SFS SPFI L ++T NCS ++ PF+ Sbjct: 85 YKFQRLWINDPDQCFPKRILMDSFSLEDSPFIYNYRLDKFTVLNCS---YYVETLPFDRV 141 Query: 846 --LGCFGDRNNTIVTVQSKYYNGFRDRSLPESCRSDSGTA------EILEGF--RWGLPV 697 + C N +++ V + + LP C+ + E+ EG RW P Sbjct: 142 RRIKCMSGANYSVINVPDRDLKAVTNL-LPTPCKVITTKKLPLTGMELEEGMVVRWSEPE 200 Query: 696 CRVCERENRTCGFRNVDTLEVGCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKR 517 C CE CGFR+ + EV C KSG+ AKYG+++G G+PG+ LI L Y Sbjct: 201 CGNCELRGGDCGFRSNSSDEVVCFNLPKSGIPRGAKYGLIIGVGIPGLLFLIGLVFYICG 260 Query: 516 KINNRADIQPHNARSLPTTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDSTCA 337 K +A +P+ S + ++ +P + GLD TI+S+P T LG+S+RLPK +D+TCA Sbjct: 261 KC--KAFARPNRPTSNLSLSLGHEPTSTKAGLDGPTIESFPKTTLGQSRRLPKSNDTTCA 318 Query: 336 ICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSPD 202 ICLSEYQ +T+RT+P+C H+FH+ C+DEWLKLNATCPVCR SPD Sbjct: 319 ICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNATCPVCRTSPD 363