BLASTX nr result

ID: Bupleurum21_contig00023078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023078
         (1314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509961.1| ring finger protein, putative [Ricinus commu...   274   4e-71
ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|2...   260   6e-67
ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262...   256   7e-66
emb|CBI23148.3| unnamed protein product [Vitis vinifera]              256   7e-66
ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein A...   250   7e-64

>ref|XP_002509961.1| ring finger protein, putative [Ricinus communis]
            gi|223549860|gb|EEF51348.1| ring finger protein, putative
            [Ricinus communis]
          Length = 392

 Score =  274 bits (700), Expect = 4e-71
 Identities = 158/355 (44%), Positives = 206/355 (58%), Gaps = 18/355 (5%)
 Frame = -1

Query: 1185 CQPTSCTPSGLPVRFPFRLVGRQPRECGYPGFELFCNNKSQLLLNLPFAGEFVVTDINYS 1006
            CQ  SC+ +G  +RFPF L G +   C YPGF L C+   Q +L LP AG F+V  I+YS
Sbjct: 22   CQE-SCSRTGQEIRFPFGLTGGR---CSYPGFNLSCSAGDQTILALPRAGNFIVQFIDYS 77

Query: 1005 LQTIYFK-PEFCPPNSIL-SFSPFVSPFIDGILTEYTFFNCSSS---RFFPVAEPFEVLG 841
             Q IY + P  C     L +FS   SPFI  I   +TF NCSS+    F P +     + 
Sbjct: 78   AQQIYIRDPGNCIAERFLKNFSLSGSPFIAEIYRSFTFLNCSSNFSASFLPPSS--RKVK 135

Query: 840  CFGDRNNTIVTVQSKYYNGFRDRSLPESCRSDSGTAEI-------LEG---FRWGLPVCR 691
            C    N+T+V + + Y  G+   S P SC   +   E+        EG     W  P CR
Sbjct: 136  CLSSENSTVVALLNSYDQGYEPSSFP-SCTVMAKRVEVPVSWYRWAEGDASLTWTKPDCR 194

Query: 690  VCERENRTCGFRNVDTLEVGC--LGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKR 517
             CE    TCGF+    L++GC  L  SK  L  +AKYGI++G G+PG+  +I L  Y   
Sbjct: 195  SCEERGGTCGFKGDTGLDIGCFDLPRSKRALPRSAKYGIIIGIGIPGLLCIIGLGCYVAG 254

Query: 516  KINN-RADIQPHNARSLPTTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDSTC 340
            ++   R  +  H++ +L   T   QP   V G+D  T++ YP T+LGES+RLPKP+D+TC
Sbjct: 255  RVGTYRRSL--HSSTAL-NATFPRQPSMAVTGIDGATLELYPKTLLGESRRLPKPNDNTC 311

Query: 339  AICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSPDGLFGRVATP 175
             ICL EYQP +TLRT+PECNHYFH+ CIDEWLK+NATCP+CRNSPD     VATP
Sbjct: 312  PICLCEYQPKETLRTIPECNHYFHADCIDEWLKMNATCPLCRNSPD--VSSVATP 364


>ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|222845233|gb|EEE82780.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  260 bits (664), Expect = 6e-67
 Identities = 146/348 (41%), Positives = 196/348 (56%), Gaps = 18/348 (5%)
 Frame = -1

Query: 1188 TCQPTSCTPSGLPVRFPFRLVGRQPRECGYPGFELFCNNKSQLL-LNLPFAGEFVVTDIN 1012
            TC    C  + L VRFPF   G     C YPGF+L C++K+Q++ L+LP  G F V +IN
Sbjct: 22   TCH-NPCLRNSLEVRFPF---GFDNNRCSYPGFKLSCDSKTQIITLDLPNIGNFTVRNIN 77

Query: 1011 YSLQTIYFK-PEFCPPNSIL--SFSPFVSPFIDGILTEY-----TFFNCSSSRFFPVAEP 856
            Y  QT+    P+ C     +  SF    SPF    + EY     TF NCS++    V   
Sbjct: 78   YGSQTVTITDPQNCLAKKFIDSSFDLSGSPFN---IPEYYNHFFTFLNCSTNST-TVISG 133

Query: 855  FEVLGCFGDRNNTIVTVQSKYYNGFRDRSLPESCRSDSGTAEILEGFRWG---------L 703
               + C  + N T+VT+ +  Y  F D  +P  C        +   +RW           
Sbjct: 134  IRRVNCLSNENFTVVTLPTNIYESFPD-FMPPFCTELKKRVAVPPWYRWSDSETRLIWNE 192

Query: 702  PVCRVCERENRTCGFRNVDTLEVGCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYA 523
            P C  CE +  TC F+    L + C G SK  L  +AKYGI++GAG+PG+  +I + +Y 
Sbjct: 193  PYCLPCEVDGGTCQFKGNTGLTIDCNGRSKGPLPRSAKYGIIIGAGIPGLLCIIGIVSYV 252

Query: 522  KRKINNRADIQPHNARSLPTTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDST 343
              ++  R+           +T+++PQP   V GLD  TI+SYP T LG+S RLPKP+D+T
Sbjct: 253  FGRLKARSSGNEPTMEM--STSVAPQPCVVVTGLDGPTIESYPKTQLGDSGRLPKPNDNT 310

Query: 342  CAICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSPDG 199
            C ICLSEYQP DTLRT+P CNHYFH+ C+DEWLK+NATCP+CRNSPDG
Sbjct: 311  CPICLSEYQPKDTLRTIPNCNHYFHANCVDEWLKMNATCPLCRNSPDG 358


>ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262465 [Vitis vinifera]
          Length = 1054

 Score =  256 bits (655), Expect = 7e-66
 Identities = 144/346 (41%), Positives = 190/346 (54%), Gaps = 19/346 (5%)
 Frame = -1

Query: 1185 CQPTSCTPSGLPVRFPFRLVGRQPRECGYPGFELFCNNKSQLLLNLPFAGEFVVTDINYS 1006
            C+ +SC  S L +RFPFRL   QP  CGYPGF+L C+   Q +L LP +GEF V  I+Y 
Sbjct: 8    CEKSSCHRSELEIRFPFRLEDHQPESCGYPGFDLSCDATMQTILKLP-SGEFSVQGIDYG 66

Query: 1005 LQTIYFK-PEFCPPNSILSFSPFVSPFIDGILTEYTFFNCSSSRFFPVAEPFEVLGCFGD 829
             Q I+   P+ C P  ILS +   S F       Y+FF CS+          + + C  D
Sbjct: 67   TQEIWINDPKNCLPRLILSLNLSGSSFRGVYYHNYSFFKCSADY------RLDSIACLSD 120

Query: 828  RNNTIVTVQSKYYNGFRD------------RSLP--ESCRSDSGTAEILEGFRWGLPVCR 691
             N T+    S     F                LP  +   +   ++++L    WG P C 
Sbjct: 121  DNYTVFATDSSRVINFLSPVCDLIKSVMVPAELPFYDPVWTSDLSSDLL--LSWGAPRCG 178

Query: 690  VCERENRTCGFRNVDTLEVGCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKRKI 511
             CE E   CGFR+  +LE+GC    K GL  TA+Y I VG G+P +   + L  +   ++
Sbjct: 179  DCEMEGGRCGFRSNSSLEIGCFDVPKRGLPRTARYAITVGVGIPALMCFVGLLCFLCGRV 238

Query: 510  NNRADIQPHNARSLP----TTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDST 343
                  +    R  P    T+ ++PQP A VMGLD  TI+SYP  VLGES+RLPKP D+T
Sbjct: 239  ------KAFGGRRRPIAEFTSMVTPQPTA-VMGLDGPTIESYPKVVLGESRRLPKPDDNT 291

Query: 342  CAICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSP 205
            C+ICLSEY+P +TL+ +PEC H FHS CIDEWL LNA+CP+CRNSP
Sbjct: 292  CSICLSEYRPKETLKIIPECQHCFHSECIDEWLHLNASCPICRNSP 337



 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 16/228 (7%)
 Frame = -1

Query: 1149 VRFPFRLVGRQPRECGYPGFELFCNNKSQLLLNLPFAGEFVVTDINYSLQTIYFK-PEFC 973
            +RFPFRL   QP  CGYPGFEL C  K Q +L+LP++ + +V  I+Y+ Q I  + P+ C
Sbjct: 495  IRFPFRLKD-QPDHCGYPGFELSCTEKKQTVLDLPYSVKLLVKKIDYTTQEIRVQDPDNC 553

Query: 972  PPNSILSFSPFVSPFIDGI------LTEYTFFNCSSSRFFPVAEPFEV--LGCFGDRNNT 817
             P  + +     SPF   +        ++TF NCS ++    A  + +  + C     N 
Sbjct: 554  LPRQLQNLDLAGSPFQFELENSWDYFRDFTFVNCSVNK---SANQYNLRSIPCLSVPGNL 610

Query: 816  IVTVQSKYYNGFRDRSLPESCRSDSGTAEILE------GFRWGLPVCRVCERENRTCGFR 655
            +  + S    G  D S   SCR     +             W   +C  CE E + C  +
Sbjct: 611  VYAILSNADLGDFDLS---SCRKIYNISLPYRMSNNSFPMSWSKSICGKCEAEGKKCRLK 667

Query: 654  NVDTLEV-GCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKRK 514
            + +T  V  C+   K+        G +VG+ +  + +++    Y K K
Sbjct: 668  SNNTEPVTECIEKPKT--------GSIVGSFLLVLVVIVLYYVYTKNK 707


>emb|CBI23148.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  256 bits (655), Expect = 7e-66
 Identities = 144/346 (41%), Positives = 190/346 (54%), Gaps = 19/346 (5%)
 Frame = -1

Query: 1185 CQPTSCTPSGLPVRFPFRLVGRQPRECGYPGFELFCNNKSQLLLNLPFAGEFVVTDINYS 1006
            C+ +SC  S L +RFPFRL   QP  CGYPGF+L C+   Q +L LP +GEF V  I+Y 
Sbjct: 37   CEKSSCHRSELEIRFPFRLEDHQPESCGYPGFDLSCDATMQTILKLP-SGEFSVQGIDYG 95

Query: 1005 LQTIYFK-PEFCPPNSILSFSPFVSPFIDGILTEYTFFNCSSSRFFPVAEPFEVLGCFGD 829
             Q I+   P+ C P  ILS +   S F       Y+FF CS+          + + C  D
Sbjct: 96   TQEIWINDPKNCLPRLILSLNLSGSSFRGVYYHNYSFFKCSADY------RLDSIACLSD 149

Query: 828  RNNTIVTVQSKYYNGFRD------------RSLP--ESCRSDSGTAEILEGFRWGLPVCR 691
             N T+    S     F                LP  +   +   ++++L    WG P C 
Sbjct: 150  DNYTVFATDSSRVINFLSPVCDLIKSVMVPAELPFYDPVWTSDLSSDLL--LSWGAPRCG 207

Query: 690  VCERENRTCGFRNVDTLEVGCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKRKI 511
             CE E   CGFR+  +LE+GC    K GL  TA+Y I VG G+P +   + L  +   ++
Sbjct: 208  DCEMEGGRCGFRSNSSLEIGCFDVPKRGLPRTARYAITVGVGIPALMCFVGLLCFLCGRV 267

Query: 510  NNRADIQPHNARSLP----TTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDST 343
                  +    R  P    T+ ++PQP A VMGLD  TI+SYP  VLGES+RLPKP D+T
Sbjct: 268  ------KAFGGRRRPIAEFTSMVTPQPTA-VMGLDGPTIESYPKVVLGESRRLPKPDDNT 320

Query: 342  CAICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSP 205
            C+ICLSEY+P +TL+ +PEC H FHS CIDEWL LNA+CP+CRNSP
Sbjct: 321  CSICLSEYRPKETLKIIPECQHCFHSECIDEWLHLNASCPICRNSP 366


>ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
            sativus] gi|449505086|ref|XP_004162372.1| PREDICTED:
            putative RING-H2 finger protein ATL21A-like [Cucumis
            sativus]
          Length = 393

 Score =  250 bits (638), Expect = 7e-64
 Identities = 143/345 (41%), Positives = 200/345 (57%), Gaps = 17/345 (4%)
 Frame = -1

Query: 1185 CQPTSCTPSGLP-VRFPFRLVGRQPRECGY-PGFELFCNNKSQLLLNLPFAGEFVVTDIN 1012
            C+ +SC+    P VRFPFRL   Q   CGY P F+LFCN ++Q +L+LP AG+  V  ++
Sbjct: 25   CKTSSCSGRLTPEVRFPFRLKNSQDSRCGYQPDFDLFCNKRNQTILSLPNAGDVKVEIVD 84

Query: 1011 YSLQTIYFK-PEFCPPNSIL--SFSPFVSPFIDGI-LTEYTFFNCSSSRFFPVAEPFEV- 847
            Y  Q ++   P+ C P  IL  SFS   SPFI    L ++T  NCS   ++    PF+  
Sbjct: 85   YKFQRLWINDPDQCFPKRILMDSFSLEDSPFIYNYRLDKFTVLNCS---YYVETLPFDRV 141

Query: 846  --LGCFGDRNNTIVTVQSKYYNGFRDRSLPESCRSDSGTA------EILEGF--RWGLPV 697
              + C    N +++ V  +      +  LP  C+  +         E+ EG   RW  P 
Sbjct: 142  RRIKCMSGANYSVINVPDRDLKAVTNL-LPTPCKVITTKKLPLTGMELEEGMVVRWSEPE 200

Query: 696  CRVCERENRTCGFRNVDTLEVGCLGPSKSGLSTTAKYGIVVGAGVPGIFLLICLAAYAKR 517
            C  CE     CGFR+  + EV C    KSG+   AKYG+++G G+PG+  LI L  Y   
Sbjct: 201  CGNCELRGGDCGFRSNSSDEVVCFNLPKSGIPRGAKYGLIIGVGIPGLLFLIGLVFYICG 260

Query: 516  KINNRADIQPHNARSLPTTTISPQPPAFVMGLDKLTIDSYPMTVLGESKRLPKPSDSTCA 337
            K   +A  +P+   S  + ++  +P +   GLD  TI+S+P T LG+S+RLPK +D+TCA
Sbjct: 261  KC--KAFARPNRPTSNLSLSLGHEPTSTKAGLDGPTIESFPKTTLGQSRRLPKSNDTTCA 318

Query: 336  ICLSEYQPNDTLRTVPECNHYFHSTCIDEWLKLNATCPVCRNSPD 202
            ICLSEYQ  +T+RT+P+C H+FH+ C+DEWLKLNATCPVCR SPD
Sbjct: 319  ICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNATCPVCRTSPD 363


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