BLASTX nr result

ID: Bupleurum21_contig00023077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00023077
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_002309697.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
ref|XP_002337359.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-28
ref|XP_002515381.1| conserved hypothetical protein [Ricinus comm...   128   6e-28
ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266...   125   5e-27

>ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|222866372|gb|EEF03503.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  142 bits (358), Expect = 4e-32
 Identities = 71/124 (57%), Positives = 87/124 (70%)
 Frame = -2

Query: 465 RSAWHSPVPYLFGGLAAMLGLIVFALLILACSYWKLSGRMEEEENRRDLEAGDEKPPVKD 286
           RS WHSPVPYLFGGLAAMLGLI FALLILACSYW++SGR++ E    DLE+G+EK   K 
Sbjct: 30  RSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRISGRLDSENEGNDLESGNEKEG-KP 88

Query: 285 FPAVFEEKIVVIMAGDVKPTFLATPLCCNKGGVCVKDESKETEKVGQVNGTEPEKLPEQE 106
              VFEEK +VIMAG+ KPTFLATP+C        K +++E  K G       +K+  QE
Sbjct: 89  ENKVFEEKFLVIMAGNEKPTFLATPVCSKASSFVAKIDNQEEAKTGSTPTGHDDKVKNQE 148

Query: 105 MVGN 94
           M+G+
Sbjct: 149 MIGD 152


>ref|XP_002309697.1| predicted protein [Populus trichocarpa] gi|222855673|gb|EEE93220.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  131 bits (330), Expect = 7e-29
 Identities = 73/133 (54%), Positives = 91/133 (68%), Gaps = 9/133 (6%)
 Frame = -2

Query: 465 RSAWHSPVPYLFGGLAAMLGLIVFALLILACSYWKLSGRMEEE---ENRRDLEAGDEKP- 298
           RS WHSPVPYLFGGLAAMLGLI FALLILACSYW+LS R++ E    ++RDLE+G+EK  
Sbjct: 27  RSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSRLDSENEGNDQRDLESGNEKEG 86

Query: 297 --PVKDFPAVFEEKIVVIMAGDVKPTFLATPLC---CNKGGVCVKDESKETEKVGQVNGT 133
             P K    V+EEK +VIMAG+ KPTFLATP+C    + G      E ++TE  G     
Sbjct: 87  SNPGKAEKRVYEEKFLVIMAGNQKPTFLATPVCSKVSSSGAQIDNQEEEKTESTG----- 141

Query: 132 EPEKLPEQEMVGN 94
           +  KL  +EM+G+
Sbjct: 142 DHYKLKNEEMIGD 154


>ref|XP_002337359.1| predicted protein [Populus trichocarpa] gi|222838907|gb|EEE77258.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  130 bits (327), Expect = 2e-28
 Identities = 73/133 (54%), Positives = 90/133 (67%), Gaps = 9/133 (6%)
 Frame = -2

Query: 465 RSAWHSPVPYLFGGLAAMLGLIVFALLILACSYWKLSGRMEEE---ENRRDLEAGDEKP- 298
           RS WHSPVPYLFGGLAAMLGLI FALLILACSYW+LS R++ E    ++RDLE+G+EK  
Sbjct: 17  RSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSRLDSENEGNDQRDLESGNEKEG 76

Query: 297 --PVKDFPAVFEEKIVVIMAGDVKPTFLATPLC---CNKGGVCVKDESKETEKVGQVNGT 133
             P K    V+EEK +VIMAG+ KPTFLATP+C    + G      E ++TE  G     
Sbjct: 77  SNPGKAEKRVYEEKFLVIMAGNQKPTFLATPVCSKVSSSGAQIDNQEEEKTESTG----- 131

Query: 132 EPEKLPEQEMVGN 94
           +  KL  +EM G+
Sbjct: 132 DHYKLKNEEMTGD 144


>ref|XP_002515381.1| conserved hypothetical protein [Ricinus communis]
           gi|223545325|gb|EEF46830.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  128 bits (322), Expect = 6e-28
 Identities = 73/124 (58%), Positives = 84/124 (67%), Gaps = 13/124 (10%)
 Frame = -2

Query: 468 QRSAWHSPVPYLFGGLAAMLGLIVFALLILACSYWKLSGRMEEEENRR---DLEAGDEKP 298
           QRS WHSPVPYLFGGLAAMLGLI FALLILACSYW+LSGR++  E      DLE G+EK 
Sbjct: 27  QRSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGRVDNREGSHGGDDLENGNEKE 86

Query: 297 PVKDFPA----VFEEKIVVIMAGDVKPTFLATPLCC------NKGGVCVKDESKETEKVG 148
              +  A    V+EEKI+VIMAGD KPTFLATP+        +K     K ESK+TE  G
Sbjct: 87  GGANKAAGNDKVYEEKILVIMAGDQKPTFLATPVSSRAPSFGDKSSKIEKTESKKTENEG 146

Query: 147 QVNG 136
           +  G
Sbjct: 147 KTKG 150


>ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera]
          Length = 156

 Score =  125 bits (314), Expect = 5e-27
 Identities = 75/136 (55%), Positives = 88/136 (64%), Gaps = 10/136 (7%)
 Frame = -2

Query: 462 SAWHSPVPYLFGGLAAMLGLIVFALLILACSYWKLSGRMEEEEN--RRDLEAGD------ 307
           S WHSPVPYLFGGLAAMLGLI FALLILACSYWKLSG +E +++   RD EAGD      
Sbjct: 23  SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGDDDSVARDAEAGDGAGGDA 82

Query: 306 EKPPVKDFPAVFEEKIVVIMAGDVKPTFLATPLC--CNKGGVCVKDESKETEKVGQVNGT 133
            KPP+      FEEKI+VIMAGDVKPT+LATP+    +  G    + S+ TEK   V  +
Sbjct: 83  VKPPM-----AFEEKILVIMAGDVKPTYLATPMSSRASSFGERSSNNSEMTEKSEAVAES 137

Query: 132 EPEKLPEQEMVGNQES 85
             +    Q   GN ES
Sbjct: 138 PKQGSENQVQTGNGES 153


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